Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40191
         (851 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    26   0.43 
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    26   0.43 
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    25   1.0  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           25   1.0  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    24   1.8  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    24   1.8  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   3.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.4  

>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 25.8 bits (54), Expect = 0.43
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 197 LPLVELREIDSGLGQSAPQPHRKQCF-KALTNFCLTALKKGNFEKD 331
           LPL++   +    G    +PHR+  F K + +F  T  K   F+ D
Sbjct: 248 LPLMDFSVLVEACGVLQQEPHRRDAFLKEVADFQETLKKISQFQLD 293


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 25.8 bits (54), Expect = 0.43
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 197 LPLVELREIDSGLGQSAPQPHRKQCF-KALTNFCLTALKKGNFEKD 331
           LPL++   +    G    +PHR+  F K + +F  T  K   F+ D
Sbjct: 248 LPLMDFSVLVEACGVLQQEPHRRDAFLKEVADFQETLKKISQFQLD 293


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 795 GNGENLINMGFTNHLTSTIG 736
           G GEN+++M  T H  S++G
Sbjct: 341 GLGENMMDMSLTRHQISSMG 360


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 795 GNGENLINMGFTNHLTSTIG 736
           G GEN+++M  T H  S++G
Sbjct: 341 GLGENMMDMSLTRHQISSMG 360


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 123 FKKCVIDQGKVLVESQHWESVLHYVFL 203
           FKKC+    KVL +++  +S +H + L
Sbjct: 138 FKKCIDPVDKVLQDAKIGKSAVHEIVL 164


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 123 FKKCVIDQGKVLVESQHWESVLHYVFL 203
           FKKC+    KVL +++  +S +H + L
Sbjct: 138 FKKCIDPVDKVLQDAKIGKSAVHEIVL 164


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +2

Query: 200 PLVELREIDSGLGQSAPQPHRKQCFKALTNFCL 298
           PL+ L +I   L   + Q  +K C     N+C+
Sbjct: 17  PLINLTKIFGFLPVCSSQKGQKTCLNLSINYCI 49


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 212  LREIDSGLGQSAPQPHRKQCFK 277
            LR ++ GLG     P R+ C K
Sbjct: 984  LRSLNRGLGLIPDNPSREDCTK 1005


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 115 WQHLRNASLIREKFLWNPSIGNP 183
           W+HL   +    + L NPS+ +P
Sbjct: 83  WKHLDFRNSATAELLKNPSLSSP 105


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 115 WQHLRNASLIREKFLWNPSIGNP 183
           W+HL   +    + L NPS+ +P
Sbjct: 83  WKHLDFRNSATAELLKNPSLSSP 105


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,448
Number of Sequences: 336
Number of extensions: 4285
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)