Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40177
         (668 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122162-1|AAM52674.1|  785|Drosophila melanogaster LD23562p pro...    86   4e-17
AL022018-7|CAA17684.1|  771|Drosophila melanogaster EG:8D8.4 pro...    86   4e-17
AE014298-186|AAF45610.1|  771|Drosophila melanogaster CG11417-PA...    86   4e-17

>AY122162-1|AAM52674.1|  785|Drosophila melanogaster LD23562p
           protein.
          Length = 785

 Score = 86.2 bits (204), Expect = 4e-17
 Identities = 39/56 (69%), Positives = 46/56 (82%)
 Frame = +1

Query: 91  SNILQDSRFTKYLSDPRYRQIPKHERKVKIDKRFQPMFDDEKFKVKYTVDKRGRPL 258
           + I QDSRF   L+DPR+R +PK +RKVKIDKRFQ MF D+KFKVKYTVDK GRP+
Sbjct: 53  NGIWQDSRFQHLLTDPRFRGVPKVQRKVKIDKRFQGMFTDDKFKVKYTVDKYGRPV 108



 Score = 30.3 bits (65), Expect = 2.5
 Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
 Frame = +3

Query: 378 DDESIDKIDPKTLNDKLTR--GKLDKKIKTRLLDLDIDYARGEG 503
           ++ +I  ++ +  ND L     ++ + ++ RL + +IDYARGEG
Sbjct: 154 EERAIANLEKEESNDTLESDSSEVSQSLRQRLTNPEIDYARGEG 197



 Score = 29.5 bits (63), Expect = 4.3
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 563 MEHEWGELXXXXXXXXXXXRRIAICNM 643
           ++H WGEL           RR+A+CNM
Sbjct: 220 IDHVWGELDNDAEHTEESTRRLAVCNM 246


>AL022018-7|CAA17684.1|  771|Drosophila melanogaster EG:8D8.4
           protein.
          Length = 771

 Score = 86.2 bits (204), Expect = 4e-17
 Identities = 39/56 (69%), Positives = 46/56 (82%)
 Frame = +1

Query: 91  SNILQDSRFTKYLSDPRYRQIPKHERKVKIDKRFQPMFDDEKFKVKYTVDKRGRPL 258
           + I QDSRF   L+DPR+R +PK +RKVKIDKRFQ MF D+KFKVKYTVDK GRP+
Sbjct: 39  NGIWQDSRFQHLLTDPRFRGVPKVQRKVKIDKRFQGMFTDDKFKVKYTVDKYGRPV 94



 Score = 30.3 bits (65), Expect = 2.5
 Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
 Frame = +3

Query: 378 DDESIDKIDPKTLNDKLTR--GKLDKKIKTRLLDLDIDYARGEG 503
           ++ +I  ++ +  ND L     ++ + ++ RL + +IDYARGEG
Sbjct: 140 EERAIANLEKEESNDTLESDSSEVSQSLRQRLTNPEIDYARGEG 183



 Score = 29.5 bits (63), Expect = 4.3
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 563 MEHEWGELXXXXXXXXXXXRRIAICNM 643
           ++H WGEL           RR+A+CNM
Sbjct: 206 IDHVWGELDNDAEHTEESTRRLAVCNM 232


>AE014298-186|AAF45610.1|  771|Drosophila melanogaster CG11417-PA
           protein.
          Length = 771

 Score = 86.2 bits (204), Expect = 4e-17
 Identities = 39/56 (69%), Positives = 46/56 (82%)
 Frame = +1

Query: 91  SNILQDSRFTKYLSDPRYRQIPKHERKVKIDKRFQPMFDDEKFKVKYTVDKRGRPL 258
           + I QDSRF   L+DPR+R +PK +RKVKIDKRFQ MF D+KFKVKYTVDK GRP+
Sbjct: 39  NGIWQDSRFQHLLTDPRFRGVPKVQRKVKIDKRFQGMFTDDKFKVKYTVDKYGRPV 94



 Score = 30.3 bits (65), Expect = 2.5
 Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
 Frame = +3

Query: 378 DDESIDKIDPKTLNDKLTR--GKLDKKIKTRLLDLDIDYARGEG 503
           ++ +I  ++ +  ND L     ++ + ++ RL + +IDYARGEG
Sbjct: 140 EERAIANLEKEESNDTLESDSSEVSQSLRQRLTNPEIDYARGEG 183



 Score = 29.5 bits (63), Expect = 4.3
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 563 MEHEWGELXXXXXXXXXXXRRIAICNM 643
           ++H WGEL           RR+A+CNM
Sbjct: 206 IDHVWGELDNDAEHTEESTRRLAVCNM 232


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,654,906
Number of Sequences: 53049
Number of extensions: 425089
Number of successful extensions: 1245
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1245
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)