Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40180
         (735 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    24   4.2  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    24   5.6  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   7.4  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   9.8  

>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -3

Query: 127 ILSNSLLKYVRYRTRNYQNNFKIIFVFG 44
           +L + LLK V   + +Y +NF I   FG
Sbjct: 281 VLPSQLLKSVPLSSNDYVDNFNIFTEFG 308


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -3

Query: 121 SNSLLKYVRYRTRNYQNNFKIIFVFGTVPLNPVHFK 14
           S SLL  V     ++++N + +   GT+P NP +F+
Sbjct: 397 SKSLLANVLDIDDDFRHNCRPLTPGGTLPHNPTYFR 432


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 230 RVAVSESGKGTRDLKKKRD*FNS 162
           RV + E  K   +LKKK+D + S
Sbjct: 445 RVQIDEHNKNFYELKKKKDHYQS 467


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -2

Query: 476  NLTYKYRLTSKYLAFLIWSSHY 411
            NLTY++   ++Y  F  W+  Y
Sbjct: 1565 NLTYQFFDYARYFTFPYWNEDY 1586


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 711,558
Number of Sequences: 2352
Number of extensions: 13525
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)