Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40177
(668 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC104663-1|AAI04664.1| 99|Homo sapiens ESF1 protein protein. 76 1e-13
BC062214-1|AAH62214.1| 110|Homo sapiens ESF1 protein protein. 76 1e-13
BC046107-1|AAH46107.1| 595|Homo sapiens ESF1 protein protein. 76 1e-13
BC039706-1|AAH39706.2| 294|Homo sapiens ESF1 protein protein. 76 1e-13
BC030513-1|AAH30513.1| 595|Homo sapiens ESF1 protein protein. 76 1e-13
AL161659-1|CAC07199.1| 851|Homo sapiens chromosome 20 open read... 76 1e-13
AK022369-1|BAB14023.1| 589|Homo sapiens protein ( Homo sapiens ... 76 1e-13
BC030645-1|AAH30645.1| 364|Homo sapiens platelet derived growth... 30 8.6
BC020952-1|AAH20952.1| 552|Homo sapiens Unknown (protein for IM... 30 8.6
AY359116-1|AAQ89474.1| 364|Homo sapiens SCDGF-B protein. 30 8.6
AY027518-1|AAK20082.1| 364|Homo sapiens iris-expressed growth f... 30 8.6
AY027517-1|AAK20081.1| 370|Homo sapiens iris-expressed growth f... 30 8.6
AF336376-1|AAK56136.1| 370|Homo sapiens platelet-derived growth... 30 8.6
AF335584-1|AAK38840.1| 370|Homo sapiens platelet-derived growth... 30 8.6
AB033832-1|BAB18903.1| 370|Homo sapiens spinal cord-derived gro... 30 8.6
>BC104663-1|AAI04664.1| 99|Homo sapiens ESF1 protein protein.
Length = 99
Score = 75.8 bits (178), Expect = 1e-13
Identities = 31/54 (57%), Positives = 42/54 (77%)
Frame = +1
Query: 97 ILQDSRFTKYLSDPRYRQIPKHERKVKIDKRFQPMFDDEKFKVKYTVDKRGRPL 258
I+ D RF + DPR+ ++P+ +RKVKIDKRF+ MF D+KFK+ Y VDKRGRP+
Sbjct: 7 IMSDQRFRRVAKDPRFWEMPEKDRKVKIDKRFRAMFHDKKFKLNYAVDKRGRPI 60
>BC062214-1|AAH62214.1| 110|Homo sapiens ESF1 protein protein.
Length = 110
Score = 75.8 bits (178), Expect = 1e-13
Identities = 31/54 (57%), Positives = 42/54 (77%)
Frame = +1
Query: 97 ILQDSRFTKYLSDPRYRQIPKHERKVKIDKRFQPMFDDEKFKVKYTVDKRGRPL 258
I+ D RF + DPR+ ++P+ +RKVKIDKRF+ MF D+KFK+ Y VDKRGRP+
Sbjct: 7 IMSDQRFRRVAKDPRFWEMPEKDRKVKIDKRFRAMFHDKKFKLNYAVDKRGRPI 60
>BC046107-1|AAH46107.1| 595|Homo sapiens ESF1 protein protein.
Length = 595
Score = 75.8 bits (178), Expect = 1e-13
Identities = 31/54 (57%), Positives = 42/54 (77%)
Frame = +1
Query: 97 ILQDSRFTKYLSDPRYRQIPKHERKVKIDKRFQPMFDDEKFKVKYTVDKRGRPL 258
I+ D RF + DPR+ ++P+ +RKVKIDKRF+ MF D+KFK+ Y VDKRGRP+
Sbjct: 7 IMSDQRFRRVAKDPRFWEMPEKDRKVKIDKRFRAMFHDKKFKLNYAVDKRGRPI 60
Score = 29.9 bits (64), Expect = 8.6
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 560 GMEHEWGELXXXXXXXXXXXRRIAICNM 643
G EH W EL RR+A+CNM
Sbjct: 328 GFEHAWRELDKDAPRADEITRRLAVCNM 355
>BC039706-1|AAH39706.2| 294|Homo sapiens ESF1 protein protein.
Length = 294
Score = 75.8 bits (178), Expect = 1e-13
Identities = 31/54 (57%), Positives = 42/54 (77%)
Frame = +1
Query: 97 ILQDSRFTKYLSDPRYRQIPKHERKVKIDKRFQPMFDDEKFKVKYTVDKRGRPL 258
I+ D RF + DPR+ ++P+ +RKVKIDKRF+ MF D+KFK+ Y VDKRGRP+
Sbjct: 7 IMSDQRFRRVAKDPRFWEMPEKDRKVKIDKRFRAMFHDKKFKLNYAVDKRGRPI 60
>BC030513-1|AAH30513.1| 595|Homo sapiens ESF1 protein protein.
Length = 595
Score = 75.8 bits (178), Expect = 1e-13
Identities = 31/54 (57%), Positives = 42/54 (77%)
Frame = +1
Query: 97 ILQDSRFTKYLSDPRYRQIPKHERKVKIDKRFQPMFDDEKFKVKYTVDKRGRPL 258
I+ D RF + DPR+ ++P+ +RKVKIDKRF+ MF D+KFK+ Y VDKRGRP+
Sbjct: 7 IMSDQRFRRVAKDPRFWEMPEKDRKVKIDKRFRAMFHDKKFKLNYAVDKRGRPI 60
Score = 29.9 bits (64), Expect = 8.6
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 560 GMEHEWGELXXXXXXXXXXXRRIAICNM 643
G EH W EL RR+A+CNM
Sbjct: 328 GFEHAWRELDKDAPRADEITRRLAVCNM 355
>AL161659-1|CAC07199.1| 851|Homo sapiens chromosome 20 open reading
frame 6 protein.
Length = 851
Score = 75.8 bits (178), Expect = 1e-13
Identities = 31/54 (57%), Positives = 42/54 (77%)
Frame = +1
Query: 97 ILQDSRFTKYLSDPRYRQIPKHERKVKIDKRFQPMFDDEKFKVKYTVDKRGRPL 258
I+ D RF + DPR+ ++P+ +RKVKIDKRF+ MF D+KFK+ Y VDKRGRP+
Sbjct: 7 IMSDQRFRRVAKDPRFWEMPEKDRKVKIDKRFRAMFHDKKFKLNYAVDKRGRPI 60
Score = 29.9 bits (64), Expect = 8.6
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 560 GMEHEWGELXXXXXXXXXXXRRIAICNM 643
G EH W EL RR+A+CNM
Sbjct: 328 GFEHAWRELDKDAPRADEITRRLAVCNM 355
>AK022369-1|BAB14023.1| 589|Homo sapiens protein ( Homo sapiens
cDNA FLJ12307 fis, clone MAMMA1001908. ).
Length = 589
Score = 75.8 bits (178), Expect = 1e-13
Identities = 31/54 (57%), Positives = 42/54 (77%)
Frame = +1
Query: 97 ILQDSRFTKYLSDPRYRQIPKHERKVKIDKRFQPMFDDEKFKVKYTVDKRGRPL 258
I+ D RF + DPR+ ++P+ +RKVKIDKRF+ MF D+KFK+ Y VDKRGRP+
Sbjct: 7 IMSDQRFRRVAKDPRFWEMPEKDRKVKIDKRFRAMFHDKKFKLNYAVDKRGRPI 60
Score = 29.9 bits (64), Expect = 8.6
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 560 GMEHEWGELXXXXXXXXXXXRRIAICNM 643
G EH W EL RR+A+CNM
Sbjct: 328 GFEHAWRELDKDAPRADEITRRLAVCNM 355
>BC030645-1|AAH30645.1| 364|Homo sapiens platelet derived growth
factor D protein.
Length = 364
Score = 29.9 bits (64), Expect = 8.6
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 61 FNRTKHLLKMSN--ILQDSRFTKYLSDPRYRQIPKHERKVKID 183
F+ + LLK N Q+ YL PRYR H+RK K+D
Sbjct: 211 FDTVEDLLKYFNPESWQEDLENMYLDTPRYRGRSYHDRKSKVD 253
>BC020952-1|AAH20952.1| 552|Homo sapiens Unknown (protein for
IMAGE:3850711) protein.
Length = 552
Score = 29.9 bits (64), Expect = 8.6
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 560 GMEHEWGELXXXXXXXXXXXRRIAICNM 643
G EH W EL RR+A+CNM
Sbjct: 237 GFEHAWRELDKDAPRADEITRRLAVCNM 264
>AY359116-1|AAQ89474.1| 364|Homo sapiens SCDGF-B protein.
Length = 364
Score = 29.9 bits (64), Expect = 8.6
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 61 FNRTKHLLKMSN--ILQDSRFTKYLSDPRYRQIPKHERKVKID 183
F+ + LLK N Q+ YL PRYR H+RK K+D
Sbjct: 211 FDTVEDLLKYFNPESWQEDLENMYLDTPRYRGRSYHDRKSKVD 253
>AY027518-1|AAK20082.1| 364|Homo sapiens iris-expressed growth
factor short form protein.
Length = 364
Score = 29.9 bits (64), Expect = 8.6
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 61 FNRTKHLLKMSN--ILQDSRFTKYLSDPRYRQIPKHERKVKID 183
F+ + LLK N Q+ YL PRYR H+RK K+D
Sbjct: 211 FDTVEDLLKYFNPESWQEDLENMYLDTPRYRGRSYHDRKSKVD 253
>AY027517-1|AAK20081.1| 370|Homo sapiens iris-expressed growth
factor long form protein.
Length = 370
Score = 29.9 bits (64), Expect = 8.6
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 61 FNRTKHLLKMSN--ILQDSRFTKYLSDPRYRQIPKHERKVKID 183
F+ + LLK N Q+ YL PRYR H+RK K+D
Sbjct: 217 FDTVEDLLKYFNPESWQEDLENMYLDTPRYRGRSYHDRKSKVD 259
>AF336376-1|AAK56136.1| 370|Homo sapiens platelet-derived growth
factor D protein.
Length = 370
Score = 29.9 bits (64), Expect = 8.6
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 61 FNRTKHLLKMSN--ILQDSRFTKYLSDPRYRQIPKHERKVKID 183
F+ + LLK N Q+ YL PRYR H+RK K+D
Sbjct: 217 FDTVEDLLKYFNPESWQEDLENMYLDTPRYRGRSYHDRKSKVD 259
>AF335584-1|AAK38840.1| 370|Homo sapiens platelet-derived growth
factor D protein.
Length = 370
Score = 29.9 bits (64), Expect = 8.6
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 61 FNRTKHLLKMSN--ILQDSRFTKYLSDPRYRQIPKHERKVKID 183
F+ + LLK N Q+ YL PRYR H+RK K+D
Sbjct: 217 FDTVEDLLKYFNPESWQEDLENMYLDTPRYRGRSYHDRKSKVD 259
>AB033832-1|BAB18903.1| 370|Homo sapiens spinal cord-derived growth
factor-B protein.
Length = 370
Score = 29.9 bits (64), Expect = 8.6
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 61 FNRTKHLLKMSN--ILQDSRFTKYLSDPRYRQIPKHERKVKID 183
F+ + LLK N Q+ YL PRYR H+RK K+D
Sbjct: 217 FDTVEDLLKYFNPESWQEDLENMYLDTPRYRGRSYHDRKSKVD 259
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,575,918
Number of Sequences: 237096
Number of extensions: 1438730
Number of successful extensions: 2475
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2468
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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