Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40176
         (736 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   3.0  
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    23   3.9  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   6.9  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +2

Query: 44  IGGSQTDDIISIQPLPIFIEKKNYLISLLPLI 139
           +GG Q  D+ S     +F+   N+ ++  P+I
Sbjct: 21  LGGPQLTDVCSASNGELFLALLNFFVATSPVI 52


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = -3

Query: 518 KKLSLQELKKTI*NL 474
           KK++++E KKTI NL
Sbjct: 25  KKMTIEEAKKTIKNL 39


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 9/29 (31%), Positives = 12/29 (41%)
 Frame = +1

Query: 67  YNIYTAITHIHREKKLFNFAAPFNTRYFP 153
           YN       + R K+  N+  P    YFP
Sbjct: 245 YNCERLCNRLGRVKRFINWHEPIPEAYFP 273


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,680
Number of Sequences: 438
Number of extensions: 2637
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)