Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40190
(837 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 175 5e-44
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 155 6e-38
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 138 5e-33
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 130 2e-30
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 122 3e-28
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 122 4e-28
SB_7588| Best HMM Match : DcpS (HMM E-Value=0) 109 4e-24
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 107 8e-24
SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44) 98 9e-21
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 92 6e-19
SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13) 80 3e-15
SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 3e-15
SB_214| Best HMM Match : Arf (HMM E-Value=0) 74 1e-13
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 73 2e-13
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 3e-11
SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05) 53 3e-07
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 42 5e-04
SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 8e-04
SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 8e-04
SB_16166| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 40 0.003
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 39 0.004
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.006
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.013
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 37 0.018
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 37 0.023
SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.041
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 36 0.041
SB_8302| Best HMM Match : G-alpha (HMM E-Value=0) 36 0.041
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 35 0.071
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 35 0.071
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 35 0.094
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 34 0.12
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 34 0.12
SB_14105| Best HMM Match : G-alpha (HMM E-Value=0) 34 0.16
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 33 0.29
SB_23535| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.38
SB_19345| Best HMM Match : Arf (HMM E-Value=3.3e-05) 33 0.38
SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048) 33 0.38
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.50
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 32 0.66
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 32 0.66
SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 31 1.2
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 31 1.2
SB_15121| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_38597| Best HMM Match : Arf (HMM E-Value=0.15) 30 2.7
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_37006| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-22) 29 3.5
SB_57168| Best HMM Match : DUF845 (HMM E-Value=4.1) 29 6.2
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 29 6.2
SB_51602| Best HMM Match : Glyco_hydro_38C (HMM E-Value=1.1e-31) 29 6.2
SB_1913| Best HMM Match : Arf (HMM E-Value=0.015) 28 8.2
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 175 bits (425), Expect = 5e-44
Identities = 80/87 (91%), Positives = 85/87 (97%)
Frame = +2
Query: 248 QKLSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 427
+ +SFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRER+GEAREEL RML+EDELRD
Sbjct: 59 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELNRMLNEDELRD 118
Query: 428 AVLLIFANKQDLPNAMNAAEITDKLGL 508
AVLL+FANKQDLPNAMNAAEITDKLGL
Sbjct: 119 AVLLVFANKQDLPNAMNAAEITDKLGL 145
Score = 119 bits (287), Expect = 3e-27
Identities = 57/61 (93%), Positives = 58/61 (95%)
Frame = +3
Query: 75 MGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 254
MG MFA LF GLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1 MGGMFAKLFAGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 255 L 257
+
Sbjct: 61 I 61
Score = 72.1 bits (169), Expect = 5e-13
Identities = 31/36 (86%), Positives = 32/36 (88%)
Frame = +1
Query: 502 GSDSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKN 609
G SLRNR WYIQATCATSGDGLYEGLDWLSN LK+
Sbjct: 144 GLHSLRNRQWYIQATCATSGDGLYEGLDWLSNTLKS 179
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 155 bits (375), Expect = 6e-38
Identities = 67/87 (77%), Positives = 81/87 (93%)
Frame = +2
Query: 248 QKLSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 427
+ +SFTVWDVGGQDKIRPLWRHYFQNTQGLI+VVDSNDRER+ E++EEL +ML EDEL+D
Sbjct: 59 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRERVNESKEELNKMLQEDELKD 118
Query: 428 AVLLIFANKQDLPNAMNAAEITDKLGL 508
AV+L+ ANKQDLPNA++ +EIT+KLGL
Sbjct: 119 AVVLVMANKQDLPNALSVSEITEKLGL 145
Score = 106 bits (255), Expect = 2e-23
Identities = 51/61 (83%), Positives = 56/61 (91%)
Frame = +3
Query: 75 MGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 254
MG ++LF LFGKK+MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVE+VEYKN
Sbjct: 1 MGLTISSLFTRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVESVEYKN 60
Query: 255 L 257
+
Sbjct: 61 I 61
Score = 62.5 bits (145), Expect = 4e-10
Identities = 26/41 (63%), Positives = 30/41 (73%)
Frame = +1
Query: 481 SRDNRQTGSDSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 603
S + G S+R+R WYIQA CAT G GLYEGLDWLSN+L
Sbjct: 137 SEITEKLGLQSIRDRQWYIQAACATQGTGLYEGLDWLSNEL 177
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 138 bits (334), Expect = 5e-33
Identities = 62/70 (88%), Positives = 67/70 (95%)
Frame = +2
Query: 248 QKLSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 427
+ +SFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRER GEA+EEL RML+EDELRD
Sbjct: 508 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERAGEAKEELSRMLAEDELRD 567
Query: 428 AVLLIFANKQ 457
AVLL+FANKQ
Sbjct: 568 AVLLVFANKQ 577
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 90 ANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVEYKNL 257
AN + G+ E R + D + ++ + I + P GFNVETVEYKN+
Sbjct: 454 ANSYTETEGQTEQRFFALAQDGSRRSRYKGSRQKTHIQAMVSPVQGFNVETVEYKNI 510
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 130 bits (313), Expect = 2e-30
Identities = 57/87 (65%), Positives = 73/87 (83%)
Frame = +2
Query: 248 QKLSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 427
+ + FTVWD+GGQDKIR LWR YFQ TQGLIFVVDSNDR+RI EA+EEL ++L E+EL+
Sbjct: 132 KNIKFTVWDIGGQDKIRLLWRLYFQETQGLIFVVDSNDRDRIQEAKEELFKLLKEEELKR 191
Query: 428 AVLLIFANKQDLPNAMNAAEITDKLGL 508
A LL+ ANKQDLP++M+ E+++KL L
Sbjct: 192 AALLVLANKQDLPDSMSTTELSEKLSL 218
Score = 96.3 bits (229), Expect = 3e-20
Identities = 46/62 (74%), Positives = 51/62 (82%)
Frame = +3
Query: 72 KMGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK 251
KMGN +LF+ L GK E+R+LMVGLDAAGKTTILY LKL E V TIPTIGFNVE VEYK
Sbjct: 73 KMGNSVLSLFRRLLGKDELRLLMVGLDAAGKTTILYHLKLDEPVNTIPTIGFNVEVVEYK 132
Query: 252 NL 257
N+
Sbjct: 133 NI 134
Score = 56.8 bits (131), Expect = 2e-08
Identities = 21/32 (65%), Positives = 28/32 (87%)
Frame = +1
Query: 511 SLRNRNWYIQATCATSGDGLYEGLDWLSNQLK 606
+LR+RNWYIQATCA G G+YEGL+WL+ Q++
Sbjct: 220 TLRSRNWYIQATCALKGQGVYEGLEWLAQQIQ 251
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 122 bits (295), Expect = 3e-28
Identities = 55/87 (63%), Positives = 70/87 (80%)
Frame = +2
Query: 248 QKLSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 427
+ +SFTVWD+GGQDKIR LWR Y+Q QG+IFVVDS DRER EAR EL ++L+E+EL+
Sbjct: 38 KNISFTVWDIGGQDKIRALWRVYYQGCQGIIFVVDSADRERAEEARNELHKLLAEEELQQ 97
Query: 428 AVLLIFANKQDLPNAMNAAEITDKLGL 508
+LL+ ANKQD+ NAM A+EI +KL L
Sbjct: 98 VILLVIANKQDMANAMTASEIREKLKL 124
Score = 70.5 bits (165), Expect = 2e-12
Identities = 30/40 (75%), Positives = 37/40 (92%)
Frame = +3
Query: 138 MVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNL 257
M+GLD AGKTTILY+LKL E+V+T+PT+GFNVETV YKN+
Sbjct: 1 MIGLDNAGKTTILYRLKLEEVVSTVPTLGFNVETVTYKNI 40
Score = 51.6 bits (118), Expect = 8e-07
Identities = 16/34 (47%), Positives = 27/34 (79%)
Frame = +1
Query: 508 DSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKN 609
+ +R R W++Q+ CA G+GL+EGLDW++ Q++N
Sbjct: 125 NEIRGRPWFVQSACAVKGEGLFEGLDWMATQIRN 158
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 122 bits (294), Expect = 4e-28
Identities = 53/89 (59%), Positives = 70/89 (78%)
Frame = +2
Query: 248 QKLSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 427
+ ++ T+WDVGGQDKIRPLWRHYFQ T+GL+FVVDS+D R+ EA+EEL +L DE RD
Sbjct: 62 KNVTLTIWDVGGQDKIRPLWRHYFQGTEGLLFVVDSSDVLRMPEAKEELHGVLDSDEFRD 121
Query: 428 AVLLIFANKQDLPNAMNAAEITDKLGLIR 514
+++ ANKQDLPNA+ A E+ LGL++
Sbjct: 122 VPVVVVANKQDLPNALKAGEMAKHLGLLQ 150
Score = 77.0 bits (181), Expect = 2e-14
Identities = 37/52 (71%), Positives = 46/52 (88%), Gaps = 1/52 (1%)
Frame = +3
Query: 111 FGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE-YKNLVL 263
FG +++RI+M+GLDAAGKTTILYKLKL E V+TIPTIGFNVET++ KN+ L
Sbjct: 15 FGNRQVRIVMLGLDAAGKTTILYKLKLKETVSTIPTIGFNVETLQPTKNVTL 66
Score = 39.1 bits (87), Expect = 0.004
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = +1
Query: 529 WYIQATCATSGDGLYEGLDWLSNQLKNANR 618
W++Q CAT+GDGLYE +D + +K+ ++
Sbjct: 156 WHVQEACATNGDGLYEAMDHMVRMVKDFHK 185
>SB_7588| Best HMM Match : DcpS (HMM E-Value=0)
Length = 446
Score = 109 bits (261), Expect = 4e-24
Identities = 60/124 (48%), Positives = 80/124 (64%), Gaps = 7/124 (5%)
Frame = +2
Query: 272 DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFAN 451
DVGGQDKIRPLWRHYF +QGLIFVVD DR+RI EAR+EL R++++ E++D ++LIFAN
Sbjct: 143 DVGGQDKIRPLWRHYFAGSQGLIFVVDCADRDRIDEARKELQRIINDREMKDVIILIFAN 202
Query: 452 KQDLPNAMNAAEITDKLGLIRCATVTGTSKRHAPLPETDCTRVST-------GSPISSRT 610
KQDLP+ + D + L+ T S R+ P+ + T++S G I
Sbjct: 203 KQDLPDGKFQSCDDDAVVLLE---KTPFSARNLPIVLSKDTKLSVDMRNDVYGQYIGYPA 259
Query: 611 PTAN 622
PTAN
Sbjct: 260 PTAN 263
Score = 41.5 bits (93), Expect = 8e-04
Identities = 23/56 (41%), Positives = 30/56 (53%)
Frame = -3
Query: 412 FAEHPHELFACLADTFPIVTVYYED*TLCILEIMPPQWSDFVLASNIPHSKTKFLY 245
F L + L +T PI T+Y ED L +M PQ +DFVL+SNI K K +
Sbjct: 70 FQARTQGLCSGLINTVPICTIYNEDEALGTGVVMAPQRTDFVLSSNILRDKKKLYF 125
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 107 bits (258), Expect = 8e-24
Identities = 48/92 (52%), Positives = 66/92 (71%)
Frame = +2
Query: 239 SRIQKLSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDE 418
S + ++F+VWD+GGQDKIR LWRHYFQ +G+IFVVDS D+ERI E REEL R+L E
Sbjct: 149 SPCKNITFSVWDIGGQDKIRRLWRHYFQGAEGIIFVVDSADKERIFEVREELTRVLQHSE 208
Query: 419 LRDAVLLIFANKQDLPNAMNAAEITDKLGLIR 514
L +++ ANKQDL A+ ++ ++L L +
Sbjct: 209 LNGVPVVVVANKQDLLGAIGPDKMAEELSLYK 240
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +3
Query: 162 KTTILYKLKLGEIVTTIPTIGFNVETV 242
KTTILYKLKL E V T+PT+ FNVET+
Sbjct: 122 KTTILYKLKLKETVNTVPTVAFNVETI 148
Score = 37.1 bits (82), Expect = 0.018
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +1
Query: 529 WYIQATCATSGDGLYEGLDWLS 594
W IQ TCAT+GDGLYE ++ L+
Sbjct: 246 WRIQGTCATAGDGLYEAMEALA 267
>SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44)
Length = 257
Score = 97.9 bits (233), Expect = 9e-21
Identities = 41/78 (52%), Positives = 62/78 (79%)
Frame = +2
Query: 275 VGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANK 454
+ GQ IRP WR Y+ NT +I+VVDS D++RIG +++EL+ ML EDEL+ A+L++FANK
Sbjct: 153 IPGQTSIRPYWRCYYANTDAVIYVVDSVDKDRIGISKQELLAMLEEDELKKAILIVFANK 212
Query: 455 QDLPNAMNAAEITDKLGL 508
QD+ AM+++E+++ LGL
Sbjct: 213 QDMEGAMSSSEVSNALGL 230
Score = 31.9 bits (69), Expect = 0.66
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 502 GSDSLRNRNWYIQATCATSGDGLYEGLDW 588
G +L++R W I T A G+GL E ++W
Sbjct: 229 GLSALKSRTWAIFKTSAVKGEGLDEAMEW 257
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 91.9 bits (218), Expect = 6e-19
Identities = 41/85 (48%), Positives = 58/85 (68%)
Frame = +2
Query: 254 LSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAV 433
+ F VWD+GG+++ RPLW+ Y + T +I+VVDS ++ EAR+EL +L+ +L A
Sbjct: 66 IRFKVWDIGGREQNRPLWKAYARQTDAVIYVVDSTSAGKLEEARDELFNLLNSAQLNGAP 125
Query: 434 LLIFANKQDLPNAMNAAEITDKLGL 508
+LIFANKQD PNA+ EIT L L
Sbjct: 126 ILIFANKQDCPNAIPPREITHMLSL 150
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/60 (48%), Positives = 39/60 (65%), Gaps = 4/60 (6%)
Frame = +3
Query: 75 MGNMFANLFKG----LFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETV 242
MGNMF F+ L K+ ++M+GLD +GKT+ILY+ K E V T+PT FNVET+
Sbjct: 1 MGNMFVVSFRRFRPMLKLKRPFHVVMLGLDKSGKTSILYRNKFREYVNTVPTTAFNVETI 60
>SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13)
Length = 334
Score = 79.8 bits (188), Expect = 3e-15
Identities = 39/90 (43%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Frame = +2
Query: 248 QKLSFTVWDVGGQDKIRPLWRHYFQNTQ-GLIFVVDSNDRERIGEAREELMRMLSEDELR 424
+ + F VWD+GGQ +R +HYF + + GLI+VVDS D +R+ EA +L+ +L E +
Sbjct: 16 KNVHFAVWDIGGQPNLR---KHYFTDDKSGLIYVVDSTDIQRLNEA--QLLGILQEKVMV 70
Query: 425 DAVLLIFANKQDLPNAMNAAEITDKLGLIR 514
D +++ ANKQDLPN + A +I + LGL++
Sbjct: 71 DVPVVVVANKQDLPNVLKAGDIAEHLGLLK 100
>SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 79.4 bits (187), Expect = 3e-15
Identities = 34/85 (40%), Positives = 54/85 (63%)
Frame = +2
Query: 254 LSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAV 433
L+ +W++GG +K R W ++ +TQ L++VVDS+D +R E+R+ L +LS L
Sbjct: 213 LNLNIWEIGGDEKYRAYWPNFIADTQLLVYVVDSSDPDRFNESRDNLKSLLSNSLLNGVP 272
Query: 434 LLIFANKQDLPNAMNAAEITDKLGL 508
+L+ A+KQDLP A +EI LG+
Sbjct: 273 VLLVASKQDLPGARQLSEIVSVLGI 297
Score = 31.5 bits (68), Expect = 0.88
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +3
Query: 123 EMRILMVGLDAAGKTTILYKLKLGEI---VTTIPTIGFNV 233
E RIL++GLD +GK+ L L G+ +T T GFNV
Sbjct: 166 EKRILVLGLDGSGKSVFLSALSQGDSSKRPSTTKTEGFNV 205
>SB_214| Best HMM Match : Arf (HMM E-Value=0)
Length = 148
Score = 74.1 bits (174), Expect = 1e-13
Identities = 32/94 (34%), Positives = 55/94 (58%)
Frame = +2
Query: 254 LSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAV 433
+ FT +D+GG + R +W+ YF G++F++D D ER+ E+++EL +L++++L
Sbjct: 20 MRFTTFDLGGHRQARRIWKDYFPAVNGIVFIIDCADFERLAESKKELDSLLADEQLSSCP 79
Query: 434 LLIFANKQDLPNAMNAAEITDKLGLIRCATVTGT 535
+LI NK D+P A+ I GL T G+
Sbjct: 80 VLILGNKIDIPGAVGEDYIRQNFGLFGQTTGKGS 113
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 73.3 bits (172), Expect = 2e-13
Identities = 26/85 (30%), Positives = 54/85 (63%)
Frame = +2
Query: 254 LSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAV 433
++ VWD+GGQ + R +W Y + ++++VD+ D +++ ++ EL +L + +L
Sbjct: 65 VTIKVWDIGGQPRFRSMWERYCRGVNCIVYMVDAADHDKLEASKNELHNLLEKPQLAGIP 124
Query: 434 LLIFANKQDLPNAMNAAEITDKLGL 508
+L+ NK+DLPN+++ E+ ++L L
Sbjct: 125 ILVLGNKKDLPNSLDEKELVERLNL 149
Score = 47.2 bits (107), Expect = 2e-05
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +3
Query: 99 FKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEI-VTTIPTIGFNVETVEYKNLVL 263
FK LF K+EM + +VGL +GKTT + + G+ IPT+GFN+ V N+ +
Sbjct: 12 FKSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVSKGNVTI 67
>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 66.5 bits (155), Expect = 3e-11
Identities = 38/81 (46%), Positives = 47/81 (58%)
Frame = +2
Query: 266 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIF 445
VWD+GGQ KIRP W++YF+NT L EL +L E++L LL+F
Sbjct: 66 VWDIGGQRKIRPYWKNYFENTDIL-----------------ELDELLEEEKLIGVPLLVF 108
Query: 446 ANKQDLPNAMNAAEITDKLGL 508
ANKQDL NA AEI+ LGL
Sbjct: 109 ANKQDLMNAATPAEISSNLGL 129
Score = 49.2 bits (112), Expect = 4e-06
Identities = 22/44 (50%), Positives = 33/44 (75%)
Frame = +3
Query: 120 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK 251
+EMRIL++GLD +GKTTIL L +++ PT GFN+++V+ K
Sbjct: 16 REMRILLLGLDNSGKTTILKSLASEDVLHITPTQGFNIKSVQSK 59
>SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 63.3 bits (147), Expect = 2e-10
Identities = 25/50 (50%), Positives = 37/50 (74%)
Frame = +2
Query: 266 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSED 415
+WDVGGQ +R WR+YF++T GLI+VVDS D+ R+ + + EL +L E+
Sbjct: 6 IWDVGGQRSLRSYWRNYFESTDGLIWVVDSADQRRLADCKMELQGLLVEE 55
>SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05)
Length = 259
Score = 52.8 bits (121), Expect = 3e-07
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +2
Query: 248 QKLSFTVWDVGGQDKIRPLWRHYFQNTQ 331
+ L FT+WDVGG K+RPLWRHY+ NTQ
Sbjct: 231 RSLKFTIWDVGGLQKLRPLWRHYYLNTQ 258
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 50.4 bits (115), Expect = 2e-06
Identities = 23/70 (32%), Positives = 35/70 (50%)
Frame = +2
Query: 251 KLSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDA 430
K +WD GQ++ R L Y++ QG+I V D+N RE + E L + +D
Sbjct: 56 KAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDTNSRETFDKLEEWLNEVEMYSTKKDI 115
Query: 431 VLLIFANKQD 460
V ++ NK D
Sbjct: 116 VKMLVGNKID 125
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 42.3 bits (95), Expect = 5e-04
Identities = 18/72 (25%), Positives = 37/72 (51%)
Frame = +2
Query: 248 QKLSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 427
+K+ +WD GQ++ R + + Y+ N G+I D +++ E+ + + + +D
Sbjct: 54 EKVKLQIWDTAGQERFRSITQSYYHNADGVIVTYDITNKKSF-ESLPQWLDDTNRYTSKD 112
Query: 428 AVLLIFANKQDL 463
++ I NK DL
Sbjct: 113 VLIAIVGNKSDL 124
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 42.3 bits (95), Expect = 5e-04
Identities = 18/74 (24%), Positives = 35/74 (47%)
Frame = +2
Query: 248 QKLSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 427
+K+ +WD GQ++ R + Y++ T G+I V D + + L + + D
Sbjct: 24 EKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSADTFVNVKRWLHEI--DQNCDD 81
Query: 428 AVLLIFANKQDLPN 469
+ ++ NK D P+
Sbjct: 82 VIRILVGNKDDCPS 95
>SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 41.5 bits (93), Expect = 8e-04
Identities = 20/40 (50%), Positives = 29/40 (72%)
Frame = +3
Query: 69 FKMGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLK 188
F+M + + L+K LF K E IL++GLD AGKTT+L ++K
Sbjct: 3 FEMFTLLSGLWKYLFQKDEYFILILGLDNAGKTTLLEQIK 42
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 233 GDSRIQKLSFTVWDVGGQDKIRPLW 307
G I + WD+GGQ ++R LW
Sbjct: 66 GKITISHVKLMFWDLGGQQELRTLW 90
>SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 41.5 bits (93), Expect = 8e-04
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 10/80 (12%)
Frame = +2
Query: 254 LSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAV 433
L F ++DVGGQ R W H F+ +IF V + + + EE+ RM+ +L D++
Sbjct: 194 LHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSAYDLVLAEDEEMNRMMESMKLFDSI 253
Query: 434 ----------LLIFANKQDL 463
+++F NK+DL
Sbjct: 254 CNNKWFTDTSIILFLNKKDL 273
>SB_16166| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/44 (43%), Positives = 32/44 (72%)
Frame = +2
Query: 377 EAREELMRMLSEDELRDAVLLIFANKQDLPNAMNAAEITDKLGL 508
E + +L+ +++ EL+ A LLI ANKQD+ +M+ AEI+++L L
Sbjct: 34 ENKFQLVAIIAICELKQAALLILANKQDIKGSMSVAEISEQLNL 77
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +2
Query: 254 LSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAV 433
+ +WD GQ++ R + Y++ G+I V D D+E ++ L + +
Sbjct: 78 IKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQE-IDRYACENVN 136
Query: 434 LLIFANKQDL 463
L+ NK DL
Sbjct: 137 KLLVGNKCDL 146
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +2
Query: 248 QKLSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREEL--MRMLSEDEL 421
+ + +WD GQ++ R + R Y++ G + V D + RE L R L+ +
Sbjct: 142 KSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRETFNSLTNWLTDARTLASPNI 201
Query: 422 RDAVLLIFANKQDL 463
V+++ NK+DL
Sbjct: 202 ---VIILVGNKKDL 212
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 39.1 bits (87), Expect = 0.004
Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 7/126 (5%)
Frame = +2
Query: 254 LSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAV 433
+ +WD GQ++ R L Y+++ G++ + D N+ E + + +SE
Sbjct: 57 IKLQIWDTAGQERFRTLTTAYYRSAHGIVLIYDVNESETFLHL-SQWLEEVSEYACEGVN 115
Query: 434 LLIFANKQDLPNAM-----NAAEITDKLGLIRCATVTGTSKRHAPLPETDCT--RVSTGS 592
++ NK DL + A E +KL + T S + T + GS
Sbjct: 116 TILVGNKCDLIDCRQVGYNTAKEFAEKLDISFIETSAKDSTNVESVFRTMAAELKAKLGS 175
Query: 593 PISSRT 610
P++S T
Sbjct: 176 PLTSPT 181
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/74 (25%), Positives = 35/74 (47%)
Frame = +2
Query: 251 KLSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDA 430
++ WD GQ+K R + + Y++N +I V D +R + LM + ++
Sbjct: 59 RVKLQCWDTAGQEKFRGITQSYYRNADAVILVFDITNRGTFASIPQWLMNVQKYTN-KNI 117
Query: 431 VLLIFANKQDLPNA 472
+ ++ NK DL A
Sbjct: 118 LKVLVGNKTDLKGA 131
>SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 353
Score = 38.7 bits (86), Expect = 0.006
Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Frame = +2
Query: 245 IQKLSFTVWDVGGQDKIRPLWRHYFQNTQGLIF----------VVDSNDRERIGEAREEL 394
++ + F + DVGGQ R W H F+N ++F +V+S+ R+ E++
Sbjct: 190 LETIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDSENRMEESKALF 249
Query: 395 MRMLSEDELRDAVLLIFANKQDL 463
+++ +++ +++F NK+DL
Sbjct: 250 RTIITYPWFQNSSIILFLNKKDL 272
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 37.5 bits (83), Expect = 0.013
Identities = 17/65 (26%), Positives = 35/65 (53%)
Frame = +2
Query: 266 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIF 445
+WD GQ++ R L Y ++++ + V D + E+ + ++M+ ++ AV++I
Sbjct: 216 IWDTAGQERFRCLIHSYIRDSEAALIVFDITNYTSF-ESVGDWVKMVRDERGEKAVIIIV 274
Query: 446 ANKQD 460
NK D
Sbjct: 275 GNKMD 279
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 37.1 bits (82), Expect = 0.018
Identities = 19/76 (25%), Positives = 35/76 (46%)
Frame = +2
Query: 233 GDSRIQKLSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSE 412
GD RI+ +WD GQ++ R + Y++NT G + + D +R+ +
Sbjct: 59 GDVRIK---LQIWDTAGQERFRSITYSYYRNTVGCLIIYDITNRDSFVNVMDWYKEAKQC 115
Query: 413 DELRDAVLLIFANKQD 460
E + V ++ +K D
Sbjct: 116 VEEAEVVFMLVGHKID 131
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 36.7 bits (81), Expect = 0.023
Identities = 18/70 (25%), Positives = 33/70 (47%)
Frame = +2
Query: 254 LSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAV 433
+ F +WD GQ++ L Y++ Q I V D +++ A+ ++ L + V
Sbjct: 70 VKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFARAK-TWVKELQRQASPNIV 128
Query: 434 LLIFANKQDL 463
+ + NK DL
Sbjct: 129 IALSGNKADL 138
>SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1117
Score = 35.9 bits (79), Expect = 0.041
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Frame = +2
Query: 248 QKLSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVV----------DSNDRERIGEAREELM 397
++L F ++DVGGQ R W H F++ +I+ V + R+ E+ +
Sbjct: 241 KRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCVALSAYDLTLEEDESTNRMEESLKLFE 300
Query: 398 RMLSEDELRDAVLLIFANKQDL 463
+++ D +++F NK+DL
Sbjct: 301 SIINNKWFVDTSVILFLNKKDL 322
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 35.9 bits (79), Expect = 0.041
Identities = 18/74 (24%), Positives = 39/74 (52%)
Frame = +2
Query: 248 QKLSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 427
+KL +WD G ++ L R+++ N++ ++ V + + + + +E ++
Sbjct: 56 KKLKIHLWDTLGMEEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKE--CTQSAQVNAPA 113
Query: 428 AVLLIFANKQDLPN 469
A +++ ANK DLPN
Sbjct: 114 AKIVLVANKMDLPN 127
>SB_8302| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 315
Score = 35.9 bits (79), Expect = 0.041
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Frame = +2
Query: 248 QKLSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVV----------DSNDRERIGEAREELM 397
++L F ++DVGGQ R W H F++ +I+ V + R+ E+ +
Sbjct: 193 KRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCVALSAYDLSLEEDESTNRMEESLKLFE 252
Query: 398 RMLSEDELRDAVLLIFANKQDL 463
+++ D +++F NK+DL
Sbjct: 253 SIINNKWFVDTSVILFLNKKDL 274
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 35.1 bits (77), Expect = 0.071
Identities = 18/79 (22%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +2
Query: 236 DSRIQKLSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD---SNDRERIGEAREELMRML 406
++ +Q + +WD GQ++ R + + Y+++ G+I D + + + E++ +
Sbjct: 89 NNSLQDVKLQIWDTAGQERFRTITQSYYRSCNGVIIAYDITKCDTFKNVIRWGEDVQKYA 148
Query: 407 SEDELRDAVLLIFANKQDL 463
E +A+ L+ NK+DL
Sbjct: 149 PE----NAIKLLVGNKKDL 163
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 35.1 bits (77), Expect = 0.071
Identities = 16/72 (22%), Positives = 31/72 (43%)
Frame = +2
Query: 248 QKLSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 427
Q ++ +WD GQ++ R + + YF+ G++ D + + M + E
Sbjct: 943 QCIAIQLWDTAGQERFRSITKQYFRKADGILIFYDVTAESSFTNLK-KWMVSVEEGAEEG 1001
Query: 428 AVLLIFANKQDL 463
++ NK DL
Sbjct: 1002 VAKMVLGNKTDL 1013
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 34.7 bits (76), Expect = 0.094
Identities = 13/72 (18%), Positives = 33/72 (45%)
Frame = +2
Query: 248 QKLSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 427
+K+ +WD GQ++ + Y++ G++ V D + + + ++ + + D
Sbjct: 3 KKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNI-SKWLKKIDDHANED 61
Query: 428 AVLLIFANKQDL 463
++ NK D+
Sbjct: 62 VKRMLVGNKCDM 73
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +2
Query: 266 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIF 445
VWD GQ++ R + Y++ G + V D ++ + L+ + + V+L+
Sbjct: 65 VWDTAGQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHADPTIVVMLV- 123
Query: 446 ANKQDL 463
NK DL
Sbjct: 124 GNKCDL 129
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +2
Query: 239 SRIQKLSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRM 403
+R Q++ +WD GQ++ R L +F++ G + V D + R L ++
Sbjct: 161 TRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSFVNIRNWLSQL 215
>SB_14105| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 320
Score = 33.9 bits (74), Expect = 0.16
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 10/85 (11%)
Frame = +2
Query: 245 IQKLSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELR 424
I + S V DVGGQ R W H+F ++F + + E E+ ML +L
Sbjct: 159 IDESSKQVIDVGGQKNQRKKWIHFFDGVTAVVFFASLSSYDEQLEEEEDTNAMLDSLDLF 218
Query: 425 DAV----------LLIFANKQDLPN 469
+ + ++F NK DL N
Sbjct: 219 EEITHCEFLANTQFILFLNKLDLFN 243
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 33.1 bits (72), Expect = 0.29
Identities = 16/76 (21%), Positives = 35/76 (46%)
Frame = +2
Query: 266 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIF 445
+WD GQ++ R + + YF+ G++ + D + R + + + E + +++
Sbjct: 495 LWDTAGQERFRSIAKSYFRKADGVLLLYDVTCETSFLDVR-DWVEAIEESCSKPVPIMLC 553
Query: 446 ANKQDLPNAMNAAEIT 493
NK D+ + A T
Sbjct: 554 GNKIDIRQSAAAENKT 569
>SB_23535| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 222
Score = 32.7 bits (71), Expect = 0.38
Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 7/108 (6%)
Frame = +2
Query: 344 VVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDL----PNAMNAAEITDKLGLI 511
V++ RERI + EEL R++ E + RD K D+ + + K G
Sbjct: 27 VMEKRRRERINRSLEELKRLVLEAQHRDCSRYTKLEKADILEMTVKHLRTLQSQQKTGCN 86
Query: 512 RCATVTGTS---KRHAPLPETDCTRVSTGSPISSRTPTANRMCANSQT 646
CA T P+P T TR + PI ++P+ + N+ T
Sbjct: 87 GCAVTEVTQFMVPGQHPMPGTYTTRPGS-FPIQLQSPSGDNTERNTST 133
>SB_19345| Best HMM Match : Arf (HMM E-Value=3.3e-05)
Length = 222
Score = 32.7 bits (71), Expect = 0.38
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 520 NRNWYIQATCATSGDGLYEGLDWLSNQL 603
NR W + C + DGL EG+ WL Q+
Sbjct: 194 NRPWQVNMMCVENLDGLLEGMTWLLKQV 221
>SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048)
Length = 472
Score = 32.7 bits (71), Expect = 0.38
Identities = 16/68 (23%), Positives = 36/68 (52%)
Frame = +2
Query: 266 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIF 445
+WD G ++ L R+++ N++ ++ V + + + + +E ++ A +++
Sbjct: 3 LWDTLGMEEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKE--CTQSAQVNAPAAKIVLV 60
Query: 446 ANKQDLPN 469
ANK DLPN
Sbjct: 61 ANKMDLPN 68
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 32.3 bits (70), Expect = 0.50
Identities = 18/82 (21%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Frame = +2
Query: 266 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEA---REELMRMLSEDELRDAVL 436
+W + GQ++ + R Y++ + + D + + A +++L +
Sbjct: 72 IWLIAGQERFSSMTRVYYKGADACVVLFDLERQTTLDGAIKWKKDLDSKYKLHSRKPVPC 131
Query: 437 LIFANKQDLPNAMNAAEITDKL 502
++ NK DLP+ EI DKL
Sbjct: 132 ILVGNKSDLPDRPVDKEIIDKL 153
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 31.9 bits (69), Expect = 0.66
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = +2
Query: 260 FTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLL 439
F +WD GQ++ + L Y+++ I V D R +R L +D V+
Sbjct: 11 FNIWDTAGQERFKSLAPLYYRDAAAAILVYDITIESTFHSLR-PWIRELQRYGPQDIVIA 69
Query: 440 IFANKQD 460
+ NK D
Sbjct: 70 VAGNKCD 76
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 31.9 bits (69), Expect = 0.66
Identities = 10/40 (25%), Positives = 21/40 (52%)
Frame = +2
Query: 248 QKLSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRE 367
+++ +WD GQ++ R + Y++ G I + D + E
Sbjct: 68 KRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEE 107
>SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20)
Length = 1243
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +3
Query: 126 MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVE 236
M++++VG+ GKTT+L LK + + + T+G V+
Sbjct: 667 MKLMVVGIQGYGKTTLLAALKGQPLPSNLSTVGIVVD 703
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +2
Query: 266 VWDVGGQDKIRPLWRHYFQNTQGLIFVVD---SNDRERIGEAREELMRMLSEDELRDAVL 436
+WD GQ++ + L +++ + V D N + + R+E + S + +
Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFKTLDSWRDEFLIQASPRDPENFPF 60
Query: 437 LIFANKQDLPNAMNAAE 487
++ NK DL N +A+
Sbjct: 61 VVLGNKIDLENRAVSAK 77
>SB_15121| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 378
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = -3
Query: 232 TLKPIVGIVVTISPNLSLYRIVV--LPAASKPTINILISFLP-KRPLNKFANIFPIL 71
TL+P++ IV+ + L + RIV+ LP P + I+I +LP RP+ + P L
Sbjct: 241 TLRPVMRIVIYLPTLLPVMRIVIFYLPTL-LPVMRIVICYLPILRPVMRIVIYLPTL 296
>SB_38597| Best HMM Match : Arf (HMM E-Value=0.15)
Length = 188
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 251 KLSFTVWDVGGQDKIRPLWRHYF 319
+ + TV+D+GG KIR +W+ Y+
Sbjct: 3 RFNVTVYDLGGGAKIRGIWKDYY 25
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 114 GKKEMRILMVGLDAAGKTTILYKLKL 191
G M++++VG +A GKTT++++L L
Sbjct: 548 GYYSMKLMLVGREAQGKTTLMHRLML 573
>SB_37006| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-22)
Length = 407
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -3
Query: 250 LYSTVSTLKPIVGIVVTISPNLSLYRIVVLPAASKPTINIL 128
LY ++PI IV + L LY I+ PA KP+ +L
Sbjct: 74 LYIVNCVIQPIFAIVAVSTNTLVLYAIIKTPALHKPSTVLL 114
>SB_57168| Best HMM Match : DUF845 (HMM E-Value=4.1)
Length = 132
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 332 GLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLI 442
G++FVVD+++RER+ E R L + LLI
Sbjct: 38 GVVFVVDASNRERMDECRSILHETKQNPRVSGKPLLI 74
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 248 QKLSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 352
+K+ T+ D GQ++ + YF+ QG+ V D
Sbjct: 399 KKIKLTIGDTAGQERYFSILPAYFRGVQGVFLVFD 433
>SB_51602| Best HMM Match : Glyco_hydro_38C (HMM E-Value=1.1e-31)
Length = 976
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +3
Query: 660 KETMGLRYVNFYLLLNTMYYVRESINVFTDASSGAEAR 773
++T LRYVN LL MYYV+ IN F + E R
Sbjct: 899 EKTAALRYVN--LLALVMYYVKHVINPFILFAMSTEYR 934
>SB_1913| Best HMM Match : Arf (HMM E-Value=0.015)
Length = 777
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +2
Query: 434 LLIFANKQDLPNAMNAAEITDKLGL 508
+L FANK DL +A+++ + T+ LGL
Sbjct: 54 VLFFANKMDLRDALSSIKCTNLLGL 78
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,061,396
Number of Sequences: 59808
Number of extensions: 591778
Number of successful extensions: 1490
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 1360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1484
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2359470773
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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