Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40194
         (831 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D83784-1|BAA12113.1|  562|Homo sapiens KIAA0198 protein.               32   2.9  
BC023655-1|AAH23655.1|  496|Homo sapiens pleiomorphic adenoma ge...    32   2.9  
AL121897-2|CAC16423.1|  496|Homo sapiens pleiomorphic adenoma ge...    32   2.9  
AF006005-1|AAC34252.1|  496|Homo sapiens zinc finger protein PLA...    32   2.9  
AB033062-1|BAA86550.2| 1840|Homo sapiens KIAA1236 protein protein.     31   6.8  

>D83784-1|BAA12113.1|  562|Homo sapiens KIAA0198 protein.
          Length = 562

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -3

Query: 829 HNLRASKEMNAKIPFPGSLTLTAPESG-LNCRFCKQYIETAEATILHL 689
           H     K  N K+ +   L + A  SG L+C+ C Q  E+ +A + HL
Sbjct: 194 HCSECGKNYNTKLGYRRHLAMHAASSGDLSCKVCLQTFESTQALLEHL 241


>BC023655-1|AAH23655.1|  496|Homo sapiens pleiomorphic adenoma
           gene-like 2 protein.
          Length = 496

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -3

Query: 829 HNLRASKEMNAKIPFPGSLTLTAPESG-LNCRFCKQYIETAEATILHL 689
           H     K  N K+ +   L + A  SG L+C+ C Q  E+ +A + HL
Sbjct: 128 HCSECGKNYNTKLGYRRHLAMHAASSGDLSCKVCLQTFESTQALLEHL 175


>AL121897-2|CAC16423.1|  496|Homo sapiens pleiomorphic adenoma
           gene-like 2 protein.
          Length = 496

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -3

Query: 829 HNLRASKEMNAKIPFPGSLTLTAPESG-LNCRFCKQYIETAEATILHL 689
           H     K  N K+ +   L + A  SG L+C+ C Q  E+ +A + HL
Sbjct: 128 HCSECGKNYNTKLGYRRHLAMHAASSGDLSCKVCLQTFESTQALLEHL 175


>AF006005-1|AAC34252.1|  496|Homo sapiens zinc finger protein PLAGL2
           protein.
          Length = 496

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -3

Query: 829 HNLRASKEMNAKIPFPGSLTLTAPESG-LNCRFCKQYIETAEATILHL 689
           H     K  N K+ +   L + A  SG L+C+ C Q  E+ +A + HL
Sbjct: 128 HCSECGKNYNTKLGYRRHLAMHAASSGDLSCKVCLQTFESTQALLEHL 175


>AB033062-1|BAA86550.2| 1840|Homo sapiens KIAA1236 protein protein.
          Length = 1840

 Score = 30.7 bits (66), Expect = 6.8
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -3

Query: 796 KIPFPGSLTLTAPESGLNCRFCKQYIETAEATILHLL 686
           K+P PG+L    PE+   C  C  +++      +HLL
Sbjct: 65  KLPAPGALPACRPEAERRCDVCATHLQQLTREAMHLL 101


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,056,100
Number of Sequences: 237096
Number of extensions: 2613867
Number of successful extensions: 7366
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7362
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10426655866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)