Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40188
(624 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 169 1e-44
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 169 1e-44
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 164 7e-43
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 151 4e-39
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 22 5.6
AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. 22 5.6
AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. 22 5.6
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 21 7.4
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 21 7.4
DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II lar... 21 9.8
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 9.8
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 21 9.8
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 21 9.8
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 169 bits (412), Expect = 1e-44
Identities = 80/85 (94%), Positives = 82/85 (96%)
Frame = +2
Query: 2 LRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPG 181
LRLPLQDVYKIGGIGTVPVGRVETGVLKPG +V FAPA +TTEVKSVEMHHEALQEAVPG
Sbjct: 189 LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAGLTTEVKSVEMHHEALQEAVPG 248
Query: 182 DNVGFNVKNVSVKELRRGYVAGDSK 256
DNVGFNVKNVSVKELRRGYVAGDSK
Sbjct: 249 DNVGFNVKNVSVKELRRGYVAGDSK 273
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 169 bits (412), Expect = 1e-44
Identities = 80/85 (94%), Positives = 82/85 (96%)
Frame = +2
Query: 2 LRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPG 181
LRLPLQDVYKIGGIGTVPVGRVETGVLKPG +V FAPA +TTEVKSVEMHHEALQEAVPG
Sbjct: 246 LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAGLTTEVKSVEMHHEALQEAVPG 305
Query: 182 DNVGFNVKNVSVKELRRGYVAGDSK 256
DNVGFNVKNVSVKELRRGYVAGDSK
Sbjct: 306 DNVGFNVKNVSVKELRRGYVAGDSK 330
Score = 166 bits (403), Expect = 2e-43
Identities = 75/91 (82%), Positives = 82/91 (90%)
Frame = +1
Query: 253 QNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEV 432
+NNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFA+IKEK DRR GK+TE
Sbjct: 330 KNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFADIKEKCDRRNGKTTEE 389
Query: 433 NPKSIKSGDSAIVNLVPSKPLCVESSRNSHP 525
NPKSIKSGD+AIV LVPSKP+C E+ + P
Sbjct: 390 NPKSIKSGDAAIVMLVPSKPMCAEAFQEFPP 420
Score = 46.4 bits (105), Expect = 2e-07
Identities = 22/26 (84%), Positives = 22/26 (84%), Gaps = 1/26 (3%)
Frame = +3
Query: 495 MC-RVLQEFPPLGRFAVRDMRQTVAV 569
MC QEFPPLGRFAVRDMRQTVAV
Sbjct: 410 MCAEAFQEFPPLGRFAVRDMRQTVAV 435
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 164 bits (398), Expect = 7e-43
Identities = 76/85 (89%), Positives = 81/85 (95%)
Frame = +2
Query: 2 LRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPG 181
LRLPLQDVYKIGGIGTVPVGRVETG+LKPG +V FAPA +TTEVKSVEMHHEAL EA+PG
Sbjct: 246 LRLPLQDVYKIGGIGTVPVGRVETGILKPGMLVTFAPAALTTEVKSVEMHHEALTEALPG 305
Query: 182 DNVGFNVKNVSVKELRRGYVAGDSK 256
DNVGFNVKN+SVKELRRGYVAGDSK
Sbjct: 306 DNVGFNVKNISVKELRRGYVAGDSK 330
Score = 163 bits (397), Expect = 9e-43
Identities = 74/91 (81%), Positives = 82/91 (90%)
Frame = +1
Query: 253 QNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEV 432
+N PP+GAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE
Sbjct: 330 KNQPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEE 389
Query: 433 NPKSIKSGDSAIVNLVPSKPLCVESSRNSHP 525
NPKSIKSGD+AIV L P+KP+CVE+ + P
Sbjct: 390 NPKSIKSGDAAIVMLQPTKPMCVEAFQEFPP 420
Score = 46.4 bits (105), Expect = 2e-07
Identities = 22/26 (84%), Positives = 22/26 (84%), Gaps = 1/26 (3%)
Frame = +3
Query: 495 MC-RVLQEFPPLGRFAVRDMRQTVAV 569
MC QEFPPLGRFAVRDMRQTVAV
Sbjct: 410 MCVEAFQEFPPLGRFAVRDMRQTVAV 435
Score = 21.8 bits (44), Expect = 5.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 186 LSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFN 79
L PG A ++T++ SV M A T +PG N
Sbjct: 272 LKPGMLVTFAPAALTTEVKSVEMHHEALTEALPGDN 307
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 151 bits (367), Expect = 4e-39
Identities = 69/79 (87%), Positives = 74/79 (93%)
Frame = +1
Query: 253 QNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEV 432
+N PP+GAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE
Sbjct: 41 KNQPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEE 100
Query: 433 NPKSIKSGDSAIVNLVPSK 489
NPKSIKSGD+AIV L P+K
Sbjct: 101 NPKSIKSGDAAIVMLQPTK 119
Score = 84.6 bits (200), Expect = 7e-19
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +2
Query: 134 KSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSK 256
KSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSK
Sbjct: 1 KSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSK 41
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 21.8 bits (44), Expect = 5.6
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +3
Query: 330 RLHTSIGLPHCPHC 371
RLHT HC HC
Sbjct: 30 RLHTGEKPYHCSHC 43
>AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein.
Length = 136
Score = 21.8 bits (44), Expect = 5.6
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +1
Query: 433 NPKSIKSGDSAIVNLVPSKPLCVESSR 513
NP+ G +V L PS P C ++ +
Sbjct: 66 NPEHKPPGPKDLVYLEPSPPFCEKNPK 92
>AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein.
Length = 135
Score = 21.8 bits (44), Expect = 5.6
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +1
Query: 433 NPKSIKSGDSAIVNLVPSKPLCVESSR 513
NP+ G +V L PS P C ++ +
Sbjct: 67 NPEHKPPGPKDLVYLEPSPPFCEKNPK 93
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 21.4 bits (43), Expect = 7.4
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -1
Query: 294 LSCKICSTLRWVVLESPAT 238
++ +I TL W+++E P T
Sbjct: 635 IALQIVLTLVWMIIEPPGT 653
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.4 bits (43), Expect = 7.4
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -1
Query: 294 LSCKICSTLRWVVLESPAT 238
++ +I TL W+++E P T
Sbjct: 725 IALQIVLTLVWMIIEPPGT 743
>DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II large
subunit protein.
Length = 296
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 552 SCHGQQNDRGVGIPGG 505
+C GQQN G IP G
Sbjct: 247 ACVGQQNVEGKRIPFG 262
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +2
Query: 521 TPRSFCCP*HEADSCCRVIKAVNF 592
T ++FCC + D + K +NF
Sbjct: 453 TTKTFCCKGYCMDLLKELSKTINF 476
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.0 bits (42), Expect = 9.8
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = -1
Query: 414 STTVNFFFDFCKFAGNVGSVAIQYWCVTV*DLTRMVKHNDLSCKIC 277
ST+ N F K G G + CVT R HN + + C
Sbjct: 77 STSENKTFPTIKIVGYKGRALVVVSCVTKDQPYRPHPHNLVGKEAC 122
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.0 bits (42), Expect = 9.8
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = -1
Query: 414 STTVNFFFDFCKFAGNVGSVAIQYWCVTV*DLTRMVKHNDLSCKIC 277
ST+ N F K G G + CVT R HN + + C
Sbjct: 77 STSENKTFPTIKIVGYKGRALVVVSCVTKDQPYRPHPHNLVGKEAC 122
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,960
Number of Sequences: 438
Number of extensions: 4058
Number of successful extensions: 21
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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