Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40187
         (816 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.3  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           24   1.3  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   5.1  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   6.7  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    22   6.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 554  DCAPGSTWSNQCNSC 598
            +CAPG  W N  N C
Sbjct: 1306 NCAPGLHWDNNKNIC 1320



 Score = 24.2 bits (50), Expect = 1.3
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +1

Query: 55   CAPGSSWSNQCNSC 96
            CAPG  W N  N C
Sbjct: 1307 CAPGLHWDNNKNIC 1320



 Score = 23.8 bits (49), Expect = 1.7
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +3

Query: 306  CAPGSTWSNQCNSC 347
            CAPG  W N  N C
Sbjct: 1307 CAPGLHWDNNKNIC 1320



 Score = 22.6 bits (46), Expect = 3.8
 Identities = 11/25 (44%), Positives = 12/25 (48%), Gaps = 4/25 (16%)
 Frame = +3

Query: 420  DCAPNTTWKNECNTC-W---CTSDG 482
            +CAP   W N  N C W    T DG
Sbjct: 1306 NCAPGLHWDNNKNICDWPEKATCDG 1330



 Score = 21.4 bits (43), Expect = 8.9
 Identities = 11/24 (45%), Positives = 11/24 (45%), Gaps = 4/24 (16%)
 Frame = +1

Query: 172  CAPKTMWKNECNTC-W---CTSDG 231
            CAP   W N  N C W    T DG
Sbjct: 1307 CAPGLHWDNNKNICDWPEKATCDG 1330


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 21/97 (21%), Positives = 38/97 (39%)
 Frame = -3

Query: 571 RSRSAISALDQLRLLGSVISDHSTLVHMGLPSEVHQHVLHSFFHVVFGAQSFFGSLMCSA 392
           RS   + ALD+  +  S  S  S      L +       +++  + + A +    ++   
Sbjct: 112 RSLEDLLALDESTVSSSTSSIPSPSTTDDLSTNPTPPPHYTYQIIPYEALNVDDHILSDP 171

Query: 391 QASSLQMAYPSALHLQLLHWFDHVDPGAHSLPWISSD 281
                 + +  A  L LLH  D + PG +S   +S D
Sbjct: 172 SLMDADLEFKGAQDLSLLHVSDSLSPGIYSEQSLSPD 208



 Score = 21.8 bits (44), Expect = 6.7
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -1

Query: 624 MAYPSALHLQLLHWFDHVDPGAQSLPWISSD 532
           + +  A  L LLH  D + PG  S   +S D
Sbjct: 178 LEFKGAQDLSLLHVSDSLSPGIYSEQSLSPD 208


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -2

Query: 452 FIFPCSIRRTVFFWLVNVFSTSFVT 378
           FIF   + + + F++ N+FS    T
Sbjct: 298 FIFMGQLEKPIVFYVANIFSLDLDT 322


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = +1

Query: 202 CNTCWCTSDGKPMCTRMDASLITLPRSL 285
           CN  W    G P   R  A L+   RSL
Sbjct: 170 CNRYWQCQGGYPRLQRCPAMLVFDRRSL 197


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 4/29 (13%)
 Frame = -3

Query: 424 QSFFGSLM----CSAQASSLQMAYPSALH 350
           +++F  LM    CS     L+ A P ALH
Sbjct: 44  KNYFNCLMERGTCSPDGEELKKALPDALH 72


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,874
Number of Sequences: 336
Number of extensions: 5821
Number of successful extensions: 25
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)