Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40175
         (703 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P49010 Cluster: Chitooligosaccharidolytic beta-N-acetyl...    39   0.10 
UniRef50_A0NN08 Cluster: Putative uncharacterized protein; n=1; ...    34   3.9  
UniRef50_Q54RH1 Cluster: Putative uncharacterized protein; n=4; ...    33   6.8  
UniRef50_Q7R9J7 Cluster: Putative uncharacterized protein PY0686...    33   9.0  

>UniRef50_P49010 Cluster: Chitooligosaccharidolytic
           beta-N-acetylglucosaminidase precursor; n=9;
           Endopterygota|Rep: Chitooligosaccharidolytic
           beta-N-acetylglucosaminidase precursor - Bombyx mori
           (Silk moth)
          Length = 596

 Score = 39.1 bits (87), Expect = 0.10
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +1

Query: 1   PEWCYQNQGLCYG 39
           PEWCYQNQGLCYG
Sbjct: 584 PEWCYQNQGLCYG 596


>UniRef50_A0NN08 Cluster: Putative uncharacterized protein; n=1;
           Stappia aggregata IAM 12614|Rep: Putative
           uncharacterized protein - Stappia aggregata IAM 12614
          Length = 253

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = -1

Query: 178 KQSKGIPLYFGYLKKVAMSFMIVLSVFVIYYS*GWQHILFALSINSN 38
           KQ+K  P + GYL KV    +  L VF + +  G     FALS   N
Sbjct: 4   KQTKSAPFFVGYLNKVPKPLVAFLGVFSLCFVAGLGLAAFALSSTQN 50


>UniRef50_Q54RH1 Cluster: Putative uncharacterized protein; n=4;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 512

 Score = 33.1 bits (72), Expect = 6.8
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = -3

Query: 236 ISNCNFAQKTLLNIIFSCNKTKQRNSSLFWLFEKSCDEFYDSI 108
           +SN N A  T+LN+I   NKT   +S     FE SC+   D++
Sbjct: 27  VSNPN-ANPTILNLIVDSNKTNSYSSECGSSFEDSCNNIVDAV 68


>UniRef50_Q7R9J7 Cluster: Putative uncharacterized protein PY06865;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY06865 - Plasmodium yoelii
           yoelii
          Length = 706

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
 Frame = +2

Query: 86  IINNKDRQYYHKTHRNFFQITKIKRNSFALFCYMKKLCLTR-FFGRNYNLK*KVSTYLPA 262
           IIN+ D  + HK +  F +  +I      LF ++ KL ++  +   N+N K   + YL  
Sbjct: 162 IINHSDYIFSHKPYFTFSRKIEINNKKNILFLFLNKLKISNLYISSNFNNKNNDTDYLRG 221

Query: 263 *KNI-SEIIMLENKNKMY 313
             NI  +   L+N ++ Y
Sbjct: 222 LCNILDKYSKLQNVSQFY 239


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 546,675,025
Number of Sequences: 1657284
Number of extensions: 9001197
Number of successful extensions: 19977
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19971
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55785129165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)