Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40175
         (703 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z30423-5|CAA83008.1|   60|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z81531-6|CAB04317.2|  330|Caenorhabditis elegans Hypothetical pr...    29   4.3  
U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical pr...    27   9.8  
U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical pr...    27   9.8  
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr...    27   9.8  

>Z30423-5|CAA83008.1|   60|Caenorhabditis elegans Hypothetical
           protein T20G5.7 protein.
          Length = 60

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/20 (55%), Positives = 17/20 (85%)
 Frame = -1

Query: 142 LKKVAMSFMIVLSVFVIYYS 83
           LK VA+ F++++SVFV+Y S
Sbjct: 4   LKTVALYFLVIMSVFVVYTS 23


>Z81531-6|CAB04317.2|  330|Caenorhabditis elegans Hypothetical
           protein F36D3.6 protein.
          Length = 330

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 14/47 (29%), Positives = 27/47 (57%)
 Frame = -3

Query: 182 NKTKQRNSSLFWLFEKSCDEFYDSIVCLCYLLFIRLAAHPLRVVYKL 42
           N +K + S L   F     +FY +I+C+ ++++  +A +PL V+  L
Sbjct: 44  NMSKVKFSMLVMHFTIFWIDFYWNILCIPFVIYAAVAGYPLGVIVYL 90


>U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical protein
            C37C3.6c protein.
          Length = 1487

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = -2

Query: 483  KYSYYYANNGSTWCILMLYGNRTSRGNR 400
            K+SYYY N  S  C    YG      NR
Sbjct: 1445 KHSYYYYNTASHQCETFTYGGCLGNTNR 1472


>U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical protein
            C37C3.6a protein.
          Length = 1558

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = -2

Query: 483  KYSYYYANNGSTWCILMLYGNRTSRGNR 400
            K+SYYY N  S  C    YG      NR
Sbjct: 1516 KHSYYYYNTASHQCETFTYGGCLGNTNR 1543


>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical protein
            C37C3.6b protein.
          Length = 2167

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = -2

Query: 483  KYSYYYANNGSTWCILMLYGNRTSRGNR 400
            K+SYYY N  S  C    YG      NR
Sbjct: 1516 KHSYYYYNTASHQCETFTYGGCLGNTNR 1543


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,313,930
Number of Sequences: 27780
Number of extensions: 239471
Number of successful extensions: 534
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 534
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)