Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40183
(830 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g25240.1 68415.m03020 serpin, putative / serine protease inhi... 57 1e-08
At2g26390.1 68415.m03167 serpin, putative / serine protease inhi... 56 2e-08
At3g45220.1 68416.m04880 serpin, putative / serine protease inhi... 56 4e-08
At1g63280.1 68414.m07154 serpin-related / serine protease inhibi... 51 1e-06
At2g14540.1 68415.m01628 serpin family protein / serine protease... 50 2e-06
At1g51330.1 68414.m05772 serpin-related / serine protease inhibi... 50 2e-06
At1g64030.1 68414.m07252 serpin family protein / serine protease... 49 3e-06
At1g47710.1 68414.m05302 serpin, putative / serine protease inhi... 48 6e-06
At2g35580.1 68415.m04357 serpin family protein / serine protease... 46 3e-05
At1g62170.1 68414.m07013 serpin family protein / serine protease... 45 5e-05
At1g72410.1 68414.m08374 COP1-interacting protein-related simila... 30 2.2
At2g02750.1 68415.m00218 pentatricopeptide (PPR) repeat-containi... 29 2.9
At1g33390.1 68414.m04133 helicase domain-containing protein simi... 29 2.9
At3g01420.1 68416.m00065 pathogen-responsive alpha-dioxygenase, ... 29 3.8
At5g37490.1 68418.m04515 U-box domain-containing protein similar... 29 5.0
At2g39930.1 68415.m04907 isoamylase, putative / starch debranchi... 28 6.6
At3g54850.1 68416.m06077 armadillo/beta-catenin repeat family pr... 28 8.7
>At2g25240.1 68415.m03020 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 324
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/61 (47%), Positives = 39/61 (63%)
Frame = +2
Query: 524 DSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESA 703
D++ S+T VL NA+YFKGAWSSKFD +T DF++ ++KVP M D +Y S
Sbjct: 95 DTIRSSTL-VLANAVYFKGAWSSKFDANMTKKNDFHLLDGTSVKVPFMTNYED-QYLRSY 152
Query: 704 D 706
D
Sbjct: 153 D 153
Score = 31.1 bits (67), Expect = 0.94
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +3
Query: 327 VELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVEENTNNR 503
+ L +AN V++ L +F + + + + +DF SK + +N W E +TN
Sbjct: 25 LRLSIANGVWIDKFFSLKLSFKDLLENSYKATCSQVDFASKPSEVIDEVNTWAEVHTNGL 84
Query: 504 IK 509
IK
Sbjct: 85 IK 86
>At2g26390.1 68415.m03167 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 389
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = +2
Query: 551 VLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGD 682
+L NA+YFK AWS KFD +LT D DF++ T+KVP M D
Sbjct: 168 ILANAVYFKAAWSRKFDAKLTKDNDFHLLDGNTVKVPFMMSYKD 211
>At3g45220.1 68416.m04880 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 393
Score = 55.6 bits (128), Expect = 4e-08
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Frame = +2
Query: 509 DLVNPDSLSSATAAVLV--NAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM--YKR 676
++++ DS+ + ++L+ NA+YFKGAWS KFD +LT DF++ +KVP M YK+
Sbjct: 152 EILSDDSIKTIRESMLILANAVYFKGAWSKKFDAKLTKSYDFHLLDGTMVKVPFMTNYKK 211
Query: 677 GDYKY 691
+Y
Sbjct: 212 QYLEY 216
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +3
Query: 327 VELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS-KNTVAAKSINDWVEENTNNR 503
+ L A V++ +F + + +N+ +DF+ K +N W E +TN
Sbjct: 90 LHLSTAYGVWIDKSLSFKPSFKDLLENSYNATCNQVDFATKPAEVINEVNAWAEVHTNGL 149
Query: 504 IK 509
IK
Sbjct: 150 IK 151
>At1g63280.1 68414.m07154 serpin-related / serine protease
inhibitor-related similar to protein zx [Hordeum vulgare
subsp. vulgare] GI:19071, serpin [Triticum aestivum]
GI:1885346
Length = 120
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/53 (45%), Positives = 33/53 (62%)
Frame = +2
Query: 509 DLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 667
DL+ S+ S T V NA+YFKGAW +KFD+ T D +F+ K+ + VP M
Sbjct: 30 DLLPRGSVKSETVQVYGNALYFKGAWENKFDKSSTKDNEFHQGKE--VHVPFM 80
>At2g14540.1 68415.m01628 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 407
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/47 (42%), Positives = 31/47 (65%)
Frame = +2
Query: 527 SLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 667
S++S T + NA+YFKGAW FD+ +T D+ F++ K++ VP M
Sbjct: 187 SVTSLTNWIYGNALYFKGAWEKAFDKSMTRDKPFHLLNGKSVSVPFM 233
>At1g51330.1 68414.m05772 serpin-related / serine protease
inhibitor-related similar to serpin [Hordeum vulgare
subsp. vulgare] CAA64599.1 GI:1197577
Length = 193
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/61 (37%), Positives = 38/61 (62%)
Frame = +2
Query: 509 DLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYK 688
+L+ P S+++ T + NA+YFKGAW +KF + +T + F++ K + VP M K + K
Sbjct: 53 NLLPPGSVTNQTIKIYGNALYFKGAWENKFGKSMTIHKPFHLVNGKQVLVPFM-KSYERK 111
Query: 689 Y 691
Y
Sbjct: 112 Y 112
>At1g64030.1 68414.m07252 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311, serpin [Triticum
aestivum] GI:871551; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 385
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +2
Query: 509 DLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 667
DL+ S++S T + NA+ FKGAW F++ T D DFY+ ++ VP M
Sbjct: 153 DLLPDGSVTSLTNKIYANALSFKGAWKRPFEKYYTRDNDFYLVNGTSVSVPFM 205
Score = 35.9 bits (79), Expect = 0.033
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +3
Query: 306 DLRSIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWV 482
D + G ++ AN +++ D F + + F + +DF S+ K +N WV
Sbjct: 84 DRSATGGPKITAANGLWIDKSLPTDPKFKDLFENFFKAVYVPVDFRSEAEEVRKEVNSWV 143
Query: 483 EENTNNRIK 509
E +TNN IK
Sbjct: 144 EHHTNNLIK 152
>At1g47710.1 68414.m05302 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 391
Score = 48.4 bits (110), Expect = 6e-06
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +2
Query: 527 SLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 667
S S T + NA+YFKG W+ KFDE LT + +F++ + P M
Sbjct: 158 SADSMTKLIFANALYFKGTWNEKFDESLTQEGEFHLLDGNKVTAPFM 204
>At2g35580.1 68415.m04357 serpin family protein / serine protease
inhibitor family protein similar to protein zx [Hordeum
vulgare subsp. vulgare] GI:19071, serpin [Triticum
aestivum] GI:1885350; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 374
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +2
Query: 518 NPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 667
NP S + T + NA++F G W S+FD LT D DF++ ++VP M
Sbjct: 157 NPKS-APLTDHIFANALFFNGRWDSQFDPSLTKDSDFHLLDGTKVRVPFM 205
>At1g62170.1 68414.m07013 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
GI:9937311 from [Cucurbita maxima]; contains Pfam
profile PF00079: Serpin (serine protease inhibitor)
Length = 433
Score = 45.2 bits (102), Expect = 5e-05
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +2
Query: 509 DLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 667
DL+ S++S T V +A+YFKG W K+ + +T + FY+ ++ VP M
Sbjct: 217 DLLPRGSVTSLTDRVYGSALYFKGTWEEKYSKSMTKCKPFYLLNGTSVSVPFM 269
>At1g72410.1 68414.m08374 COP1-interacting protein-related similar
to COP1-Interacting ProteinI 7 (CIP7) [Arabidopsis
thaliana] GI:3327870
Length = 1163
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -3
Query: 174 REDNAFPWIIFHYFGKHSGCEVIVSIFEYIREICDG 67
R D +++F KHS CE+ VS E ++ G
Sbjct: 2 RSDTVLDYVVFELSPKHSKCELFVSSNEQTEKLASG 37
>At2g02750.1 68415.m00218 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 613
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 171 EDNAFPWIIFHYFGKHSGCEVIVSIFEYIRE 79
+D F ++ +GKH CE + IFE +RE
Sbjct: 434 KDPVFWNVMISGYGKHGECESAIEIFELLRE 464
>At1g33390.1 68414.m04133 helicase domain-containing protein similar
to kurz protein [Drosophila melanogaster] GI:5869803;
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain
Length = 1237
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +1
Query: 133 EVVKN--NPGKSVVLSAFSVLPPLAQLALASDGETHEELL 246
E VKN +PGK VL +++L P AQL + + E E L+
Sbjct: 636 EQVKNKFSPGKLRVLPLYAMLSPAAQLRVFEEVEKEERLV 675
>At3g01420.1 68416.m00065 pathogen-responsive alpha-dioxygenase,
putative similar to pathogen-inducible alpha-dioxygenase
[Nicotiana attenuata] GI:12539609; contains Pfam profile
PF03098: Animal haem peroxidase
Length = 639
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +3
Query: 378 DENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKI*LIRTRSAQPQRLFS 557
DE V DV++ DV+ +D +A K I + T I + ++ TR + R F+
Sbjct: 516 DEEAIEVLDDVYDGDVEELDLLVGLMAEKKIKGFAISETAFYIFL-IMATRRLEADRFFT 574
Query: 558 S 560
S
Sbjct: 575 S 575
>At5g37490.1 68418.m04515 U-box domain-containing protein similar to
immediate-early fungal elicitor protein CMPG1
[Petroselinum crispum] GI:14582200; contains Pfam
profile PF04564: U-box domain
Length = 435
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -3
Query: 198 ERRQHRKCREDNAFPWIIFHYFGKHSGCEVIVSIFEYI 85
E ++RKC +N+ W++ F K SG E + + I
Sbjct: 153 ESEKNRKCVNENSVGWVLCDCFDKFSGDEKLTFMLNEI 190
>At2g39930.1 68415.m04907 isoamylase, putative / starch debranching
enzyme, putative similar to isoamylase from [Solanum
tuberosum] GI:27728145, [Triticum aestivum] GI:17932898,
[Hordeum vulgare] GI:21314275, [Oryza sativa]
GI:3252794; contains Pfam profiles PF00128: Alpha
amylase catalytic domain, PF02922: Isoamylase N-terminal
domain
Length = 783
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 620 RDFYVSKDKTIKVPMMYKRGDYKYGESADLNAQLN*NYLN 739
R+F+VS + VPM+Y +Y + + + N + NY+N
Sbjct: 592 RNFFVSLMVSQGVPMIYMGDEYGHTKGGNNNTYCHDNYMN 631
>At3g54850.1 68416.m06077 armadillo/beta-catenin repeat family
protein / U-box domain-containing family protein
contains Pfam domain, PF00514:
Armadillo/beta-catenin-like repeats and Pfam, PF04564:
U-box domain
Length = 632
Score = 27.9 bits (59), Expect = 8.7
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Frame = +1
Query: 49 AIAAMAAVTNLSNVLKNGN----DNFTARMFT-EVVKNNPGKSVVLSAFSVLPPLAQLAL 213
AI A+T++ VLKNG+ +N A +F+ V+ N V + A + L ++L
Sbjct: 423 AIVDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDEN---KVAIGAAGAIQAL--ISL 477
Query: 214 ASDGETHEELLKAMASLTTMLYEQN-SR-VKAVIFDQLKAL 330
+G + A A +Y+ N SR VK I D L L
Sbjct: 478 LEEGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRL 518
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,008,947
Number of Sequences: 28952
Number of extensions: 337991
Number of successful extensions: 998
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 998
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1911862400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -