Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40195
(835 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 169 7e-41
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 156 6e-37
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 147 3e-34
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 138 1e-31
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 133 5e-30
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 130 3e-29
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 107 4e-22
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 103 4e-21
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 99 2e-19
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 89 1e-16
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 84 4e-15
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 83 6e-15
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 78 2e-13
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 78 3e-13
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 78 3e-13
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 77 7e-13
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 75 2e-12
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 74 5e-12
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 74 5e-12
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 72 2e-11
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 71 5e-11
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 69 1e-10
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 69 2e-10
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 69 2e-10
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 68 3e-10
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 68 3e-10
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 67 4e-10
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 67 4e-10
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 67 6e-10
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 65 2e-09
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 65 2e-09
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 63 7e-09
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 62 2e-08
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 60 5e-08
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 59 1e-07
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 58 2e-07
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 57 6e-07
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 54 3e-06
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 54 6e-06
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 53 1e-05
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 52 2e-05
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 52 2e-05
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 51 3e-05
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 51 3e-05
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 50 7e-05
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 49 1e-04
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 49 1e-04
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 49 2e-04
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 48 4e-04
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 47 5e-04
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 47 5e-04
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 47 5e-04
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 46 0.001
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 46 0.002
UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3; ... 45 0.002
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 45 0.002
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 45 0.002
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 45 0.002
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 44 0.004
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 44 0.004
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 44 0.005
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 43 0.008
UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2; Mycoplas... 43 0.011
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 41 0.033
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 41 0.033
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 41 0.033
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 40 0.058
UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3; Bacteria... 39 0.13
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 38 0.41
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 38 0.41
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 38 0.41
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.41
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.54
UniRef50_Q1IL98 Cluster: Amino acid transporter; n=1; Acidobacte... 37 0.54
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 37 0.54
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 37 0.72
UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1; Neoricke... 37 0.72
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 36 1.3
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 36 1.7
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 35 2.2
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 35 2.2
UniRef50_Q4S4D0 Cluster: Chromosome 2 SCAF14738, whole genome sh... 35 2.9
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 2.9
UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila pseudoobscu... 34 3.8
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 34 3.8
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 34 5.1
UniRef50_A3VAK2 Cluster: Putative FAD-linked oxidoreductase; n=1... 33 6.7
UniRef50_Q86AL0 Cluster: Similar to Dictyostelium discoideum (Sl... 33 6.7
UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n... 33 8.8
UniRef50_Q38AQ9 Cluster: Putative uncharacterized protein; n=1; ... 33 8.8
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 8.8
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 169 bits (411), Expect = 7e-41
Identities = 78/85 (91%), Positives = 82/85 (96%)
Frame = +2
Query: 254 LDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRG 433
+DFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD NGH+GLGVKCSKEVATAIRG
Sbjct: 94 IDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRG 153
Query: 434 AIILAKLSVLPVRRGYWGNKIGKPH 508
AIILAKLS++PVRRGYWGNKIGKPH
Sbjct: 154 AIILAKLSIVPVRRGYWGNKIGKPH 178
Score = 106 bits (255), Expect = 6e-22
Identities = 48/61 (78%), Positives = 50/61 (81%)
Frame = +1
Query: 499 KATPVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGSTGTFGK 678
K VPCKVTG+CGSV VRLIPAPRGTGIVSAPVPKKLL MAG+ DCYTS RG T T G
Sbjct: 176 KPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGN 235
Query: 679 F 681
F
Sbjct: 236 F 236
Score = 64.1 bits (149), Expect = 4e-09
Identities = 29/41 (70%), Positives = 34/41 (82%)
Frame = +3
Query: 135 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIL 257
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EI+
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEII 94
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 156 bits (379), Expect = 6e-37
Identities = 73/85 (85%), Positives = 77/85 (90%)
Frame = +2
Query: 254 LDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRG 433
+DFFLG SL DEVLKIMPVQKQT AGQ TRFKAFV IGD NGH+GL VKCSKEVATAIRG
Sbjct: 34 IDFFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDYNGHVGLSVKCSKEVATAIRG 93
Query: 434 AIILAKLSVLPVRRGYWGNKIGKPH 508
AIILAKLS++PV RGYWGNKIGKPH
Sbjct: 94 AIILAKLSIVPVCRGYWGNKIGKPH 118
Score = 50.0 bits (114), Expect = 7e-05
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +3
Query: 156 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIL 257
+PVTKLG L+ + KI LE IYLFSLPIKE EI+
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKESEII 34
Score = 39.9 bits (89), Expect = 0.077
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = +1
Query: 499 KATPVPCKVTGKCGSVTVRLIPAP 570
K VPCKVTG+C SV V LIPAP
Sbjct: 116 KPHTVPCKVTGRCSSVLVHLIPAP 139
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 147 bits (356), Expect = 3e-34
Identities = 63/85 (74%), Positives = 78/85 (91%)
Frame = +2
Query: 254 LDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRG 433
+D+FL P LNDEV+K++PVQKQTRAGQRTRFKAFV IGD++GH+GLG+KC+KEVATAIRG
Sbjct: 68 VDYFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDSDGHVGLGIKCAKEVATAIRG 126
Query: 434 AIILAKLSVLPVRRGYWGNKIGKPH 508
AII+ KLS++P+RRGYWG +G PH
Sbjct: 127 AIIMGKLSIMPIRRGYWGTALGDPH 151
Score = 95.5 bits (227), Expect = 1e-18
Identities = 40/57 (70%), Positives = 49/57 (85%)
Frame = +1
Query: 511 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGSTGTFGKF 681
VP KV+GKCGSVTVRL+PAPRG G+V+APV K+ LQ+AG++DCYT +RGST T G F
Sbjct: 153 VPVKVSGKCGSVTVRLVPAPRGAGLVAAPVTKRFLQLAGIEDCYTQSRGSTKTLGNF 209
Score = 66.9 bits (156), Expect = 6e-10
Identities = 27/41 (65%), Positives = 37/41 (90%)
Frame = +3
Query: 135 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIL 257
++++KEWVPVTKLGRLV+ GKI +E IYL+SLPIKE++I+
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKEYQIV 68
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 138 bits (335), Expect = 1e-31
Identities = 65/75 (86%), Positives = 70/75 (93%)
Frame = +2
Query: 284 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 463
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 464 PVRRGYWGNKIGKPH 508
P+R+GYWGNKIGKP+
Sbjct: 108 PLRQGYWGNKIGKPN 122
Score = 97.5 bits (232), Expect = 4e-19
Identities = 44/61 (72%), Positives = 47/61 (77%)
Frame = +1
Query: 499 KATPVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGSTGTFGK 678
K VPCKVTG CGSV V LIPAPRGTG+VSAPVPKKLL MAG+ DCYTS R T + G
Sbjct: 120 KPNTVPCKVTGHCGSVLVCLIPAPRGTGMVSAPVPKKLLMMAGIDDCYTSARDCTASLGN 179
Query: 679 F 681
F
Sbjct: 180 F 180
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 133 bits (322), Expect = 5e-30
Identities = 61/100 (61%), Positives = 79/100 (79%), Gaps = 1/100 (1%)
Frame = +2
Query: 212 EHLLVFFTNQRIRDL-DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 388
EH+ +F + + + F+G L DEV+KI PVQKQT AGQR RFKAFV +GD NGHIG
Sbjct: 69 EHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGHIG 128
Query: 389 LGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 508
LGVK KEVA +I+G++ILAKL+++PVRRGYWG+K+G+PH
Sbjct: 129 LGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKLGEPH 168
Score = 75.4 bits (177), Expect = 2e-12
Identities = 35/55 (63%), Positives = 41/55 (74%)
Frame = +1
Query: 511 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGSTGTFG 675
+P KV GKCGSV VRLIPAPRG GIV++ KK+L MAG+ D YT +RG T T G
Sbjct: 170 IPTKVHGKCGSVHVRLIPAPRGAGIVASGTVKKVLAMAGLHDVYTCSRGHTRTLG 224
Score = 59.3 bits (137), Expect = 1e-07
Identities = 26/40 (65%), Positives = 33/40 (82%)
Frame = +3
Query: 138 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIL 257
+D+ WVP TKLGRLV++GKI LE I+LFSLPIKE +I+
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIKEHQIV 84
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 130 bits (315), Expect = 3e-29
Identities = 59/83 (71%), Positives = 70/83 (84%)
Frame = +2
Query: 272 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 451
P L DEV+ I PVQKQTRAGQRTRFKA V +GD+NGH+GLG+K +KEVA AIR II+AK
Sbjct: 74 PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAIRAGIIIAK 133
Query: 452 LSVLPVRRGYWGNKIGKPHPSLA 520
LSV+P+RRGYWG +G+PH SLA
Sbjct: 134 LSVIPIRRGYWGTNLGQPH-SLA 155
Score = 80.6 bits (190), Expect = 4e-14
Identities = 36/50 (72%), Positives = 42/50 (84%)
Frame = +1
Query: 520 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGSTGT 669
K TGKCGSVTVRLIPAPRG+GIV++P KKLLQ+AGV+D YT + G T T
Sbjct: 157 KTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQLAGVEDVYTQSNGKTRT 206
Score = 60.1 bits (139), Expect = 7e-08
Identities = 25/39 (64%), Positives = 33/39 (84%)
Frame = +3
Query: 141 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIL 257
++K WVPVTKLGRLV+ GKI +E I+L SLP+KEF+I+
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKEFQII 69
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 107 bits (256), Expect = 4e-22
Identities = 49/85 (57%), Positives = 59/85 (69%)
Frame = +2
Query: 254 LDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRG 433
+D G S+ +EVL I VQKQTRAGQ+TR KA V +GD GH+G+G K SKE A+AIRG
Sbjct: 55 VDLLCGNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAASAIRG 114
Query: 434 AIILAKLSVLPVRRGYWGNKIGKPH 508
AI AK ++ PVR G W GKPH
Sbjct: 115 AIARAKCAIRPVRLGLWDGAQGKPH 139
Score = 70.5 bits (165), Expect = 5e-11
Identities = 31/61 (50%), Positives = 43/61 (70%)
Frame = +1
Query: 499 KATPVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGSTGTFGK 678
K V CK +GKCG+ V++IPAPRGTGI+S V KK+ ++AG++D YT + G+T T
Sbjct: 137 KPHTVSCKGSGKCGTSVVQVIPAPRGTGIISGSVNKKIFELAGIKDLYTLSFGATSTTEN 196
Query: 679 F 681
F
Sbjct: 197 F 197
Score = 42.3 bits (95), Expect = 0.014
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +3
Query: 135 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIL 257
++++ EW+P T +GRLV+ KI LE I+ FS I+E EI+
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIREPEIV 55
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 103 bits (248), Expect = 4e-21
Identities = 46/58 (79%), Positives = 52/58 (89%)
Frame = +2
Query: 335 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 508
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWGN+I KPH
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEIRKPH 118
Score = 100 bits (240), Expect = 4e-20
Identities = 47/64 (73%), Positives = 51/64 (79%)
Frame = +1
Query: 484 G*QDRKATPVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGST 663
G + RK VP KVTG+CGSV VRLIPAPRGTG VSAPVPKKLL MAG+ DCYTS RG T
Sbjct: 111 GNEIRKPHTVPGKVTGRCGSVLVRLIPAPRGTGFVSAPVPKKLLMMAGIDDCYTSARGHT 170
Query: 664 GTFG 675
T+G
Sbjct: 171 ATWG 174
Score = 33.5 bits (73), Expect = 6.7
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +3
Query: 141 DQKEWVPVTKLGRLVREGKI 200
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 98.7 bits (235), Expect = 2e-19
Identities = 46/64 (71%), Positives = 48/64 (75%)
Frame = +1
Query: 490 QDRKATPVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGSTGT 669
Q R KVTG+CGSV VRLIPAPRGTGIVSAPVPKKLL MAG+ DCYTS RG T T
Sbjct: 115 QTRAGQRTRFKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTAT 174
Query: 670 FGKF 681
G F
Sbjct: 175 LGNF 178
Score = 64.9 bits (151), Expect = 2e-09
Identities = 29/41 (70%), Positives = 34/41 (82%)
Frame = +3
Query: 135 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIL 257
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EI+
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEII 94
Score = 63.3 bits (147), Expect = 7e-09
Identities = 29/32 (90%), Positives = 30/32 (93%)
Frame = +2
Query: 254 LDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 349
+DFFLG SL DEVLKIMPVQKQTRAGQRTRFK
Sbjct: 94 IDFFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 89.4 bits (212), Expect = 1e-16
Identities = 41/46 (89%), Positives = 43/46 (93%)
Frame = +2
Query: 254 LDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 391
+DFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD NGH+GL
Sbjct: 69 IDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGL 114
Score = 64.9 bits (151), Expect = 2e-09
Identities = 29/41 (70%), Positives = 34/41 (82%)
Frame = +3
Query: 135 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIL 257
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EI+
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEII 69
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 84.2 bits (199), Expect = 4e-15
Identities = 40/54 (74%), Positives = 42/54 (77%)
Frame = +1
Query: 520 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGSTGTFGKF 681
KVTG+CGSV VRL APRGTGIVSAPVPKKLL MA + DCYT RG T T G F
Sbjct: 125 KVTGRCGSVLVRLFSAPRGTGIVSAPVPKKLLMMA-IDDCYTLARGCTATLGNF 177
Score = 58.0 bits (134), Expect = 3e-07
Identities = 26/41 (63%), Positives = 31/41 (75%)
Frame = +3
Query: 135 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIL 257
K + KEW+P TKLG LV++ KI LE IYLFSLPIK EI+
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGSEII 94
Score = 56.0 bits (129), Expect = 1e-06
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = +2
Query: 254 LDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 349
+DFFLG SL +EVLK MPVQKQTRAGQ TRFK
Sbjct: 94 IDFFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 83.4 bits (197), Expect = 6e-15
Identities = 43/72 (59%), Positives = 48/72 (66%)
Frame = +1
Query: 466 SSKRLLG*QDRKATPVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYT 645
S ++ LG + K V CKVTG CGSV V LIPA RGTGI SAPVP K L MAG+ DCYT
Sbjct: 1 SVEKPLGNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGTGISSAPVPTKPLMMAGIDDCYT 60
Query: 646 STRGSTGTFGKF 681
S RG T + F
Sbjct: 61 SARGCTASLDYF 72
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 78.2 bits (184), Expect = 2e-13
Identities = 38/57 (66%), Positives = 43/57 (75%)
Frame = +1
Query: 511 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGSTGTFGKF 681
VPC+VTG+CGS+ V LIPAPRGTG VSAPVP KLL MAG+ D +S G T T G F
Sbjct: 156 VPCRVTGRCGSLLVHLIPAPRGTGTVSAPVP-KLLMMAGIDDS-SSASGCTATLGNF 210
Score = 56.0 bits (129), Expect = 1e-06
Identities = 33/68 (48%), Positives = 44/68 (64%)
Frame = +2
Query: 305 PVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYW 484
P+ KQT Q+TRFKA V +G + GH+ LG+K S EV AIILAKLS++PV
Sbjct: 95 PLIKQTCTDQQTRFKASVTVG-SYGHVSLGIKYSMEV------AIILAKLSIIPVETATG 147
Query: 485 GNKIGKPH 508
G ++ +PH
Sbjct: 148 GKRL-EPH 154
Score = 43.6 bits (98), Expect = 0.006
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +3
Query: 144 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEILISSSARP 278
+ +W+P+TKLG LV+E KI LE IY FSL + L S P
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEHP 95
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 77.8 bits (183), Expect = 3e-13
Identities = 45/90 (50%), Positives = 56/90 (62%)
Frame = +2
Query: 254 LDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRG 433
+D FLG +L DEVLK +P QK TR GQ +KA GD NGH+ G+ EVA I+
Sbjct: 82 IDIFLGAALKDEVLKSLPEQKGTRVGQY--YKA----GDYNGHVITGLD---EVANTIQR 132
Query: 434 AIILAKLSVLPVRRGYWGNKIGKPHPSLAR 523
IIL KL ++PV RGY G+K KPH L +
Sbjct: 133 VIILTKLPIVPVWRGYCGSKTSKPHTVLCK 162
Score = 70.9 bits (166), Expect = 4e-11
Identities = 36/58 (62%), Positives = 42/58 (72%)
Frame = +1
Query: 484 G*QDRKATPVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRG 657
G + K V CKVTG GSV++ LIPAPR T I SAP+PKKLL MAG+ DC+TS RG
Sbjct: 150 GSKTSKPHTVLCKVTGH-GSVSLHLIPAPRDTVISSAPMPKKLLMMAGINDCHTSARG 206
Score = 38.7 bits (86), Expect = 0.18
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +3
Query: 159 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIL 257
P +KLG LV++ +I L IYLFSLPIKE EI+
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKETEII 82
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 77.8 bits (183), Expect = 3e-13
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = +2
Query: 254 LDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 388
+DFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D NG+ G
Sbjct: 22 IDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDYNGYAG 66
Score = 44.4 bits (100), Expect = 0.004
Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 6/164 (3%)
Frame = +3
Query: 195 KIDKLESIYLFSLPIKEFEIL---ISSSARP*MMRF*--RSCLYRNKHVPDSAHVS-RHL 356
KI LE IYLFSLPIKE EI+ + +S + +++ R + A V+ R
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 357 LPLATTTVILVWV*SAARKSPLPFEALLSLLSCLFYQFEEVTGVTRSESHTRPLQGHRQV 536
A +L R+ P +L C ++ + + G ++ RPLQG R +
Sbjct: 62 NGYAGRVEVLQ---GGGRRHPRGHHPDQAL-HC--HRAQRLLGEQDRQAPHRPLQGDRPL 115
Query: 537 WFCNSPADSCPSWYWNCVCASS*EASSDGWCTGLLHLNSWFNWH 668
C +W+ + + + EA+ D W LLHL+ + H
Sbjct: 116 RLCAGALHPRAQGHWHRLSSCAQEAAHDSWYLRLLHLSQGLHCH 159
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 76.6 bits (180), Expect = 7e-13
Identities = 40/84 (47%), Positives = 57/84 (67%)
Frame = -1
Query: 508 VWLSDLVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALS 329
V +DLVTPV S++ N QL +D+S ++G G FLAAL QT++ V V +G++ LE L+
Sbjct: 24 VGFTDLVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGLEARTLT 83
Query: 328 GTCLFLYRHDL*NLIIQGRAEEEI 257
GT L L HDL + ++Q A+EEI
Sbjct: 84 GTGLLLDGHDLQHFVLQRAAQEEI 107
Score = 33.5 bits (73), Expect = 6.7
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -3
Query: 254 DLEFFDW*RKQVNALEFVDFSFANKTAEFGDRNPLFLVFL 135
DLE F+ R QV+ L+ D + A++ + G NP VFL
Sbjct: 109 DLELFNGQRVQVDLLQGADLAIAHQATQLGHWNPFLRVFL 148
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 75.4 bits (177), Expect = 2e-12
Identities = 36/95 (37%), Positives = 62/95 (65%)
Frame = +2
Query: 224 VFFTNQRIRDLDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKC 403
+FF N ++ ++ F G SL +V++ + V + T++G++ + K V +GD +GH+GLGVK
Sbjct: 92 IFFHNNKLVNILF--GKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHVGLGVKS 149
Query: 404 SKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 508
S + I+ A+ AKL++ +RRGYW + GKP+
Sbjct: 150 SMDSKAGIKAALRKAKLAITKIRRGYWEIEEGKPN 184
Score = 55.2 bits (127), Expect = 2e-06
Identities = 23/58 (39%), Positives = 39/58 (67%)
Frame = +1
Query: 490 QDRKATPVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGST 663
++ K + K +GK GSV V + PAP+GTGIV++ +L+++G++DC+T + G T
Sbjct: 179 EEGKPNTIKYKTSGKAGSVVVCIKPAPKGTGIVASKFQLNVLKISGIRDCFTKSFGRT 236
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 73.7 bits (173), Expect = 5e-12
Identities = 41/84 (48%), Positives = 53/84 (63%)
Frame = +2
Query: 257 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 436
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 437 IILAKLSVLPVRRGYWGNKIGKPH 508
IIL + S+ G+ GNKI KPH
Sbjct: 55 IILDRSSIAIAWGGWSGNKIAKPH 78
Score = 55.6 bits (128), Expect = 1e-06
Identities = 30/55 (54%), Positives = 35/55 (63%)
Frame = +1
Query: 499 KATPVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGST 663
K V C+VT SV V I APRGT I+SAPVPKKLL+MA + D + RG T
Sbjct: 76 KPHTVSCRVTRLYCSVLVHHISAPRGTDILSAPVPKKLLRMASIDDGDSLARGCT 130
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 73.7 bits (173), Expect = 5e-12
Identities = 32/40 (80%), Positives = 33/40 (82%)
Frame = +1
Query: 562 PAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGSTGTFGKF 681
PAPRGTGIVSAPVPKKLL MAG+ DCYTS RG T T G F
Sbjct: 1 PAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNF 40
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 72.1 bits (169), Expect = 2e-11
Identities = 36/81 (44%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Frame = +2
Query: 272 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 451
P L ++VL + VQ+ ++G+R R++A V +G+ NG++G+G+ SKEV AIR AI AK
Sbjct: 55 PDLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAK 114
Query: 452 LSVLPVR--RGYWGNKIGKPH 508
LS++ VR G W G PH
Sbjct: 115 LSLIKVRVGCGSWECGCGSPH 135
Score = 60.5 bits (140), Expect = 5e-08
Identities = 28/57 (49%), Positives = 36/57 (63%)
Frame = +1
Query: 511 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGSTGTFGKF 681
+P G CGSV V L+PAPRG G+V+ V K +L +AGV+D +T T G T T F
Sbjct: 137 IPFTAKGACGSVKVELLPAPRGVGLVAGNVAKAVLGLAGVKDAWTKTFGDTRTTYNF 193
Score = 33.9 bits (74), Expect = 5.1
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +3
Query: 135 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIL 257
K + + W P T++GR+V+EG I + I LP+ E EI+
Sbjct: 10 KFNTEAWEPKTQIGRMVKEGTISDISYIMDKGLPLLEPEIV 50
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 70.5 bits (165), Expect = 5e-11
Identities = 34/57 (59%), Positives = 39/57 (68%)
Frame = +1
Query: 511 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGSTGTFGKF 681
V CKVTG+C SV + LIP R I+SAPVPKKLL +A + DCYTS RG T T F
Sbjct: 163 VSCKVTGQCVSVLICLIPPTRN--IISAPVPKKLLLLANIDDCYTSARGCTATLDNF 217
Score = 52.4 bits (120), Expect = 1e-05
Identities = 32/64 (50%), Positives = 39/64 (60%)
Frame = +2
Query: 236 NQRIRDLDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 415
N++ + FFL SL DE IMPVQ QT R FK FV+I D + H+ L KCSK+
Sbjct: 87 NKKSMIIGFFLRTSLRDE---IMPVQTQTWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKT 142
Query: 416 ATAI 427
ATAI
Sbjct: 143 ATAI 146
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 68.9 bits (161), Expect = 1e-10
Identities = 66/174 (37%), Positives = 87/174 (50%), Gaps = 1/174 (0%)
Frame = +2
Query: 257 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 436
DFFL SL D+VLKI+P+ + R Q TRF +F I + GH G+GVKCSK+V TA+ +
Sbjct: 27 DFFLEASLKDKVLKIIPLSR-FRNDQWTRFNSFDTI-NYGGHNGIGVKCSKKVGTAVGLS 84
Query: 437 IILAKL-SVLPVRRGYWGNKIGKPHPSLARSPASVVL*QSG*FLPLVVLELCLRQFLRSF 613
+ L S LP R Y GN I KP R+ S+ L +V L R+ +
Sbjct: 85 SWSSFLSSCLP--RDYCGNNIRKPTYPCKRTGWSISF-LFPETLAFIVSVLVPRKLMLRA 141
Query: 614 FRWLVYRTATPQLVVQLAPLGNFAKATYAAIGQDICLPHS*LCLKGTSPLTKSP 775
Y +A V LGN AKAT+ A+ + HS L + TKSP
Sbjct: 142 SIDSCYTSARSYTVT----LGNIAKATFDAVSK---TSHSTPNLWKEAVFTKSP 188
Score = 37.9 bits (84), Expect = 0.31
Identities = 27/60 (45%), Positives = 32/60 (53%)
Frame = +1
Query: 496 RKATPVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGSTGTFG 675
RK T PCK TG S++ L P IVS VP+KL+ A + CYTS R T T G
Sbjct: 104 RKPT-YPCKRTG--WSISF-LFPETLAF-IVSVLVPRKLMLRASIDSCYTSARSYTVTLG 158
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 68.5 bits (160), Expect = 2e-10
Identities = 35/59 (59%), Positives = 45/59 (76%)
Frame = +2
Query: 254 LDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 430
+D FL +L +E L I PVQKQT AGQ+TRFKA+V +GD++ HIGLG K +KEV AI+
Sbjct: 98 VDHFL-KTLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQGAIQ 155
Score = 58.8 bits (136), Expect = 2e-07
Identities = 24/38 (63%), Positives = 34/38 (89%)
Frame = +3
Query: 144 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIL 257
++EWVP+TKLGRLV+ GKI LE+I+ FS+PIKE++I+
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQIV 98
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 68.5 bits (160), Expect = 2e-10
Identities = 34/84 (40%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Frame = +2
Query: 233 TNQRIRDLDFF--LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCS 406
T IR+++ L P L+D+VL + +Q+ T +G+R RF +G+++G++GL +
Sbjct: 16 TGLPIREVEIVDALLPGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGLAICKG 75
Query: 407 KEVATAIRGAIILAKLSVLPVRRG 478
KEVA+ IR AI AKL+++PV RG
Sbjct: 76 KEVASTIRKAIDKAKLNMIPVMRG 99
Score = 54.0 bits (124), Expect = 4e-06
Identities = 24/55 (43%), Positives = 36/55 (65%)
Frame = +1
Query: 505 TPVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGSTGT 669
T VP K+TG+ GS V L+PAP G G+V + +++L +AGV D ++ + G T T
Sbjct: 111 TSVPLKITGRSGSTRVTLMPAPAGKGLVVSDYGRRVLTLAGVTDVWSRSAGQTRT 165
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 68.1 bits (159), Expect = 3e-10
Identities = 35/77 (45%), Positives = 54/77 (70%)
Frame = -1
Query: 508 VWLSDLVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALS 329
V L+ + TPVTSS+W N QL D++ S+G+ +FL+ L+TQT++TV V N + LE+ +L+
Sbjct: 105 VRLTQVGTPVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTDVTVGVTNDDDSLESGSLT 164
Query: 328 GTCLFLYRHDL*NLIIQ 278
+ L L R D+ N I+Q
Sbjct: 165 SSGLLLDRLDVHNFILQ 181
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 67.7 bits (158), Expect = 3e-10
Identities = 34/81 (41%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Frame = +2
Query: 272 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 451
P L EV+ I VQKQT AG+ +R+K V +G+ +G++ +G +K++ AI+ AI AK
Sbjct: 52 PKLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKAKQLRVAIQKAIRDAK 111
Query: 452 LSVLPVRR--GYWGNKIGKPH 508
++++PVRR G W G+PH
Sbjct: 112 MNIIPVRRGCGSWQCTCGEPH 132
Score = 62.5 bits (145), Expect = 1e-08
Identities = 29/57 (50%), Positives = 39/57 (68%)
Frame = +1
Query: 511 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGSTGTFGKF 681
+P KV GK GSV V L+PAP+GTG+V V K LL AG++D +++T+G T T F
Sbjct: 134 LPFKVVGKAGSVEVDLLPAPKGTGLVVGSVLKTLLTYAGIKDAWSTTKGETRTTENF 190
Score = 39.5 bits (88), Expect = 0.10
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +3
Query: 147 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIL 257
+EW P T +G LV+EGKI ++ ++ +LPI E EI+
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLPITEPEIV 47
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 67.3 bits (157), Expect = 4e-10
Identities = 35/61 (57%), Positives = 39/61 (63%)
Frame = +1
Query: 499 KATPVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGSTGTFGK 678
++T V KVT GSV V LIPAPRGTGIVSAPV K L AG+ +CY S R T T
Sbjct: 55 RSTLVQYKVTSHYGSVLVHLIPAPRGTGIVSAPVLTKFLMNAGIYNCYISARCYTATLYN 114
Query: 679 F 681
F
Sbjct: 115 F 115
Score = 65.7 bits (153), Expect = 1e-09
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +2
Query: 311 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 454
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQL 48
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 67.3 bits (157), Expect = 4e-10
Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Frame = +2
Query: 263 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 442
+L P L DEV+ I Q+ T +G+R + +G+ NG++G+G +KE A AI+ AI
Sbjct: 41 YLIPDLKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAKEAAPAIKKAID 100
Query: 443 LAKLSVLPVRR--GYWGNKIGKPH 508
AKL+++ ++R G W GKPH
Sbjct: 101 NAKLNIIEIKRGCGSWECGCGKPH 124
Score = 50.0 bits (114), Expect = 7e-05
Identities = 25/57 (43%), Positives = 33/57 (57%)
Frame = +1
Query: 499 KATPVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGSTGT 669
K +P V GK GSV+V L PAP+G G+ V K +L+MAG+ D + G T T
Sbjct: 122 KPHTLPFLVNGKSGSVSVTLKPAPQGVGLAVGDVVKVILRMAGIDDAWGFAAGHTKT 178
Score = 38.7 bits (86), Expect = 0.18
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 147 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIL 257
+EW P T+LGRLV G+I + LP+KE++I+
Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHSKLPLKEYQIV 39
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 66.9 bits (156), Expect = 6e-10
Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Frame = +2
Query: 281 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 460
N EVL I + T +G+R RF+ A+G+ +G++GLG+ KEV AIR AI AKL++
Sbjct: 62 NQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEVGIAIRKAINYAKLNI 121
Query: 461 LPVRR--GYWGNKIGKPH 508
+ ++R G W + +PH
Sbjct: 122 IEIKRGCGSWECRCRRPH 139
Score = 64.1 bits (149), Expect = 4e-09
Identities = 33/62 (53%), Positives = 40/62 (64%)
Frame = +1
Query: 496 RKATPVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGSTGTFG 675
R+ VP V GK GSV VRLIP PRG G+V V KK+L++AGVQD ++ T G T T
Sbjct: 136 RRPHSVPFAVEGKEGSVRVRLIPGPRGLGLVIGDVGKKILRLAGVQDVWSQTFGETRTTV 195
Query: 676 KF 681
F
Sbjct: 196 NF 197
Score = 37.5 bits (83), Expect = 0.41
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +3
Query: 150 EWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIL 257
EW P TKLG +V+EG+I + I+ IKE EI+
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIKEPEII 50
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 65.3 bits (152), Expect = 2e-09
Identities = 29/53 (54%), Positives = 41/53 (77%)
Frame = +1
Query: 511 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGSTGT 669
VP KV GK GSVT+ +IPAPRG G+V+ K+LL++AG++D +T+ +GST T
Sbjct: 167 VPFKVKGKGGSVTIEIIPAPRGLGLVAGGKIKRLLELAGLKDAWTTAKGSTPT 219
Score = 62.1 bits (144), Expect = 2e-08
Identities = 31/69 (44%), Positives = 43/69 (62%)
Frame = +2
Query: 272 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 451
P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G SK++ AI A A
Sbjct: 85 PDLKSEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGIGQGKSKQMRIAIEKATNAAY 144
Query: 452 LSVLPVRRG 478
L+V P++ G
Sbjct: 145 LNVNPIKMG 153
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 64.9 bits (151), Expect = 2e-09
Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Frame = +2
Query: 266 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 445
L P L DEVL I VQ+ T +G+R +F+ VA+G+ +G IG +V AI+ AI +
Sbjct: 44 LVPDLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIGYAEGRDDQVGGAIQKAIDI 103
Query: 446 AKLSVLPVRR--GYWGNKIGKPHPSLARS 526
AKL+++ V R G W G+PH R+
Sbjct: 104 AKLNIIDVSRGCGSWECGCGRPHTVALRT 132
Score = 53.6 bits (123), Expect = 6e-06
Identities = 24/57 (42%), Positives = 35/57 (61%)
Frame = +1
Query: 511 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGSTGTFGKF 681
V + GK GSV V L PAPRG G+ +K+L++AG++D +T + G+T T F
Sbjct: 128 VALRTEGKAGSVEVELQPAPRGLGLAGGETVRKVLELAGIEDIWTRSSGNTRTTVNF 184
Score = 36.3 bits (80), Expect = 0.95
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +3
Query: 153 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIL 257
W P T+LG+ V EG+ID ++ LP+KE E++
Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKESEVV 41
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 63.3 bits (147), Expect = 7e-09
Identities = 27/53 (50%), Positives = 40/53 (75%)
Frame = +1
Query: 511 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGSTGT 669
VP KV GK GSV + ++PAPRG G+V+ ++LL++AG++D YT+ +GST T
Sbjct: 148 VPFKVRGKGGSVVIEILPAPRGLGLVAGGKIRRLLELAGLKDAYTTAKGSTPT 200
Score = 58.4 bits (135), Expect = 2e-07
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = +2
Query: 272 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 451
P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G +K++ AI A A
Sbjct: 66 PDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQAL 125
Query: 452 LSVLPVRRG 478
L+V P++ G
Sbjct: 126 LNVGPIKLG 134
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 62.1 bits (144), Expect = 2e-08
Identities = 32/68 (47%), Positives = 44/68 (64%)
Frame = +2
Query: 257 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 436
DF LG L D+VLK+M VQKQ +AG+R RFK V I D N ++ LGV+ KE+ A+
Sbjct: 156 DFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVTIRDCNDNVSLGVEWPKELLIAVCRT 215
Query: 437 IILAKLSV 460
+L+ + V
Sbjct: 216 NVLSIILV 223
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 60.5 bits (140), Expect = 5e-08
Identities = 29/69 (42%), Positives = 45/69 (65%)
Frame = +2
Query: 272 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 451
P L DEVL I VQ+ T +G+R +F+ VA+G+ +G++G +V AI+ AI +AK
Sbjct: 97 PGLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLGYAQARDDQVGGAIQKAIDVAK 156
Query: 452 LSVLPVRRG 478
L+++ V RG
Sbjct: 157 LNIIEVDRG 165
Score = 55.2 bits (127), Expect = 2e-06
Identities = 23/50 (46%), Positives = 36/50 (72%)
Frame = +1
Query: 520 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGSTGT 669
K GK GSVTV + PAP+G G+ +A + +L++AGV+D +T++ G+T T
Sbjct: 182 KAEGKAGSVTVEIQPAPQGLGLAAAETVRNILELAGVEDAWTNSDGNTRT 231
Score = 35.1 bits (77), Expect = 2.2
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +3
Query: 153 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIL 257
W P T+LGR V+ G I +E LP+KE EI+
Sbjct: 58 WEPRTRLGRKVQNGDISSMEQALDSGLPLKEAEIV 92
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 59.3 bits (137), Expect = 1e-07
Identities = 38/85 (44%), Positives = 46/85 (54%)
Frame = +2
Query: 254 LDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRG 433
++FFLG L DEVL+ M Q QRTR K F + + L V CSKEV TA +
Sbjct: 53 IEFFLGEHLKDEVLRTMLAQ-----NQRTRIKVFFFLTIRSPMTTL-VNCSKEVGTAAQR 106
Query: 434 AIILAKLSVLPVRRGYWGNKIGKPH 508
AI L + + GY GNKIG PH
Sbjct: 107 AITLLSF-LFSTQTGYKGNKIGNPH 130
Score = 40.3 bits (90), Expect = 0.058
Identities = 22/41 (53%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 511 VPCKVTG-KCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGV 630
+PC VT + V V L APRGTG VSA VPKKL +A +
Sbjct: 132 IPCDVTATEKNLVLVCLTTAPRGTGTVSASVPKKLPLLASI 172
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +3
Query: 135 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 242
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 56.8 bits (131), Expect = 6e-07
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +2
Query: 269 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 448
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 449 KLSVL--PVRRGY 481
K + + P+ + Y
Sbjct: 128 KKTAITVPITKDY 140
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 54.4 bits (125), Expect = 3e-06
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Frame = +2
Query: 311 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYW 484
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL+++ V R G W
Sbjct: 72 QKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVARGCGSW 131
Query: 485 GNKIGKPH 508
G PH
Sbjct: 132 ECACGAPH 139
Score = 51.2 bits (117), Expect = 3e-05
Identities = 24/53 (45%), Positives = 35/53 (66%)
Frame = +1
Query: 511 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGSTGT 669
+P +V GK GSV V L PAP+G GIV+ KK+ ++AG++D + + G T T
Sbjct: 141 IPYQVEGKSGSVRVILKPAPKGVGIVADDEIKKIFRLAGIKDVWVRSFGKTKT 193
Score = 40.3 bits (90), Expect = 0.058
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +3
Query: 147 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIL 257
+EW P TKLGRLV+EGKI ++ I I+E EI+
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEILSNKYVIREPEIV 41
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 53.6 bits (123), Expect = 6e-06
Identities = 33/88 (37%), Positives = 46/88 (52%)
Frame = +2
Query: 272 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 451
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 452 LSVLPVRRGYWGNKIGKPHPSLARSPAS 535
+ VR G I PH ++ R AS
Sbjct: 73 KQL--VRIPITGTTI--PHDTIGRFGAS 96
Score = 37.1 bits (82), Expect = 0.54
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 505 TPVPCKVTGKCGSVTVRLIPAPRGTGIVS-APVPKKLLQMAGVQDCYTSTRGS 660
T +P G+ G+ L PA +GTGIV+ + +L++ G+ D T T GS
Sbjct: 83 TTIPHDTIGRFGASKFFLKPASKGTGIVAGGKAARTILELVGINDVLTKTFGS 135
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 52.8 bits (121), Expect = 1e-05
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +2
Query: 278 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 457
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 458 VLPV 469
++ V
Sbjct: 72 LISV 75
Score = 43.6 bits (98), Expect = 0.006
Identities = 20/52 (38%), Positives = 32/52 (61%)
Frame = +1
Query: 505 TPVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGS 660
T +P ++ G+ GS V + PA GTG++S + +L++AGV D T + GS
Sbjct: 80 TTIPHEIHGQFGSGNVLMKPAAEGTGVISGGPVRAILELAGVGDILTKSLGS 131
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 51.6 bits (118), Expect = 2e-05
Identities = 29/63 (46%), Positives = 38/63 (60%)
Frame = +2
Query: 257 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 436
DF L L D+VLK+M V+KQ AG+ RFK V I N ++ LGV+ KE+ A+
Sbjct: 22 DFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLGVERPKELLIAVCRT 81
Query: 437 IIL 445
IIL
Sbjct: 82 IIL 84
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = +2
Query: 275 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 454
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 455 SVLPVRR 475
+++ V++
Sbjct: 108 NLIKVKQ 114
Score = 46.8 bits (106), Expect = 7e-04
Identities = 19/46 (41%), Positives = 31/46 (67%)
Frame = +1
Query: 523 VTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGS 660
V G+ G+ V L+PAP GTGI++ + ++++AG D YT +RG+
Sbjct: 124 VNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFTDIYTKSRGA 169
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 51.2 bits (117), Expect = 3e-05
Identities = 24/71 (33%), Positives = 43/71 (60%)
Frame = +2
Query: 257 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 436
DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 437 IILAKLSVLPV 469
++ AK SV+ V
Sbjct: 566 LVDAKKSVVRV 576
Score = 33.1 bits (72), Expect = 8.8
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +1
Query: 502 ATPVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 636
A +P +V K + ++PA GTG+++ + +L++AGVQ+
Sbjct: 581 AGTIPHRVEAKFNAARCVMVPAADGTGVLAGSSIRSVLELAGVQN 625
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 51.2 bits (117), Expect = 3e-05
Identities = 20/35 (57%), Positives = 28/35 (80%)
Frame = +3
Query: 153 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIL 257
W PVTKLGRLV++GK+ ++ I+ F + IKEFEI+
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIKEFEIV 69
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 50.0 bits (114), Expect = 7e-05
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Frame = +2
Query: 284 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV- 460
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK ++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 461 -LPVRRGYWGNKIGKPHPSLARSPASVVL 544
+PV G PH + R AS VL
Sbjct: 77 EVPVING------TIPHEVIGRQDASKVL 99
Score = 39.5 bits (88), Expect = 0.10
Identities = 18/51 (35%), Positives = 32/51 (62%)
Frame = +1
Query: 511 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGST 663
+P +V G+ + V L PA GTGI++ + ++++AG+Q+ T + GST
Sbjct: 85 IPHEVIGRQDASKVLLKPAAPGTGIIAGGTVRAVVELAGIQNILTKSLGST 135
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +2
Query: 278 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 457
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 458 VLPVR 472
+ V+
Sbjct: 138 MYKVK 142
Score = 39.5 bits (88), Expect = 0.10
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +1
Query: 520 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRG 657
+V GK G+ V + PAP+GTG+++ K +L++ G +D Y+ G
Sbjct: 152 EVIGKHGAGKVLIKPAPKGTGVIAGGPIKVVLELCGFKDVYSKNLG 197
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 49.2 bits (112), Expect = 1e-04
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Frame = +2
Query: 164 HQTRPSCSRRKNRQTREHLLVFFT--NQRIRDLDFFLGPSLNDEVLKIMPVQKQTRAGQR 337
++T + N QT+ F N+R + F ++V+ I V K T+ G+
Sbjct: 3 NKTEVVVAENANNQTQPERKKFDRKPNRRPQGPKQFQKDDFEEKVVTIRRVTKVTKGGRH 62
Query: 338 TRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 469
RF A V +GD G +GLG + EV AI+ A+ AK +++ V
Sbjct: 63 FRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVKEAKKNLIRV 106
Score = 39.9 bits (89), Expect = 0.077
Identities = 17/53 (32%), Positives = 31/53 (58%)
Frame = +1
Query: 499 KATPVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRG 657
+ T VP +V G G+ V + PA GTG+++ + ++++AG+ D Y + G
Sbjct: 109 RGTTVPHEVIGHFGAGQVLIKPAKPGTGVIAGGPARAVIELAGIADVYAKSLG 161
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 48.8 bits (111), Expect = 2e-04
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +2
Query: 284 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 463
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 464 PV 469
+
Sbjct: 71 KI 72
Score = 46.8 bits (106), Expect = 7e-04
Identities = 18/54 (33%), Positives = 33/54 (61%)
Frame = +1
Query: 499 KATPVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGS 660
K +P ++ GK G+ T+ + PA GTG+++ +++L++ GV D T +GS
Sbjct: 75 KNNTIPHEIAGKWGATTLWMAPAYEGTGVIAGSASREILELVGVHDILTKIKGS 128
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 47.6 bits (108), Expect = 4e-04
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +2
Query: 284 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 463
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 464 --PVRRG 478
PV G
Sbjct: 79 TVPVENG 85
Score = 37.5 bits (83), Expect = 0.41
Identities = 15/50 (30%), Positives = 30/50 (60%)
Frame = +1
Query: 511 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGS 660
+P ++ G+ + V L PA GTG+++ VP+ + ++AG+ + + GS
Sbjct: 87 IPHEIVGENSTSRVLLKPAGPGTGVIAGTVPRSIAELAGITNMLSKELGS 136
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 47.2 bits (107), Expect = 5e-04
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = -3
Query: 674 PKXXXXXXXXX*QSCTPAI*RSFLGTGADTIPVPRGAGISRTVTEPHLPVTLQG 513
PK QS P+ FLGT A+ +PVP GAG+ T TEP P+TL G
Sbjct: 14 PKVAVQPLAHVQQSSIPSSSSHFLGTEAEVMPVPMGAGMKSTRTEPQWPITLCG 67
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 47.2 bits (107), Expect = 5e-04
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Frame = +2
Query: 284 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 463
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 464 PVRRGYWGNKIGK-PHPSLARSPASVV 541
V NKI PHP S A+ V
Sbjct: 128 RVPL----NKINSIPHPMSGSSGAANV 150
Score = 38.3 bits (85), Expect = 0.23
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +1
Query: 499 KATPVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGS 660
K +P ++G G+ V L PA GTG+++ + +L++AG+++ + GS
Sbjct: 133 KINSIPHPMSGSSGAANVFLKPASGGTGVIAGGAVRTVLELAGIKNVLAKSLGS 186
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 47.2 bits (107), Expect = 5e-04
Identities = 19/62 (30%), Positives = 40/62 (64%)
Frame = +2
Query: 284 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 463
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 464 PV 469
V
Sbjct: 209 QV 210
Score = 35.5 bits (78), Expect = 1.7
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 499 KATPVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGS 660
K + P + G G+ V L PA GTG+++ + +L+MAGV++ GS
Sbjct: 214 KYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGS 267
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +2
Query: 284 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 436
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKA 78
Score = 33.1 bits (72), Expect = 8.8
Identities = 15/63 (23%), Positives = 33/63 (52%)
Frame = +1
Query: 472 KRLLG*QDRKATPVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTST 651
K L+ K+ +P V G G+ + + P+ G+G+++ + +L++AG+++
Sbjct: 84 KNLIDVPITKSLSIPHAVIGDLGACKIIMRPSIEGSGVIAGGAVRTVLEVAGIKNVIAKQ 143
Query: 652 RGS 660
GS
Sbjct: 144 LGS 146
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 45.6 bits (103), Expect = 0.002
Identities = 19/62 (30%), Positives = 38/62 (61%)
Frame = +2
Query: 284 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 463
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 464 PV 469
V
Sbjct: 246 TV 247
Score = 33.9 bits (74), Expect = 5.1
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +1
Query: 514 PCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 636
P + G G+ V L PA GTG+++ + +L+MAGV++
Sbjct: 256 PHRADGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVEN 296
>UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 45.2 bits (102), Expect = 0.002
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = +1
Query: 574 GTGIVSAPVPKKLLQMAGVQDCYTSTRGSTGTFGKF 681
G+ +V+ VPKK+L+ AG++D +TS+RGST T F
Sbjct: 2 GSSVVATRVPKKVLKFAGIEDVFTSSRGSTKTLSNF 37
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 278 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 391
L +EV+ I VQKQT G+ R KA VAIGD+NGH L
Sbjct: 75 LKEEVMTIDQVQKQTSRGKEPRLKASVAIGDHNGHRAL 112
Score = 44.4 bits (100), Expect = 0.004
Identities = 17/33 (51%), Positives = 27/33 (81%)
Frame = +3
Query: 159 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIL 257
PVTKLGRLV++GK+ ++ I+ F + IKE++I+
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIKEYQIV 68
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 269 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 448
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 449 KLSVL--PVRRG 478
K +++ P+R G
Sbjct: 116 KKTMIRVPLREG 127
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 45.2 bits (102), Expect = 0.002
Identities = 26/69 (37%), Positives = 35/69 (50%)
Frame = +2
Query: 269 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 448
G L D V+ I V K + G+ F A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 449 KLSVLPVRR 475
K + V R
Sbjct: 102 KKHMFSVPR 110
Score = 33.5 bits (73), Expect = 6.7
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +1
Query: 523 VTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGS 660
V G + TV L PA GTG+++ + +++ AG+ D T + GS
Sbjct: 119 VQGHDAAGTVLLRPAAPGTGVIAGGSVRAVMECAGITDVLTKSMGS 164
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 44.4 bits (100), Expect = 0.004
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +2
Query: 284 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 457
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 458 VLPVRRG 478
+P+R G
Sbjct: 84 FVPLRGG 90
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 44.4 bits (100), Expect = 0.004
Identities = 28/88 (31%), Positives = 48/88 (54%)
Frame = +2
Query: 281 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 460
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 461 LPVRRGYWGNKIGKPHPSLARSPASVVL 544
V+ + G+ I PH + + ++ V+
Sbjct: 91 --VKINFKGHTI--PHEVIGKFKSARVI 114
Score = 41.9 bits (94), Expect = 0.019
Identities = 23/66 (34%), Positives = 38/66 (57%)
Frame = +1
Query: 466 SSKRLLG*QDRKATPVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYT 645
S+K+ L + K +P +V GK S V L P+ GTGI++ + +++ AG+QD T
Sbjct: 85 SAKKHLVKINFKGHTIPHEVIGKFKSARVILKPSTAGTGIIAGASVRSIVEKAGIQDVLT 144
Query: 646 STRGST 663
+ GS+
Sbjct: 145 KSWGSS 150
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 44.0 bits (99), Expect = 0.005
Identities = 31/87 (35%), Positives = 42/87 (48%)
Frame = +2
Query: 284 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 463
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 464 PVRRGYWGNKIGKPHPSLARSPASVVL 544
R G I HP + A VVL
Sbjct: 104 --RVPLIGGTI--THPVQGEAAAGVVL 126
Score = 33.9 bits (74), Expect = 5.1
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +1
Query: 523 VTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGS 660
V G+ + V L PA GTG+++ + +L+ AGV D + GS
Sbjct: 116 VQGEAAAGVVLLRPASPGTGVIAGGAARAVLECAGVHDILAKSLGS 161
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 43.2 bits (97), Expect = 0.008
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +2
Query: 278 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 457
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 458 VLPV 469
V+ V
Sbjct: 88 VIRV 91
Score = 42.3 bits (95), Expect = 0.014
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +1
Query: 511 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGST 663
VP V G G+ + ++PA RGTG+V+ K + ++AG D T GST
Sbjct: 98 VPHDVIGTFGATKIIVLPARRGTGVVAGGAAKPVFELAGYTDVLTKIIGST 148
>UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
pneumoniae
Length = 219
Score = 42.7 bits (96), Expect = 0.011
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +1
Query: 520 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRG 657
+V G+ G+ V L PAP+GTGI++ + ++++AG D YT G
Sbjct: 139 EVIGRSGASRVLLKPAPQGTGIIAGGAIRAIIELAGYSDIYTKNLG 184
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 41.1 bits (92), Expect = 0.033
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +2
Query: 284 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 463
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 464 PV 469
V
Sbjct: 79 EV 80
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 41.1 bits (92), Expect = 0.033
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 2/136 (1%)
Frame = +2
Query: 143 PERVGSCHQTRPSCSRRKNRQTREHLLVFFTNQRIRDLDFFLGPS--LNDEVLKIMPVQK 316
P+ G+ + T S KN + ++ TN + + P ++++ I V
Sbjct: 42 PDHKGTINTTPNDNSTSKNSKDKDFKFKKKTNSQNFKKNANKKPEKEFEEKIVNIARVTN 101
Query: 317 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKI 496
+ G+R F A V +GD G +G G + EV AI+ A+ A+ +++ V NK
Sbjct: 102 VVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLIRVP---IINKS 158
Query: 497 GKPHPSLARSPASVVL 544
PH A+ AS V+
Sbjct: 159 TVPHEQWAKFLASKVM 174
Score = 36.7 bits (81), Expect = 0.72
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +1
Query: 511 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGS 660
VP + K + V L PAP+G GI+++ + ++++AG D YT + GS
Sbjct: 160 VPHEQWAKFLASKVMLKPAPKGKGIIASNSVRAVVELAGYTDIYTKSYGS 209
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 41.1 bits (92), Expect = 0.033
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +2
Query: 278 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 451
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERAR 73
Score = 35.1 bits (77), Expect = 2.2
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +1
Query: 511 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGS 660
+P +V G G+ V L PA GTG+++ + +L+ AGV + T GS
Sbjct: 86 IPHQVIGHYGAGRVFLRPASAGTGLIAGGPVRAVLEAAGVSNILTKCLGS 135
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 40.3 bits (90), Expect = 0.058
Identities = 21/36 (58%), Positives = 24/36 (66%)
Frame = -1
Query: 253 ISNSLIGKENK*MLSSLSIFPSRTRRPSLVTGTHSF 146
I NSL GKE K + S + I P+ T PSLVTGTH F
Sbjct: 16 IWNSLTGKECKKISSMVVILPALTNLPSLVTGTHPF 51
>UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3;
Bacteria|Rep: 30S ribosomal protein S5 - Rhodopirellula
baltica
Length = 177
Score = 39.1 bits (87), Expect = 0.13
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +1
Query: 511 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGS 660
+P +V G+ G+ V LIPA GTGI++ + + + G+ D T + G+
Sbjct: 91 IPHQVWGRYGAARVVLIPAGAGTGIIAGQAVRAVCEACGIHDILTKSYGT 140
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 37.5 bits (83), Expect = 0.41
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +2
Query: 308 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 475
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR 405
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 37.5 bits (83), Expect = 0.41
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 278 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 430
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIK 121
Score = 34.7 bits (76), Expect = 2.9
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 499 KATPVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGS 660
K +P +V G V L PA GTG+++ + +L+ AGV++ T + GS
Sbjct: 137 KGDTIPHEVFGTHDGGKVLLRPAVTGTGLIAGGAVRAVLEAAGVKNVLTKSMGS 190
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 37.5 bits (83), Expect = 0.41
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +1
Query: 511 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGST 663
+P +V K G V L PA GTG+++ + +L++AGV+D + G++
Sbjct: 85 LPHEVEVKFGGARVLLRPASAGTGLIAGGAVRAILELAGVEDVLAKSLGAS 135
Score = 35.9 bits (79), Expect = 1.3
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 281 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 430
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIR 65
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 37.5 bits (83), Expect = 0.41
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +2
Query: 278 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 457
L ++L V QTR G+ + +G+ NG IGLG S + A+ A ++A +
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 458 VLPVRR 475
++P+RR
Sbjct: 310 MVPIRR 315
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.54
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -1
Query: 439 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 341
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_Q1IL98 Cluster: Amino acid transporter; n=1; Acidobacteria
bacterium Ellin345|Rep: Amino acid transporter -
Acidobacteria bacterium (strain Ellin345)
Length = 485
Score = 37.1 bits (82), Expect = 0.54
Identities = 35/129 (27%), Positives = 53/129 (41%), Gaps = 2/129 (1%)
Frame = +2
Query: 278 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 457
LN V +P Q + + V+IG I + + +AT + A++
Sbjct: 269 LNAAVQYALPAQAIAMSKRAASDAVLVSIGAGAASIFAALMAIQMLATINGTTLSGARIP 328
Query: 458 VLPVRRGYWGNKIGKPHPSLARSPASVVL*QSG*FLPLVVLELCLRQF--LRSFFRWLVY 631
R GY+ IGK HP +PA+ ++ Q + LV L +Q L F WL Y
Sbjct: 329 YALARDGYFFEAIGKVHPRYL-TPANAIVFQGALAVILVSLVGKFQQLFSLTIFAEWLFY 387
Query: 632 RTATPQLVV 658
AT + V
Sbjct: 388 MIATSTVFV 396
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 37.1 bits (82), Expect = 0.54
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 278 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 430
L ++VL + K + G++ F A + +GD G +G G + E+ AIR
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIR 63
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 36.7 bits (81), Expect = 0.72
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +2
Query: 278 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 457
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 458 VLPV 469
++ V
Sbjct: 81 MVRV 84
Score = 33.1 bits (72), Expect = 8.8
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 523 VTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGSTGTF 672
V G+ G+ V + PA GTGI++ + + ++ GV + GST +
Sbjct: 95 VIGRHGAARVYMQPASEGTGIIAGGPMRAIFEVMGVHNILAKCLGSTNPY 144
>UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S5 - Neorickettsia sennetsu (strain Miyayama)
Length = 172
Score = 36.7 bits (81), Expect = 0.72
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 532 KCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGST 663
K G+ + + PAP GTGIV+ +K +M GV D + GS+
Sbjct: 89 KLGASKLFIKPAPEGTGIVAGGAMRKFCEMLGVSDIIAKSYGSS 132
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 35.9 bits (79), Expect = 1.3
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +2
Query: 290 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 469
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 35.5 bits (78), Expect = 1.7
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +2
Query: 308 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 475
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR 378
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 35.1 bits (77), Expect = 2.2
Identities = 22/83 (26%), Positives = 44/83 (53%)
Frame = +2
Query: 215 HLLVFFTNQRIRDLDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLG 394
++ + N ++ + L ++ +++++I + + G+ R+K + +G+ G IGLG
Sbjct: 77 YIYKYNNNIKLNNSIIKLNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLG 136
Query: 395 VKCSKEVATAIRGAIILAKLSVL 463
V SK + I AII AK+ L
Sbjct: 137 V--SKNI--NINKAIISAKIKAL 155
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 35.1 bits (77), Expect = 2.2
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +2
Query: 275 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 454
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A +LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 455 SVLPVRR 475
++ P+RR
Sbjct: 302 NMRPIRR 308
>UniRef50_Q4S4D0 Cluster: Chromosome 2 SCAF14738, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 2
SCAF14738, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 750
Score = 34.7 bits (76), Expect = 2.9
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 499 KATPVPCKVTGKCGSVTVRLIPAPRG-TGIVSAPVPKK 609
+A P P + G + R IPAPRG TG + P PKK
Sbjct: 695 RAPPPPARAPGTADASKARPIPAPRGTTGTLKKPPPKK 732
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.7 bits (76), Expect = 2.9
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 263 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 427
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila
pseudoobscura|Rep: GA16916-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 391
Score = 34.3 bits (75), Expect = 3.8
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Frame = -2
Query: 162 QEPTLSGLPCRAHDHGRDHDRVHE-DRRGLYLHRV-----IRNRRENRHVHRLEQRPPL 4
+EPT S CR+ GR H R G HR+ IR+ R HRL + PP+
Sbjct: 146 REPTRSPSRCRSRQSGRSHQHPQRRSRSGTRQHRLSREPPIRHSRSISRQHRLSREPPV 204
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 34.3 bits (75), Expect = 3.8
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +2
Query: 275 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 454
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 455 SVLPVRR 475
++ PV R
Sbjct: 314 NMQPVPR 320
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 33.9 bits (74), Expect = 5.1
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +2
Query: 263 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 442
F G SL D+++ + + + QRT+ GH GL CS EVATAI+ I
Sbjct: 71 FPGESLKDDLMMASGLGSRLLSSQRTK-----------GHSGLSSMCSGEVATAIQVLGI 119
Query: 443 LAKL-SVLPVRRGYWGNKIGKPHPSL 517
+ L S P+ R GN GK PS+
Sbjct: 120 TSYLGSPWPLCRE--GNMTGKSLPSV 143
>UniRef50_A3VAK2 Cluster: Putative FAD-linked oxidoreductase; n=1;
Rhodobacterales bacterium HTCC2654|Rep: Putative
FAD-linked oxidoreductase - Rhodobacterales bacterium
HTCC2654
Length = 360
Score = 33.5 bits (73), Expect = 6.7
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -3
Query: 614 RSFLGTGADTIPVP-RGAGISRTVTEPHLPVTLQGTGVAFRS 492
R F G P+P R AG+SR +PHL G GV R+
Sbjct: 68 RLFAGRAKAEAPLPFRAAGLSRATLDPHLRTLAAGVGVDLRT 109
>UniRef50_Q86AL0 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Homeobox-containing protein; n=2; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Homeobox-containing protein -
Dictyostelium discoideum (Slime mold)
Length = 766
Score = 33.5 bits (73), Expect = 6.7
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Frame = -1
Query: 577 YHEGQESAGLLQNHTCR*PCKGRVWLSDLVTPVTSSNW*NRQLSKDNSASNGSGDFLAAL 398
++E + ++ NH CR + D TP T N+++ SA+ +FL
Sbjct: 635 FNENKTMKKVVFNHWCRFRGGILKFPKDKQTPNTY----NKEIGSLFSANGSIKNFLMWS 690
Query: 397 HTQTNMTV-VVANGNK---CLETCALSGTCLF-LYRHDL*NLIIQGRAEEEIK-ISNSLI 236
T T + ++++GNK C ET A+ TC F Y DL LI Q + E I N+ I
Sbjct: 691 STTTQVIEEILSSGNKTITCFETSAIDNTCNFDKYLLDLNRLINQYQHIERFDFIKNTYI 750
Query: 235 GKEN 224
+N
Sbjct: 751 YAKN 754
>UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n=5;
Bacteria|Rep: Ribosomal protein S2-related protein -
Deinococcus radiodurans
Length = 472
Score = 33.1 bits (72), Expect = 8.8
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 347 KAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 499
++ V IG + H G + +++VA A+RG + L V GYW + G
Sbjct: 2 RSLVLIGHGSHHHGESARATQQVAEALRGRGLAGHLPYDEVLEGYWQQEPG 52
>UniRef50_Q38AQ9 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 470
Score = 33.1 bits (72), Expect = 8.8
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 612 SSDGWCTGLLHLNSWFNW 665
S DGWC G+ H N+ FNW
Sbjct: 419 SRDGWCAGVRHSNTPFNW 436
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 8.8
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 290 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 436
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 849,051,736
Number of Sequences: 1657284
Number of extensions: 18863627
Number of successful extensions: 52474
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 49292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52295
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72553824147
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -