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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40188
         (624 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ...   153   1e-37
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ...   153   1e-37
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ...   153   1e-37
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ...   153   1e-37
At1g35550.1 68414.m04414 elongation factor Tu C-terminal domain-...    96   2e-20
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide...    58   6e-09
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,...    53   1e-07
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,...    45   4e-05
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E...    42   3e-04
At4g29900.1 68417.m04254 calcium-transporting ATPase, plasma mem...    29   3.3  
At3g44350.1 68416.m04765 no apical meristem (NAM) family protein...    29   3.3  
At1g27900.1 68414.m03419 RNA helicase, putative similar to SP|Q1...    29   3.3  
At4g25650.1 68417.m03693 Rieske [2Fe-2S] domain-containing prote...    28   4.4  
At5g13580.1 68418.m01570 ABC transporter family protein                27   7.7  
At4g01910.1 68417.m00251 DC1 domain-containing protein contains ...    27   7.7  
At1g54440.1 68414.m06210 3'-5' exonuclease domain-containing pro...    27   7.7  
At1g35610.1 68414.m04421 DC1 domain-containing protein contains ...    27   7.7  

>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
           identical to SWISS-PROT:P13905 elongation factor 1-alpha
           (EF-1-alpha) [Arabidopsis thaliana]
          Length = 449

 Score =  153 bits (370), Expect = 1e-37
 Identities = 69/85 (81%), Positives = 79/85 (92%)
 Frame = +2

Query: 2   LRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPG 181
           LRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP  +TTEVKSVEMHHE+L EA+PG
Sbjct: 234 LRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPG 293

Query: 182 DNVGFNVKNVSVKELRRGYVAGDSK 256
           DNVGFNVKNV+VK+L+RGYVA +SK
Sbjct: 294 DNVGFNVKNVAVKDLKRGYVASNSK 318



 Score =  124 bits (298), Expect = 6e-29
 Identities = 51/85 (60%), Positives = 70/85 (82%)
 Frame = +1

Query: 253 QNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEV 432
           +++P KGAA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+EI  K+DRR+GK  E 
Sbjct: 318 KDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEK 377

Query: 433 NPKSIKSGDSAIVNLVPSKPLCVES 507
            PK +K+GD+ +V + P+KP+ VE+
Sbjct: 378 EPKFLKNGDAGMVKMTPTKPMVVET 402



 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 22/36 (61%), Positives = 25/36 (69%)
 Frame = +3

Query: 513 EFPPLGRFAVRDMRQTVAVESSRLSTSRRVGVAKVT 620
           E+PPLGRFAVRDMRQTVAV   +    +    AKVT
Sbjct: 405 EYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTGAKVT 440


>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
           identical to GB:CAA34456 from [Arabidopsis thaliana]
           (Plant Mol. Biol. 14 (1), 107-110 (1990))
          Length = 449

 Score =  153 bits (370), Expect = 1e-37
 Identities = 69/85 (81%), Positives = 79/85 (92%)
 Frame = +2

Query: 2   LRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPG 181
           LRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP  +TTEVKSVEMHHE+L EA+PG
Sbjct: 234 LRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPG 293

Query: 182 DNVGFNVKNVSVKELRRGYVAGDSK 256
           DNVGFNVKNV+VK+L+RGYVA +SK
Sbjct: 294 DNVGFNVKNVAVKDLKRGYVASNSK 318



 Score =  124 bits (298), Expect = 6e-29
 Identities = 51/85 (60%), Positives = 70/85 (82%)
 Frame = +1

Query: 253 QNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEV 432
           +++P KGAA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+EI  K+DRR+GK  E 
Sbjct: 318 KDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEK 377

Query: 433 NPKSIKSGDSAIVNLVPSKPLCVES 507
            PK +K+GD+ +V + P+KP+ VE+
Sbjct: 378 EPKFLKNGDAGMVKMTPTKPMVVET 402



 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 22/36 (61%), Positives = 25/36 (69%)
 Frame = +3

Query: 513 EFPPLGRFAVRDMRQTVAVESSRLSTSRRVGVAKVT 620
           E+PPLGRFAVRDMRQTVAV   +    +    AKVT
Sbjct: 405 EYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTGAKVT 440


>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
           identical to GB:CAA34456 from [Arabidopsis thaliana]
           (Plant Mol. Biol. 14 (1), 107-110 (1990))
          Length = 449

 Score =  153 bits (370), Expect = 1e-37
 Identities = 69/85 (81%), Positives = 79/85 (92%)
 Frame = +2

Query: 2   LRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPG 181
           LRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP  +TTEVKSVEMHHE+L EA+PG
Sbjct: 234 LRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPG 293

Query: 182 DNVGFNVKNVSVKELRRGYVAGDSK 256
           DNVGFNVKNV+VK+L+RGYVA +SK
Sbjct: 294 DNVGFNVKNVAVKDLKRGYVASNSK 318



 Score =  124 bits (298), Expect = 6e-29
 Identities = 51/85 (60%), Positives = 70/85 (82%)
 Frame = +1

Query: 253 QNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEV 432
           +++P KGAA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+EI  K+DRR+GK  E 
Sbjct: 318 KDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEK 377

Query: 433 NPKSIKSGDSAIVNLVPSKPLCVES 507
            PK +K+GD+ +V + P+KP+ VE+
Sbjct: 378 EPKFLKNGDAGMVKMTPTKPMVVET 402



 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 22/36 (61%), Positives = 25/36 (69%)
 Frame = +3

Query: 513 EFPPLGRFAVRDMRQTVAVESSRLSTSRRVGVAKVT 620
           E+PPLGRFAVRDMRQTVAV   +    +    AKVT
Sbjct: 405 EYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTGAKVT 440


>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
           identical to GB:CAA34456 from [Arabidopsis thaliana]
           (Plant Mol. Biol. 14 (1), 107-110 (1990))
          Length = 449

 Score =  153 bits (370), Expect = 1e-37
 Identities = 69/85 (81%), Positives = 79/85 (92%)
 Frame = +2

Query: 2   LRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPG 181
           LRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP  +TTEVKSVEMHHE+L EA+PG
Sbjct: 234 LRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPG 293

Query: 182 DNVGFNVKNVSVKELRRGYVAGDSK 256
           DNVGFNVKNV+VK+L+RGYVA +SK
Sbjct: 294 DNVGFNVKNVAVKDLKRGYVASNSK 318



 Score =  124 bits (298), Expect = 6e-29
 Identities = 51/85 (60%), Positives = 70/85 (82%)
 Frame = +1

Query: 253 QNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEV 432
           +++P KGAA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+EI  K+DRR+GK  E 
Sbjct: 318 KDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEK 377

Query: 433 NPKSIKSGDSAIVNLVPSKPLCVES 507
            PK +K+GD+ +V + P+KP+ VE+
Sbjct: 378 EPKFLKNGDAGMVKMTPTKPMVVET 402



 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 22/36 (61%), Positives = 25/36 (69%)
 Frame = +3

Query: 513 EFPPLGRFAVRDMRQTVAVESSRLSTSRRVGVAKVT 620
           E+PPLGRFAVRDMRQTVAV   +    +    AKVT
Sbjct: 405 EYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTGAKVT 440


>At1g35550.1 68414.m04414 elongation factor Tu C-terminal
           domain-containing protein similar to SP|P13905
           Elongation factor 1-alpha (EF-1-alpha) {Arabidopsis
           thaliana}; contains Pfam profile PF03143: Elongation
           factor Tu C-terminal domain
          Length = 104

 Score = 95.9 bits (228), Expect = 2e-20
 Identities = 40/68 (58%), Positives = 53/68 (77%)
 Frame = +1

Query: 304 LNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDSAIVNLVP 483
           +NH GQI NGYTPVLDCHT+HIA KF+EI  K+D RTG   E  PK +K+ ++AI+N+ P
Sbjct: 1   MNHLGQIKNGYTPVLDCHTSHIAVKFSEILTKIDWRTGHEIEKEPKFLKNSEAAIINMTP 60

Query: 484 SKPLCVES 507
           +KP+ VE+
Sbjct: 61  TKPMVVEA 68



 Score = 37.9 bits (84), Expect = 0.005
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +3

Query: 516 FPPLGRFAVRDMRQTVAV 569
           +PPLGRFA+RDMRQTV V
Sbjct: 72  YPPLGRFAIRDMRQTVGV 89


>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
           identical to SWISS-PROT:P17745 elongation factor Tu,
           chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
          Length = 476

 Score = 57.6 bits (133), Expect = 6e-09
 Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
 Frame = +2

Query: 8   LPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTE--VKSVEMHHEALQEAVPG 181
           L ++DV+ I G GTV  GRVE G +K G  V       T    V  VEM  + L EA+ G
Sbjct: 290 LAVEDVFSITGRGTVATGRVERGTVKVGETVDLVGLRETRSYTVTGVEMFQKILDEALAG 349

Query: 182 DNVGFNVKNVSVKELRRGYV 241
           DNVG  ++ +   +++RG V
Sbjct: 350 DNVGLLLRGIQKADIQRGMV 369


>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
           putative similar to mitochondrial elongation factor Tu
           [Arabidopsis thaliana] gi|1149571|emb|CAA61511
          Length = 454

 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
 Frame = +2

Query: 8   LPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVF-----APANITTEVKSVEMHHEALQEA 172
           +P++DV+ I G GTV  GR+E GV+K G  V           + + V  VEM  + L   
Sbjct: 270 MPIEDVFSIQGRGTVATGRIEQGVIKVGEEVEILGLREGGVPLKSTVTGVEMFKKILDNG 329

Query: 173 VPGDNVGFNVKNVSVKELRRGYV 241
             GDNVG  ++ +  ++++RG V
Sbjct: 330 QAGDNVGLLLRGLKREDIQRGMV 352


>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
           putative similar to EF-1-alpha-related GTP-binding
           protein gi|1009232|gb|AAA79032
          Length = 532

 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 27/102 (26%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
 Frame = +2

Query: 5   RLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGD 184
           R+P+ D +K   +GTV +G+VE+G ++ G  +V  P     +V ++    + ++ A PG+
Sbjct: 332 RMPIIDKFK--DMGTVVMGKVESGSIREGDSLVVMPNKEQVKVVAIYCDEDKVKRAGPGE 389

Query: 185 NVGFNVKNVSVKELRRGYVAGD------SKTTHLRVLQILQL 292
           N+   +  +  +++  G+V         + T  +  LQIL+L
Sbjct: 390 NLRVRITGIEDEDILSGFVLSSIVNPVPAVTEFVAQLQILEL 431



 Score = 41.1 bits (92), Expect = 6e-04
 Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
 Frame = +1

Query: 259 NPPKGAADFTAQVIVLN--HPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEV 432
           NP     +F AQ+ +L        + GY  +L  H     C+  E+K ++D +T K  + 
Sbjct: 414 NPVPAVTEFVAQLQILELLDNAIFTAGYKAILHIHAVVEECEIIELKSQIDLKTRKPMKK 473

Query: 433 NPKSIKSGDSAIVNLVPSKPLCVE 504
               +K+G + +  +  +  +C+E
Sbjct: 474 KVLFVKNGAAVVCRIQVTNSICIE 497


>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
           EF-1-alpha, putative contains similarity to
           SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
           [Aeropyrum pernix]
          Length = 667

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
 Frame = +2

Query: 2   LRLPLQDVYKIGGIGTVPV-GRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVP 178
           L +P+ D  +    G V   G++E G ++PG+ V+  P+     ++S+E   +A   A  
Sbjct: 468 LLMPICDAVRSTSQGQVSACGKLEAGAVRPGSKVMVMPSGDQGTIRSLERDSQACTIARA 527

Query: 179 GDNVGFNVKNVSVKELRRGYVAGD-----SKTTHLRVLQILQLKSLCLTILVKSQTVTH 340
           GDNV   ++ +   ++  G V        S  THL  L +L L+     IL+ SQ   H
Sbjct: 528 GDNVALALQGIDANQVMAGDVLCHPDFPVSVATHLE-LMVLVLEG-ATPILLGSQLEFH 584



 Score = 35.5 bits (78), Expect = 0.029
 Identities = 22/86 (25%), Positives = 38/86 (44%)
 Frame = +1

Query: 262 PPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPK 441
           P   A      V+VL     I  G       H A  A    ++   +D +TG+ T+ +P+
Sbjct: 555 PVSVATHLELMVLVLEGATPILLGSQLEFHVHHAKEAATVVKLVAMLDPKTGQPTKKSPR 614

Query: 442 SIKSGDSAIVNLVPSKPLCVESSRNS 519
            + +  SA++ +    P+CVE+   S
Sbjct: 615 CLTAKQSAMLEVSLQNPVCVETFSES 640


>At4g29900.1 68417.m04254 calcium-transporting ATPase, plasma
           membrane-type, putative / Ca2+-ATPase, putative (ACA10)
           identical to SP|Q9SZR1 Potential calcium-transporting
           ATPase 10, plasma membrane-type (EC 3.6.3.8)
           (Ca(2+)-ATPase isoform 10) {Arabidopsis thaliana};
           similar to SP|Q9LF79 Calcium-transporting ATPase 8,
           plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform
           8) {Arabidopsis thaliana}
          Length = 1069

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -1

Query: 177 GTASWRASWCISTDLTSVVMLAGAKTTMVPGFNT 76
           G + WR  W  S DLT ++++  A  ++  G  T
Sbjct: 178 GRSFWRFVWEASQDLTLIILIVAAVASLALGIKT 211


>At3g44350.1 68416.m04765 no apical meristem (NAM) family protein
           Tobacco elicitor-responsive gene (TERN), NAC-domain
           protein, Nicotiana tabacum, EMBL:AB021178
          Length = 228

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = -2

Query: 542 DSKTTEGWEFLEDSTHRGLE-GTKLTMAESPDLMDFGLTSVDLPVRRSTFS 393
           D + TE +    +    G+E  ++ T++ SP+    G   VDLPV  +T +
Sbjct: 155 DRRPTEAYAIERNLPSNGVETSSRATISTSPETSHSGGNQVDLPVNATTIT 205


>At1g27900.1 68414.m03419 RNA helicase, putative similar to
           SP|Q14562 ATP-dependent helicase DDX8 (RNA helicase
           HRH1) (DEAH-box protein 8) {Homo sapiens}; contains Pfam
           profiles PF04408: Helicase associated domain (HA2),
           PF00271: Helicase conserved C-terminal domain
          Length = 700

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = -1

Query: 198 LKPTLSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFNTP 73
           L+P+LS        + C+S  LT V ML+ A+TT++P  + P
Sbjct: 428 LEPSLSRTLIEANETGCLSQALTVVAMLS-AETTLLPARSKP 468


>At4g25650.1 68417.m03693 Rieske [2Fe-2S] domain-containing protein
           similar to cell death suppressor protein lls1 from Zea
           mays [gi:1935909], Rieske iron-sulfur protein Tic55 from
           Pisum sativum [gi:2764524]; contains Pfam PF00355 Rieske
           [2Fe-2S] domain
          Length = 536

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1

Query: 376 KFAEIKEKVDRRTGKSTEVNPKSI 447
           +F + KEK+DR  GK  E+N K +
Sbjct: 258 RFPKPKEKIDREGGKPLEINVKKL 281


>At5g13580.1 68418.m01570 ABC transporter family protein
          Length = 727

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -1

Query: 147 ISTDLTSVVMLAGAKTTMVPGFNTPVSTLPTGTVP 43
           IS  ++   +++GA TT     ++PVST+PT   P
Sbjct: 384 ISASISKGKLVSGATTTTHSSGSSPVSTIPTFANP 418


>At4g01910.1 68417.m00251 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 651

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 76  CVETRYHCCLCPRQHHY*SQIC 141
           C   R+HC LC R+ +Y S  C
Sbjct: 73  CSNLRFHCDLCGRRTNYLSYYC 94


>At1g54440.1 68414.m06210 3'-5' exonuclease domain-containing
           protein / helicase and RNase D C-terminal
           domain-containing protein / HRDC domain-containing
           protein similar to SP|Q01780 Polymyositis/scleroderma
           autoantigen 2 {Homo sapiens}; contains Pfam profiles
           PF00570: HRDC domain, PF01612: 3'-5' exonuclease
          Length = 738

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = +1

Query: 388 IKEKVDR-RTGKSTEVNPKSIKSGDSAIVNLVPSKPLCVESSRNSHPSV-VLLS 543
           +K K++  +T     + PK  K+G  A  + + SK +CV+ S+       VLLS
Sbjct: 573 LKRKLESDKTVVEKNIEPKIEKTGTEASASSLSSKKVCVDDSKKQSSGFGVLLS 626


>At1g35610.1 68414.m04421 DC1 domain-containing protein contains
           Pfam protein PF03107 DC1 domain
          Length = 612

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 92  YLVSTHQFQLCRRARYQYHRFCIRLA 15
           Y + +HQF  C++  Y  H  C  L+
Sbjct: 334 YPIVSHQFYHCKKCNYSLHEVCAGLS 359


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,166,517
Number of Sequences: 28952
Number of extensions: 342936
Number of successful extensions: 1038
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1035
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1265787216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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