Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40197
         (844 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75954-7|CAB00106.2|  492|Caenorhabditis elegans Hypothetical pr...    71   1e-12
Z81449-4|CAB03765.1|  811|Caenorhabditis elegans Hypothetical pr...    32   0.44 
AL132860-3|CAB60514.2|  342|Caenorhabditis elegans Hypothetical ...    29   3.1  
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc...    29   4.1  
U67864-1|AAC47313.1|  415|Caenorhabditis elegans MEX-3 protein.        28   7.2  
AL032626-27|CAA21541.1|  271|Caenorhabditis elegans Hypothetical...    28   7.2  
AF125450-3|AAD12817.1|  309|Caenorhabditis elegans Hypothetical ...    28   7.2  
AF003139-9|AAK73872.1|  415|Caenorhabditis elegans Muscle excess...    28   7.2  
AF003139-8|AAK73873.2|  443|Caenorhabditis elegans Muscle excess...    28   7.2  
AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical...    28   9.5  

>Z75954-7|CAB00106.2|  492|Caenorhabditis elegans Hypothetical
           protein F58H1.3a protein.
          Length = 492

 Score = 70.9 bits (166), Expect = 1e-12
 Identities = 28/55 (50%), Positives = 42/55 (76%)
 Frame = +2

Query: 335 KEDQIEGLVKNVKWQMSSDRKVAPLKQLQGLIWKKGYDKGDIKGHVYDDVLPALE 499
           +++ IE + KNV+  +  D+K+ P+K LQGLIW++ Y +GD+KGHVY DVLP L+
Sbjct: 78  RKECIEDVTKNVRHWIKRDKKLTPMKALQGLIWEEAYQRGDVKGHVYPDVLPVLK 132



 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 34/59 (57%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
 Frame = +1

Query: 511 VEGQKI--YIYSSGSVQAQKLLFGQSSAGDLLPLIDGHFDTAVGAKQEATSYTAIVEKI 681
           VE +KI  YIYSSGSV AQKLLF  S  GD+  ++ G+FDT +G K E+ SYT I E+I
Sbjct: 134 VENRKIPIYIYSSGSVHAQKLLFANSIEGDMTKILYGYFDTNIGLKGESNSYTKISERI 192



 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 26/37 (70%), Positives = 32/37 (86%)
 Frame = +3

Query: 123 LLLDIEGTTTSISFVKDKLFPYAEENVKDFLDAQWDD 233
           LLLDIEGT TSISFVKD+LFPYA ENV ++L+  +D+
Sbjct: 11  LLLDIEGTITSISFVKDELFPYAFENVGNYLEEHYDN 47


>Z81449-4|CAB03765.1|  811|Caenorhabditis elegans Hypothetical
           protein C46F11.4 protein.
          Length = 811

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +2

Query: 281 DQEKSVEGLVTIPGEDASKEDQIEGLVKNVKWQMSSDRKVAPLKQ 415
           D EK       +  +D  +ED+++  +  ++ Q SSD+KV+  K+
Sbjct: 100 DDEKPASSSSKLAADDDDEEDELDAFMAGIEKQASSDKKVSEQKE 144


>AL132860-3|CAB60514.2|  342|Caenorhabditis elegans Hypothetical
           protein Y56A3A.4 protein.
          Length = 342

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +3

Query: 96  GDIVKKSKV--LLLDIEGTTTSISFVKDKLFPYAEENVKDFLD 218
           G I++KSK+  L+  I  TT     VKD L  YA++ V   +D
Sbjct: 226 GSIMEKSKLDDLMQQISSTTVLEENVKDVLVEYADDFVSSLID 268


>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase
           associated protein homologprotein 1, isoform a protein.
          Length = 1256

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
 Frame = +2

Query: 341 DQIEG-LVKNVKWQMSSDRKVAPLKQLQGLIWKKGYDKGDIKGHV--YDDVL-PALEQW 505
           D + G L+KN     SS +KV  + Q +        D G++  HV  YDD +   L  W
Sbjct: 773 DNLHGILIKNPSLHRSSSKKVVFIDQNKASAAASAGDSGEVPAHVRAYDDAIEEPLANW 831


>U67864-1|AAC47313.1|  415|Caenorhabditis elegans MEX-3 protein.
          Length = 415

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = -3

Query: 692 ALQPIFSTMAV*LVASCLAPTAVSKWPSMRGSRSPADDWPKRSFW 558
           AL   F +M   L    L+ T +S  PS+ G +S   D P   +W
Sbjct: 276 ALLRSFPSMRSSLTPESLSGTGLSSRPSLGGGQSAKQDLPTYDYW 320


>AL032626-27|CAA21541.1|  271|Caenorhabditis elegans Hypothetical
           protein Y37D8A.17 protein.
          Length = 271

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
 Frame = -2

Query: 792 PFRGFT*SQRPLPLVRAASASFFKYQLKTRISFSFA--TDFLDNGSVTGSFLFSTYSSV 622
           PF G   +      + AASA+ F  +L TRI   FA    F+    +  SF +  YS V
Sbjct: 68  PFIGLVPAHSAYYKIFAASAATFALRLHTRIQGQFALNAQFIQRLIIEDSFHYLVYSVV 126


>AF125450-3|AAD12817.1|  309|Caenorhabditis elegans Hypothetical
           protein Y39F10A.3 protein.
          Length = 309

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 535 YSSGSVQAQKLLFGQSSAGDLLPLIDG 615
           YS+G V  +K + GQ S+ D  PL+ G
Sbjct: 78  YSTGQVTTRKSVLGQVSSADQFPLLYG 104


>AF003139-9|AAK73872.1|  415|Caenorhabditis elegans Muscle excess
           protein 3, isoform a protein.
          Length = 415

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = -3

Query: 692 ALQPIFSTMAV*LVASCLAPTAVSKWPSMRGSRSPADDWPKRSFW 558
           AL   F +M   L    L+ T +S  PS+ G +S   D P   +W
Sbjct: 276 ALLRSFPSMRSSLTPESLSGTGLSSRPSLGGGQSAKQDLPTYDYW 320


>AF003139-8|AAK73873.2|  443|Caenorhabditis elegans Muscle excess
           protein 3, isoform b protein.
          Length = 443

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = -3

Query: 692 ALQPIFSTMAV*LVASCLAPTAVSKWPSMRGSRSPADDWPKRSFW 558
           AL   F +M   L    L+ T +S  PS+ G +S   D P   +W
Sbjct: 304 ALLRSFPSMRSSLTPESLSGTGLSSRPSLGGGQSAKQDLPTYDYW 348


>AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical
           protein Y43F8B.3a protein.
          Length = 1816

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 31/134 (23%), Positives = 50/134 (37%), Gaps = 2/134 (1%)
 Frame = -2

Query: 564 FLGLDGSRGVDVNLLTLY*RHCSRAGSTSSYTCPLMSPLS*PFFQISPWSCFRGATLRSD 385
           +LGL G+R    N  +    HC       +  C +  P+        P+ C +GAT  + 
Sbjct: 504 YLGLKGNRN---NFQSK--EHCESTCPVWTNPCAIGQPIM--TVGQKPFQCHQGATCSTG 556

Query: 384 DICHLTFLTRPSI*SSLEASSPGMVTSPSTLFS*SSIASFLKASXXXXXXXXPTGHQENL 205
             CHL +    ++    E     +V    +     S   F  ++         TG   N 
Sbjct: 557 YFCHLGYDDATTVCCQSEGDPCSLVVKEGSGNHHLS-RWFYNSNTRQCQPFTYTGQGGNE 615

Query: 204 SHFL--QHKEIVCP 169
           ++FL  +H E  CP
Sbjct: 616 NNFLLREHCEATCP 629


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,297,551
Number of Sequences: 27780
Number of extensions: 422451
Number of successful extensions: 1183
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1183
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)