Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40177
         (668 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73427-4|CAA97802.3|  601|Caenorhabditis elegans Hypothetical pr...    48   8e-06
Z48544-7|CAA88440.1|  249|Caenorhabditis elegans Hypothetical pr...    27   9.1  
AL132943-8|CAB81985.3|  453|Caenorhabditis elegans Hypothetical ...    27   9.1  
AL132943-7|CAC14394.1|  589|Caenorhabditis elegans Hypothetical ...    27   9.1  
AF031834-1|AAC13670.1|  589|Caenorhabditis elegans GLY4 protein.       27   9.1  

>Z73427-4|CAA97802.3|  601|Caenorhabditis elegans Hypothetical
           protein F58B3.4 protein.
          Length = 601

 Score = 47.6 bits (108), Expect = 8e-06
 Identities = 22/51 (43%), Positives = 30/51 (58%)
 Frame = +1

Query: 100 LQDSRFTKYLSDPRYRQIPKHERKVKIDKRFQPMFDDEKFKVKYTVDKRGR 252
           L D RF++  S+P +  +   E+KV IDKRF     DE+F  +  VD RGR
Sbjct: 13  LNDERFSQIKSNPMFVGLKNSEKKVVIDKRFAAALTDERFSTRAKVDMRGR 63


>Z48544-7|CAA88440.1|  249|Caenorhabditis elegans Hypothetical
           protein ZK945.7 protein.
          Length = 249

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
 Frame = +1

Query: 28  ICKGYKSNPFLFNRTKHLLKMSNILQDSRFTKYLSDPRYRQIPKHERKVKIDKRFQPMFD 207
           +C  Y + P   N + + +    I+  +      +D     IPK E  V   + FQP  D
Sbjct: 14  MCSVYSAQPSETNCSINEVLAKEIIAVNETPDDQADSSIYPIPKSETNVSASEGFQPCQD 73

Query: 208 DEKFKVK-YTVDKRGRPL 258
             +F +  Y+  K   P+
Sbjct: 74  INQFNLSVYSAPKSETPV 91


>AL132943-8|CAB81985.3|  453|Caenorhabditis elegans Hypothetical
           protein Y116F11B.12b protein.
          Length = 453

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 635 KWRFSELPLQ*FQHQHPTLPIHAP 564
           +W F    L+  +H HPT PI +P
Sbjct: 296 RWEFMNEQLRKERHAHPTAPIRSP 319


>AL132943-7|CAC14394.1|  589|Caenorhabditis elegans Hypothetical
           protein Y116F11B.12a protein.
          Length = 589

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 635 KWRFSELPLQ*FQHQHPTLPIHAP 564
           +W F    L+  +H HPT PI +P
Sbjct: 296 RWEFMNEQLRKERHAHPTAPIRSP 319


>AF031834-1|AAC13670.1|  589|Caenorhabditis elegans GLY4 protein.
          Length = 589

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 635 KWRFSELPLQ*FQHQHPTLPIHAP 564
           +W F    L+  +H HPT PI +P
Sbjct: 296 RWEFMNEQLRKERHAHPTAPIRSP 319


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,567,939
Number of Sequences: 27780
Number of extensions: 234926
Number of successful extensions: 643
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)