Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40183
(830 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 54 1e-07
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 54 1e-07
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 53 2e-07
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 53 2e-07
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 53 2e-07
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 53 2e-07
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 53 2e-07
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 53 2e-07
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 49 5e-06
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 49 5e-06
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 48 8e-06
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 48 8e-06
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 46 4e-05
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 46 4e-05
U50069-1|AAB37559.2| 884|Caenorhabditis elegans Hypothetical pr... 31 1.0
AL132949-21|CAB61098.1| 866|Caenorhabditis elegans Hypothetical... 30 2.3
Z81532-2|CAB04324.1| 290|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z78542-6|CAB01749.2| 695|Caenorhabditis elegans Hypothetical pr... 29 5.4
CU457743-1|CAM36364.1| 692|Caenorhabditis elegans Hypothetical ... 28 7.1
AL032648-3|CAA21695.1| 319|Caenorhabditis elegans Hypothetical ... 28 7.1
Z93383-11|CAI58635.1| 279|Caenorhabditis elegans Hypothetical p... 28 9.4
AF003136-10|AAK21378.2| 1281|Caenorhabditis elegans High inciden... 28 9.4
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 512 LVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKR-GDYK 688
++NPDS+S AVL NA YFK W +KF + T R+F+ S++ + ++ R + K
Sbjct: 153 IINPDSISEELVAVLTNAFYFKANWQTKFKKESTYKREFFSSENSKRETEFLHSRNSNRK 212
Query: 689 YGES 700
Y E+
Sbjct: 213 YSEN 216
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 512 LVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKR-GDYK 688
++NPDS+S AVL NA YFK W +KF + T R+F+ S++ + ++ R + K
Sbjct: 153 IINPDSISEELVAVLTNAFYFKANWQTKFKKESTYKREFFSSENSKRETEFLHSRNSNRK 212
Query: 689 YGES 700
Y E+
Sbjct: 213 YSEN 216
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/82 (30%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +3
Query: 267 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 443
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 444 KNTVAAKSINDWVEENTNNRIK 509
A++IN++V ENT + IK
Sbjct: 121 NKEATAEAINNFVRENTGDHIK 142
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +2
Query: 512 LVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMY 670
++ DS++S AVL NA+YFK W +KF + T +F+ S D ++ ++
Sbjct: 144 IIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLH 196
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/82 (30%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +3
Query: 267 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 443
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 444 KNTVAAKSINDWVEENTNNRIK 509
A++IN++V ENT + IK
Sbjct: 121 NKEATAEAINNFVRENTGDHIK 142
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +2
Query: 512 LVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMY 670
++ DS++S AVL NA+YFK W +KF + T +F+ S D ++ ++
Sbjct: 144 IIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLH 196
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/82 (30%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +3
Query: 267 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 443
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 444 KNTVAAKSINDWVEENTNNRIK 509
A++IN++V ENT + IK
Sbjct: 121 NKEATAEAINNFVRENTGDHIK 142
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +2
Query: 512 LVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMY 670
++ DS++S AVL NA+YFK W +KF + T +F+ S D ++ ++
Sbjct: 144 IIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLH 196
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/82 (30%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +3
Query: 267 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 443
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 444 KNTVAAKSINDWVEENTNNRIK 509
A++IN++V ENT + IK
Sbjct: 121 NKEATAEAINNFVRENTGDHIK 142
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +2
Query: 512 LVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMY 670
++ DS++S AVL NA+YFK W +KF + T +F+ S D ++ ++
Sbjct: 144 IIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLH 196
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/82 (30%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +3
Query: 267 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 443
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 444 KNTVAAKSINDWVEENTNNRIK 509
A++IN++V ENT + IK
Sbjct: 121 NKEATAEAINNFVRENTGDHIK 142
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +2
Query: 512 LVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMY 670
++ DS++S AVL NA+YFK W +KF + T +F+ S D ++ ++
Sbjct: 144 IIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLH 196
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/82 (30%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +3
Query: 267 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 443
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 444 KNTVAAKSINDWVEENTNNRIK 509
A++IN++V ENT + IK
Sbjct: 121 NKEATAEAINNFVRENTGDHIK 142
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +2
Query: 512 LVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMY 670
++ DS++S AVL NA+YFK W +KF + T +F+ S D ++ ++
Sbjct: 144 IIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLH 196
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 48.8 bits (111), Expect = 5e-06
Identities = 20/62 (32%), Positives = 40/62 (64%)
Frame = +3
Query: 324 GVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNR 503
GVE K+ N+V+V+ + +++ ++ + +++DFS+ AAK++N +VE +TN +
Sbjct: 77 GVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFVENHTNGK 136
Query: 504 IK 509
IK
Sbjct: 137 IK 138
Score = 48.0 bits (109), Expect = 8e-06
Identities = 22/53 (41%), Positives = 36/53 (67%)
Frame = +2
Query: 509 DLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 667
DL+ DS ++A A LVNA+YFK W SKF + T+ R+F+ S+ ++ ++P +
Sbjct: 139 DLIPADSANNAFA-FLVNAMYFKADWQSKFAKESTTGREFFTSEAESRQIPFL 190
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 48.8 bits (111), Expect = 5e-06
Identities = 20/62 (32%), Positives = 40/62 (64%)
Frame = +3
Query: 324 GVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNR 503
GVE K+ N+V+V+ + +++ ++ + +++DFS+ AAK++N +VE +TN +
Sbjct: 77 GVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFVENHTNGK 136
Query: 504 IK 509
IK
Sbjct: 137 IK 138
Score = 48.8 bits (111), Expect = 5e-06
Identities = 22/60 (36%), Positives = 40/60 (66%)
Frame = +2
Query: 509 DLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYK 688
DL+ DS ++A A LVNA+YFK W SKF + T+ R+F+ S+ ++ ++P + + +++
Sbjct: 139 DLIPADSANNAFA-FLVNAMYFKADWQSKFAKESTTGREFFTSEAESRQIPFLTELDEHR 197
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 48.0 bits (109), Expect = 8e-06
Identities = 23/63 (36%), Positives = 38/63 (60%)
Frame = +2
Query: 509 DLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYK 688
D++ PD+L A +L+NAI+F+G W KF E ++ +F +S + VPM+ + DY
Sbjct: 149 DMIKPDNLKDVDA-ILINAIFFQGDWRRKFGE--PAESNFSISATENRLVPMLRETRDYF 205
Query: 689 YGE 697
Y +
Sbjct: 206 YNK 208
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/64 (31%), Positives = 37/64 (57%)
Frame = +3
Query: 315 SIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENT 494
S+ VE +AN+++V + + F R+ +N++ IDF K+ AAK +N ++ E+T
Sbjct: 84 SVNDVETLIANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKIMNQFISEST 143
Query: 495 NNRI 506
+I
Sbjct: 144 KGKI 147
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 48.0 bits (109), Expect = 8e-06
Identities = 23/63 (36%), Positives = 38/63 (60%)
Frame = +2
Query: 509 DLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYK 688
D++ PD+L A +L+NAI+F+G W KF E ++ +F +S + VPM+ + DY
Sbjct: 149 DMIKPDNLKDVDA-ILINAIFFQGDWRRKFGE--PAESNFSISATENRLVPMLRETRDYF 205
Query: 689 YGE 697
Y +
Sbjct: 206 YNK 208
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/64 (31%), Positives = 37/64 (57%)
Frame = +3
Query: 315 SIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENT 494
S+ VE +AN+++V + + F R+ +N++ IDF K+ AAK +N ++ E+T
Sbjct: 84 SVNDVETLIANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKIMNQFISEST 143
Query: 495 NNRI 506
+I
Sbjct: 144 KGKI 147
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/82 (29%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +3
Query: 267 DDAIRTEFASKSRDLRS-IKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 443
D+ + F+ S+++++ KGVE+ +ANKVY+ G ++ F + + +D +++D +
Sbjct: 60 DEQLVEHFSFVSKEVKNGTKGVEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLT 119
Query: 444 KNTVAAKSINDWVEENTNNRIK 509
A + IN +V TN +IK
Sbjct: 120 -TPAAVQEINSFVNTATNGKIK 140
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +2
Query: 509 DLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 667
++ DS+ A A +L+N+IYFK W KFD S++DF + + K+ M
Sbjct: 141 NIATQDSIKDAIA-LLINSIYFKADWDDKFDGMSVSEQDFTLHTGEKKKIKFM 192
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/82 (29%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +3
Query: 267 DDAIRTEFASKSRDLRS-IKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 443
D+ + F+ S+++++ KGVE+ +ANKVY+ G ++ F + + +D +++D +
Sbjct: 60 DEQLVEHFSFVSKEVKNGTKGVEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLT 119
Query: 444 KNTVAAKSINDWVEENTNNRIK 509
A + IN +V TN +IK
Sbjct: 120 -TPAAVQEINSFVNTATNGKIK 140
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +2
Query: 509 DLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 667
++ DS+ A A +L+N+IYFK W KFD S++DF + + K+ M
Sbjct: 141 NIATQDSIKDAIA-LLINSIYFKADWDDKFDGMSVSEQDFTLHTGEKKKIKFM 192
>U50069-1|AAB37559.2| 884|Caenorhabditis elegans Hypothetical
protein C09B9.3 protein.
Length = 884
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/93 (21%), Positives = 39/93 (41%), Gaps = 5/93 (5%)
Frame = -1
Query: 488 FFYPIVNRLSCDCILREINVLDVRIEDVPGNDCKILV*FSTIMNVYFIRHFKLNA----- 324
+++PIV C++ + V + + + +D V F N+Y + +
Sbjct: 268 YYFPIVTVFQFICLMGWLKVAEALLNPLGEDDDDFEVNFLIDSNIYMTMSYNCDVATDSY 327
Query: 323 FN*SKITAFTREFCSYSIVVREAIAFKSSSWVS 225
FN K+ FT+ +I+ + +K S W S
Sbjct: 328 FNFFKVNPFTKSTYKNNIIFQILFRWKGSVWKS 360
>AL132949-21|CAB61098.1| 866|Caenorhabditis elegans Hypothetical
protein Y53F4B.24 protein.
Length = 866
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 587 SSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESADLNAQLN*NYLN 739
S +FD+ L +D Y +KD+ ++ R D++Y A ++ + YLN
Sbjct: 648 SGQFDQTLYNDLTLYTAKDEETDETLVSNRSDFEYTNDA-ISLKSAHGYLN 697
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 587 SSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESADLNAQLN*NYLN 739
S +FD+ L +D Y +KD+ ++ R D++Y A ++ + YLN
Sbjct: 140 SGQFDQILYNDLTLYTAKDEETDETLVSNRSDFEYTNDA-ISLKSAHGYLN 189
>Z81532-2|CAB04324.1| 290|Caenorhabditis elegans Hypothetical
protein F36F2.2 protein.
Length = 290
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 244 KALHGFHHQKLKLTEREEAAPKMPRGQRFSL 152
K L H ++ T EE+ P P+GQRF L
Sbjct: 163 KGLEEVHEIEVDKTVIEESIPNQPKGQRFDL 193
>Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical protein
C05A9.1 protein.
Length = 1283
Score = 29.1 bits (62), Expect = 4.1
Identities = 25/85 (29%), Positives = 44/85 (51%)
Frame = +1
Query: 55 AAMAAVTNLSNVLKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETH 234
A A ++ V++N D + R+ T VV + S V++A S+ L +A G TH
Sbjct: 1202 ATSALDSDSEKVVQNALDTASERLSTVVVAHR--LSTVVNADSIAV-LKNGKVAEQG-TH 1257
Query: 235 EELLKAMASLTTMLYEQNSRVKAVI 309
EELL+ + ++ +Q +V+ +I
Sbjct: 1258 EELLRKRSIYWRLVQKQGIQVETLI 1282
>Z78542-6|CAB01749.2| 695|Caenorhabditis elegans Hypothetical
protein F20D1.7 protein.
Length = 695
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 46 IAIAAMAAVTNLSNVLKN-GNDNFTARMFTEVV-KNNPGKSVVLSAFSVLPPLAQLALAS 219
+A+ ++ + N+L+N G D+ R V+ +NN KS+ + F +P L L L+
Sbjct: 124 MALTSLLELDLSDNMLENLGADSIHIRSIQRVILRNNQIKSIGVHVFRYMPTLKMLDLSG 183
Query: 220 DGET 231
+ T
Sbjct: 184 NNMT 187
>CU457743-1|CAM36364.1| 692|Caenorhabditis elegans Hypothetical
protein K09E10.1 protein.
Length = 692
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = -1
Query: 512 NLNAVIGIFFYPIVNRLSCDCILREINVLDVRIEDVPGNDCKILV*FSTIMNVYFIRHFK 333
N+N + IFF I N LS + ++ + + +++ + PG K+ N+ F +
Sbjct: 376 NINCALLIFFLFISNFLSSNFLVNKDAIQEIKFRNTPGQLSKVSSLDGVTPNMSFDDAAR 435
Query: 332 LNAF 321
LN +
Sbjct: 436 LNKY 439
>AL032648-3|CAA21695.1| 319|Caenorhabditis elegans Hypothetical
protein Y54G9A.4 protein.
Length = 319
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 694 SIFIIAAFIHHGYFDCFVFAHVEVTVTGQSL 602
SI +AFI H +F+CF F E V+ S+
Sbjct: 172 SIIFTSAFILHVFFECFAFGIQEDAVSVTSI 202
>Z93383-11|CAI58635.1| 279|Caenorhabditis elegans Hypothetical
protein F54B8.16 protein.
Length = 279
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -1
Query: 137 TSVNILAVKLSFPFLSTLERFVTAAIAAMAIVNKQMIVFMFV 12
TSV + +K +F F+ TLERF++ N++ I F ++
Sbjct: 87 TSVTMGIIKGTFAFMITLERFISVFFPIHYRNNRRKIPFYWI 128
>AF003136-10|AAK21378.2| 1281|Caenorhabditis elegans High incidence of
males (increasedx chromosome loss) protein 1, isoform a
protein.
Length = 1281
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +1
Query: 196 LAQLALASDGETHEELLKAMASLTTMLYEQNSRVKAVIFDQLKALSLK 339
+AQ+A+ + +ELL+ + LT YE++S + +V Q+ AL LK
Sbjct: 911 IAQVAMKDFTKAEKELLRLESLLTKKQYERHSLLHSVKLGQI-ALPLK 957
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,852,432
Number of Sequences: 27780
Number of extensions: 355984
Number of successful extensions: 1028
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1027
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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