Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40188
(624 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 156 1e-38
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 156 1e-38
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 156 1e-38
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 49 3e-06
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 49 3e-06
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 49 3e-06
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 45 5e-05
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 40 0.001
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 40 0.002
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 40 0.002
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 39 0.003
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 32 0.38
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 32 0.38
AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical ... 30 1.5
Z81076-4|CAB03053.1| 172|Caenorhabditis elegans Hypothetical pr... 29 3.6
U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like p... 29 3.6
U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like p... 29 3.6
AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like ... 29 3.6
AC025726-9|AAK73924.1| 594|Caenorhabditis elegans Hypothetical ... 28 4.7
AC025726-8|AAT81183.1| 537|Caenorhabditis elegans Hypothetical ... 28 4.7
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 27 8.2
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 27 8.2
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 156 bits (378), Expect = 1e-38
Identities = 71/85 (83%), Positives = 78/85 (91%)
Frame = +2
Query: 2 LRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPG 181
LRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP N+TTEVKSVEMHHE+L EAVPG
Sbjct: 212 LRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLPEAVPG 271
Query: 182 DNVGFNVKNVSVKELRRGYVAGDSK 256
DNVGFNVKNVSVK++RRG V DSK
Sbjct: 272 DNVGFNVKNVSVKDIRRGSVCSDSK 296
Score = 139 bits (337), Expect = 1e-33
Identities = 63/91 (69%), Positives = 73/91 (80%)
Frame = +1
Query: 253 QNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEV 432
+ +P K A F AQVI++NHPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK E
Sbjct: 296 KQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVED 355
Query: 433 NPKSIKSGDSAIVNLVPSKPLCVESSRNSHP 525
PK +KSGD+ IV L+P+KPLCVES + P
Sbjct: 356 FPKFLKSGDAGIVELIPTKPLCVESFTDYAP 386
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +3
Query: 513 EFPPLGRFAVRDMRQTVAV 569
++ PLGRFAVRDMRQTVAV
Sbjct: 383 DYAPLGRFAVRDMRQTVAV 401
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 156 bits (378), Expect = 1e-38
Identities = 71/85 (83%), Positives = 78/85 (91%)
Frame = +2
Query: 2 LRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPG 181
LRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP N+TTEVKSVEMHHE+L EAVPG
Sbjct: 246 LRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLPEAVPG 305
Query: 182 DNVGFNVKNVSVKELRRGYVAGDSK 256
DNVGFNVKNVSVK++RRG V DSK
Sbjct: 306 DNVGFNVKNVSVKDIRRGSVCSDSK 330
Score = 139 bits (337), Expect = 1e-33
Identities = 63/91 (69%), Positives = 73/91 (80%)
Frame = +1
Query: 253 QNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEV 432
+ +P K A F AQVI++NHPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK E
Sbjct: 330 KQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVED 389
Query: 433 NPKSIKSGDSAIVNLVPSKPLCVESSRNSHP 525
PK +KSGD+ IV L+P+KPLCVES + P
Sbjct: 390 FPKFLKSGDAGIVELIPTKPLCVESFTDYAP 420
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +3
Query: 513 EFPPLGRFAVRDMRQTVAV 569
++ PLGRFAVRDMRQTVAV
Sbjct: 417 DYAPLGRFAVRDMRQTVAV 435
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 156 bits (378), Expect = 1e-38
Identities = 71/85 (83%), Positives = 78/85 (91%)
Frame = +2
Query: 2 LRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPG 181
LRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP N+TTEVKSVEMHHE+L EAVPG
Sbjct: 246 LRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLPEAVPG 305
Query: 182 DNVGFNVKNVSVKELRRGYVAGDSK 256
DNVGFNVKNVSVK++RRG V DSK
Sbjct: 306 DNVGFNVKNVSVKDIRRGSVCSDSK 330
Score = 139 bits (337), Expect = 1e-33
Identities = 63/91 (69%), Positives = 73/91 (80%)
Frame = +1
Query: 253 QNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEV 432
+ +P K A F AQVI++NHPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK E
Sbjct: 330 KQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVED 389
Query: 433 NPKSIKSGDSAIVNLVPSKPLCVESSRNSHP 525
PK +KSGD+ IV L+P+KPLCVES + P
Sbjct: 390 FPKFLKSGDAGIVELIPTKPLCVESFTDYAP 420
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +3
Query: 513 EFPPLGRFAVRDMRQTVAV 569
++ PLGRFAVRDMRQTVAV
Sbjct: 417 DYAPLGRFAVRDMRQTVAV 435
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 48.8 bits (111), Expect = 3e-06
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Frame = +2
Query: 17 QDVYKIGGIGTVPVGRVETGVLKPGT-IVVFAPANITTEVKSV----EMHHEALQEAVPG 181
+ VY I G GTV G++E G+LK G I + T VKSV E + + +A PG
Sbjct: 257 EHVYSIVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVKSVISGLESFRKTVDQAEPG 316
Query: 182 DNVGFNVKNVSVKELRRGYV 241
D +G ++ + K++RRG V
Sbjct: 317 DQLGVLLRGLGPKDVRRGCV 336
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 48.8 bits (111), Expect = 3e-06
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Frame = +2
Query: 17 QDVYKIGGIGTVPVGRVETGVLKPGT-IVVFAPANITTEVKSV----EMHHEALQEAVPG 181
+ VY I G GTV G++E G+LK G I + T VKSV E + + +A PG
Sbjct: 258 EHVYSIVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVKSVISGLESFRKTVDQAEPG 317
Query: 182 DNVGFNVKNVSVKELRRGYV 241
D +G ++ + K++RRG V
Sbjct: 318 DQLGVLLRGLGPKDVRRGCV 337
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 48.8 bits (111), Expect = 3e-06
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Frame = +2
Query: 17 QDVYKIGGIGTVPVGRVETGVLKPGT-IVVFAPANITTEVKSV----EMHHEALQEAVPG 181
+ VY I G GTV G++E G+LK G I + T VKSV E + + +A PG
Sbjct: 258 EHVYSIVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVKSVISGLESFRKTVDQAEPG 317
Query: 182 DNVGFNVKNVSVKELRRGYV 241
D +G ++ + K++RRG V
Sbjct: 318 DQLGVLLRGLGPKDVRRGCV 337
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/71 (28%), Positives = 37/71 (52%)
Frame = +2
Query: 29 KIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKN 208
K +GTV +G++E+G ++ G +V P +V + + V GDN+ F +K
Sbjct: 347 KYSEMGTVIIGKMESGCVQKGDTLVVMPNKQPVQVLQIWADDVETERVVAGDNIKFKLKG 406
Query: 209 VSVKELRRGYV 241
+ EL+ G++
Sbjct: 407 IEENELQGGFI 417
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +1
Query: 283 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDS 462
F A+V+VL H I++GY+ VL +A + +D++TG+ K +K +
Sbjct: 431 FDAEVLVLEHRSIIASGYSCVLHIQSAVEEVTVKGVIATIDKKTGEKKRA--KFVKQDEK 488
Query: 463 AIVNLVPSKPLCVE 504
I+ L +P +E
Sbjct: 489 CIMRLESPEPFVLE 502
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3
Query: 510 QEFPPLGRFAVRDMRQTVAV 569
+E+P LGRF +RD +T+A+
Sbjct: 505 KEYPYLGRFTLRDEGKTIAI 524
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/85 (23%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Frame = +2
Query: 14 LQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPAN----ITTEVKSVEMHHEALQEAVPG 181
+ D+Y + G+GT+ G + +G ++ I++ P + + +KS+ + G
Sbjct: 377 IDDIYWVDGVGTIASGTLLSGTIRLNDILLLGPTSNGDFMPIPIKSIHRKRMPVGIVKCG 436
Query: 182 DNVGFNVKNVSVKELRRGYVAGDSK 256
+ F +K + K++R+G V D K
Sbjct: 437 QSASFALKKIPKKDVRKGMVLVDPK 461
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +2
Query: 8 LPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFA--PANITTEVKSVEMHHEALQEAVPG 181
+P+ I G GTV VG +E GVLK G V + T +++ ++++E G
Sbjct: 242 MPIASKTAITGRGTVIVGTLERGVLKKGDKVEIKGDGQTLQTTASDIQVFGKSVKEVRAG 301
Query: 182 DNVGFNVKNVSVKELRRGYVAG 247
D+ G + V ++RG AG
Sbjct: 302 DHCGVLCRGVKGDTVKRGMWAG 323
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +2
Query: 8 LPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFA--PANITTEVKSVEMHHEALQEAVPG 181
+P+ I G GTV VG +E GVLK G V + T +++ ++++E G
Sbjct: 242 MPIASKTAITGRGTVIVGTLERGVLKKGDKVEIKGDGQTLQTTASDIQVFGKSVKEVRAG 301
Query: 182 DNVGFNVKNVSVKELRRGYVAG 247
D+ G + V ++RG AG
Sbjct: 302 DHCGVLCRGVKGDTVKRGMWAG 323
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/85 (23%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Frame = +2
Query: 14 LQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPAN----ITTEVKSVEMHHEALQEAVPG 181
+ D+Y + G+GT+ G + +G ++ I++ P + + +KS+ + G
Sbjct: 378 IDDIYWVDGVGTIASGTLLSGTIRLNDILLLGPTSNGDFMPIPIKSIHRKRCLVGIVKCG 437
Query: 182 DNVGFNVKNVSVKELRRGYVAGDSK 256
+ F +K + K++R+G V D K
Sbjct: 438 QSASFALKKIPKKDVRQGMVLVDPK 462
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 31.9 bits (69), Expect = 0.38
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = +2
Query: 8 LPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDN 187
+ + + I G GTV G V GVL+ T + F N VK++E + + + G
Sbjct: 204 IAIDHCFAIKGQGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLETWKQRVGQVAAGAR 263
Query: 188 VGFNV 202
F V
Sbjct: 264 AAFLV 268
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 31.9 bits (69), Expect = 0.38
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = +2
Query: 8 LPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDN 187
+ + + I G GTV G V GVL+ T + F N VK++E + + + G
Sbjct: 163 IAIDHCFAIKGQGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLETWKQRVGQVAAGAR 222
Query: 188 VGFNV 202
F V
Sbjct: 223 AAFLV 227
>AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical
protein F49D11.10 protein.
Length = 766
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +2
Query: 83 KPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKN 208
KPGTI F P ITTE K H L+ + GD +++
Sbjct: 360 KPGTIQWFDPVTITTESKM----HVTLENTIDGDMTSRGIRS 397
>Z81076-4|CAB03053.1| 172|Caenorhabditis elegans Hypothetical
protein F35C5.4 protein.
Length = 172
Score = 28.7 bits (61), Expect = 3.6
Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Frame = -1
Query: 234 PRRNSLTDTFFTLKPTLSPG-TASWRASWCISTDLTSVVMLAGAKTTMVPGFN--TPVST 64
P + FT +S + S R S +S D T V + + VP + VST
Sbjct: 28 PEDGATVGNTFTQSSAVSESQSTSERTSRSVSPDSTPVRVTTSTLLSTVPTSQDISGVST 87
Query: 63 LPTGTVPIPPILY 25
PT +PPI Y
Sbjct: 88 APTTKATLPPITY 100
>U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform b protein.
Length = 564
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +1
Query: 346 LDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDSAIVNLVPSKPLCVESSRNS 519
L C + C+ + +K+K + T KSTE + + G+ IV L + ES R S
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTET--ERLLQGE--IVALQKEVSIVSESLRKS 510
>U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform a protein.
Length = 690
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +1
Query: 346 LDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDSAIVNLVPSKPLCVESSRNS 519
L C + C+ + +K+K + T KSTE + + G+ IV L + ES R S
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTET--ERLLQGE--IVALQKEVSIVSESLRKS 510
>AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like
protein protein.
Length = 690
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +1
Query: 346 LDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDSAIVNLVPSKPLCVESSRNS 519
L C + C+ + +K+K + T KSTE + + G+ IV L + ES R S
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTET--ERLLQGE--IVALQKEVSIVSESLRKS 510
>AC025726-9|AAK73924.1| 594|Caenorhabditis elegans Hypothetical
protein Y71G12B.23a protein.
Length = 594
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +2
Query: 185 NVGFNV---KNVSVKELRRGYVAGDSKTTHLRVLQILQLKSL 301
NVGFN V +KE + Y K+ L++L QLKSL
Sbjct: 48 NVGFNAFLKLQVDIKESLKNYSKFGKKSNFLKLLTAKQLKSL 89
>AC025726-8|AAT81183.1| 537|Caenorhabditis elegans Hypothetical
protein Y71G12B.23b protein.
Length = 537
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +2
Query: 185 NVGFNV---KNVSVKELRRGYVAGDSKTTHLRVLQILQLKSL 301
NVGFN V +KE + Y K+ L++L QLKSL
Sbjct: 48 NVGFNAFLKLQVDIKESLKNYSKFGKKSNFLKLLTAKQLKSL 89
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.5 bits (58), Expect = 8.2
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = -1
Query: 225 NSLTDTFFTLKPTLSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFNTPVSTLPTGTV 46
++ T T T T +PGT + +T S GA TT PG V+ PT +
Sbjct: 2017 SNFTTTTTTSTTTTTPGTGPTVTAAQTTTTTPST---PGAGTTGTPGTGPTVTAAPTNGI 2073
Query: 45 PIPPILYTSCRG 10
+ T+ +G
Sbjct: 2074 STTQPIITTTKG 2085
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.5 bits (58), Expect = 8.2
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = -1
Query: 225 NSLTDTFFTLKPTLSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFNTPVSTLPTGTV 46
++ T T T T +PGT + +T S GA TT PG V+ PT +
Sbjct: 2017 SNFTTTTTTSTTTTTPGTGPTVTAAQTTTTTPST---PGAGTTGTPGTGPTVTAAPTNGI 2073
Query: 45 PIPPILYTSCRG 10
+ T+ +G
Sbjct: 2074 STTQPIITTTKG 2085
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 27.5 bits (58), Expect = 8.2
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = -1
Query: 225 NSLTDTFFTLKPTLSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFNTPVSTLPTGTV 46
++ T T T T +PGT + +T S GA TT PG V+ PT +
Sbjct: 2017 SNFTTTTTTSTTTTTPGTGPTVTAAQTTTTTPST---PGAGTTGTPGTGPTVTAAPTNGI 2073
Query: 45 PIPPILYTSCRG 10
+ T+ +G
Sbjct: 2074 STTQPIITTTKG 2085
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,928,026
Number of Sequences: 27780
Number of extensions: 366351
Number of successful extensions: 1105
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1099
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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