Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40187
(816 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 4.5
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 4.5
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 4.5
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 23 4.5
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 23 4.5
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 22 5.9
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 22 5.9
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 22 5.9
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 22 5.9
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 5.9
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 5.9
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 22 7.8
DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse tr... 22 7.8
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 7.8
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.6 bits (46), Expect = 4.5
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +3
Query: 627 VVTKPVLNTLTSLRKTVPPK--TMWKNECNTCWCTSDGKPMCT 749
VV +P N +T R+ PP T NE TC T+ G CT
Sbjct: 396 VVYRPGENPVTQKREGGPPTGATTGPNEIVTC--TNCGPNPCT 436
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.6 bits (46), Expect = 4.5
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +3
Query: 627 VVTKPVLNTLTSLRKTVPPK--TMWKNECNTCWCTSDGKPMCT 749
VV +P N +T R+ PP T NE TC T+ G CT
Sbjct: 416 VVYRPGENPVTQKREGGPPTGATTGPNEIVTC--TNCGPNPCT 456
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.6 bits (46), Expect = 4.5
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +3
Query: 627 VVTKPVLNTLTSLRKTVPPK--TMWKNECNTCWCTSDGKPMCT 749
VV +P N +T R+ PP T NE TC T+ G CT
Sbjct: 365 VVYRPGENPVTQKREGGPPTGATTGPNEIVTC--TNCGPNPCT 405
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 22.6 bits (46), Expect = 4.5
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -3
Query: 235 VYHPKCTNTCCIHFSTSSSA 176
++HP C +H +TSSS+
Sbjct: 400 LHHPNCKINRKVHHTTSSSS 419
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.5
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -3
Query: 307 HSLPWISSDFLGVLLVMHPS*CTW 236
H L W +S+F G+ ++ P W
Sbjct: 65 HHLKWNASEFAGIRVIRVPYNRVW 88
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.2 bits (45), Expect = 5.9
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 617 YAICSDEACAEHIDEPKKDCAAE 685
+ IC E ++ DE KKD A +
Sbjct: 34 FTICVPEIYSKECDEMKKDSAVK 56
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.2 bits (45), Expect = 5.9
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 617 YAICSDEACAEHIDEPKKDCAAE 685
+ IC E ++ DE KKD A +
Sbjct: 34 FTICVPEIYSKECDEMKKDSAVK 56
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 22.2 bits (45), Expect = 5.9
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3
Query: 79 STTTIPERILCPGSAQTSWELT 14
S + +PE ILCP T E T
Sbjct: 433 SESCLPEEILCPHFNVTDGETT 454
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.2 bits (45), Expect = 5.9
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 617 YAICSDEACAEHIDEPKKDCAAE 685
+ IC E ++ DE KKD A +
Sbjct: 34 FTICVPEIYSKECDEMKKDSAVK 56
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.2 bits (45), Expect = 5.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 126 TNAVSIGIAPTTVTLVRPRRSRSAFSALDQL 34
T++ S I+P + PRR RS+ S+L L
Sbjct: 1822 TSSTSSDISPMSEQKSLPRRGRSSRSSLRTL 1852
Score = 21.8 bits (44), Expect = 7.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 628 TNGVSIGIAPTTVTLVRPRRSRSAISALDQL 536
T+ S I+P + PRR RS+ S+L L
Sbjct: 1822 TSSTSSDISPMSEQKSLPRRGRSSRSSLRTL 1852
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.2 bits (45), Expect = 5.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 126 TNAVSIGIAPTTVTLVRPRRSRSAFSALDQL 34
T++ S I+P + PRR RS+ S+L L
Sbjct: 1818 TSSTSSDISPMSEQKSLPRRGRSSRSSLRTL 1848
Score = 21.8 bits (44), Expect = 7.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 628 TNGVSIGIAPTTVTLVRPRRSRSAISALDQL 536
T+ S I+P + PRR RS+ S+L L
Sbjct: 1818 TSSTSSDISPMSEQKSLPRRGRSSRSSLRTL 1848
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 21.8 bits (44), Expect = 7.8
Identities = 12/52 (23%), Positives = 21/52 (40%)
Frame = -3
Query: 814 WVSNFSRERQFPKLLIMSTPILVHMGLPSEVHQHVLHSFFHIVFGGTVFLRL 659
WV + + L +S +L + P + HS+ H + F+RL
Sbjct: 61 WVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRL 112
>DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse
transcriptase protein.
Length = 127
Score = 21.8 bits (44), Expect = 7.8
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +1
Query: 373 FVVTKLVLNTLTSQKKTVRRIL 438
F ++K++L+ + KKT+ RIL
Sbjct: 12 FRLSKVMLDHTINSKKTIMRIL 33
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.8 bits (44), Expect = 7.8
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = -1
Query: 603 HLQLLHWFDHVDPGAQSLP 547
H L H+ H DPG LP
Sbjct: 275 HTGLGHYGHHPDPGEVDLP 293
Score = 21.8 bits (44), Expect = 7.8
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = -2
Query: 101 HLQLLHWFDHDDPGAHSLP 45
H L H+ H DPG LP
Sbjct: 275 HTGLGHYGHHPDPGEVDLP 293
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 264,856
Number of Sequences: 438
Number of extensions: 6122
Number of successful extensions: 32
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25974678
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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