Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40184
         (849 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        23   4.7  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   6.2  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   8.2  

>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 18/63 (28%), Positives = 31/63 (49%)
 Frame = +2

Query: 119 KTKLFYGNDD*VLPMLYLPGMLLV**FIVLIKERLIGLTTMELKVRRKIHTSRLCLG*YS 298
           K    + ++D +LP +YL   L     + L+  R+       L++ R++ TSR  +  Y 
Sbjct: 243 KMSWLFESEDVLLPSVYLRWNLTSGERVGLVGGRV----KEALRIARQMTTSRKKVLPYY 298

Query: 299 WYK 307
           WYK
Sbjct: 299 WYK 301


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 555 KKRFCHYYDIKVSVTNYKM 499
           K +  HY D K SV NY +
Sbjct: 571 KNQCRHYLDAKSSVQNYSL 589


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 287 PGITWRYGFFFSLLI 243
           P  T+RYGF F L +
Sbjct: 221 PPFTYRYGFSFLLYV 235


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,285
Number of Sequences: 438
Number of extensions: 5500
Number of successful extensions: 34
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)