Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40180
(735 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. 25 0.84
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 24 1.1
AY052395-1|AAL15469.1| 76|Tribolium castaneum tryptophan oxyge... 24 1.5
AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan oxyge... 24 1.5
AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan oxyge... 24 1.5
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 23 2.6
DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase rever... 23 3.4
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 22 5.9
EF592536-1|ABQ95982.1| 598|Tribolium castaneum beta-N-acetylglu... 21 7.8
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 21 7.8
>DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein.
Length = 414
Score = 24.6 bits (51), Expect = 0.84
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = -2
Query: 488 YLFMNLTYKYRLTSKYLAFLIWSSHYNELNSIYYN 384
Y F TYKY S FL N+L ++ N
Sbjct: 17 YPFQGTTYKYTGCSDNDGFLPGQGRVNQLGGVFIN 51
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 24.2 bits (50), Expect = 1.1
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -2
Query: 692 YNQQLSYTHYLSQQYL 645
YNQ +S THY + +Y+
Sbjct: 365 YNQDVSCTHYQNPEYI 380
>AY052395-1|AAL15469.1| 76|Tribolium castaneum tryptophan
oxygenase protein.
Length = 76
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 472 KFINK*KLLSKLNSRPVHKEVFF 540
K + +LLS+ N++PVH E F
Sbjct: 32 KILEAQRLLSEQNNQPVHDEHLF 54
>AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 472 KFINK*KLLSKLNSRPVHKEVFF 540
K + +LLS+ N++PVH E F
Sbjct: 32 KILEAQRLLSEQNNQPVHDEHLF 54
>AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 472 KFINK*KLLSKLNSRPVHKEVFF 540
K + +LLS+ N++PVH E F
Sbjct: 32 KILEAQRLLSEQNNQPVHDEHLF 54
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 23.0 bits (47), Expect = 2.6
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 613 TLNAKYLIVKCKYCWER*CVYDNC 684
T +AKYL +KCK + NC
Sbjct: 778 TCDAKYLEIKCKRIYNEKQCCKNC 801
>DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase reverse
transcriptase protein.
Length = 596
Score = 22.6 bits (46), Expect = 3.4
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -1
Query: 603 LVGILLKLYF*IKKTFDISNLKKNFFVYRS 514
L G L +LY SNL K+ F++R+
Sbjct: 312 LSGCLCELYMAFMDRLYFSNLDKDAFIHRT 341
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -3
Query: 688 TSNYHTHTTSPNNIY 644
T+N H H TS +N Y
Sbjct: 287 TANGHGHNTSSHNYY 301
>EF592536-1|ABQ95982.1| 598|Tribolium castaneum
beta-N-acetylglucosaminidase NAG1 protein.
Length = 598
Score = 21.4 bits (43), Expect = 7.8
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +2
Query: 194 HVFPFRFRKRQPYTLYSYYNKKNV-ATKIIAKI 289
H FPF T Y Y+ K V A + +A+I
Sbjct: 250 HSFPFTAESLPDLTKYGAYSPKKVYAPEEVAEI 282
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 21.4 bits (43), Expect = 7.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -2
Query: 491 FYLFMNLTYKYRLTSKYLAFLIWSSHYNELNSIYY 387
+Y F+ L Y Y AF+I++ H L IYY
Sbjct: 104 YYAFIILLCVYYF---YYAFIIFTVHLLFLLCIYY 135
Score = 21.4 bits (43), Expect = 7.8
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = -2
Query: 491 FYLFMNLTYKYRLTSKYLAFLIWSSHYNELNSIYYNYNSFTKKKRFTTRH*M--AAVIFF 318
+Y + L + + Y AF+I++ H L IY+ + +F T H + A IFF
Sbjct: 134 YYFVVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAFI----IFTMHLLFCCAFIFF 189
Query: 317 RLFL 306
+ L
Sbjct: 190 NMHL 193
Score = 21.4 bits (43), Expect = 7.8
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2
Query: 443 YLAFLIWSSHYNELNSIYYNY 381
Y AF++++ H L IYY Y
Sbjct: 242 YYAFILFTVHLLLLVCIYYFY 262
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,932
Number of Sequences: 336
Number of extensions: 3569
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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