Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40174
         (740 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   3.4  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    21   7.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.9  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.9  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   7.9  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -1

Query: 548 QQQYRPCLCCLMADLLGSRR*LYSC 474
           +QQY    C LM+ LLG+ + +Y+C
Sbjct: 89  RQQY----CQLMSKLLGNHQLVYNC 109


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 234 IHTSSRQEGALHCSRR 281
           +HT  R  G  HCS +
Sbjct: 59  VHTGERPYGCEHCSMK 74


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = +2

Query: 428  WKLRHCDWTQS 460
            W   HCDW ++
Sbjct: 2271 WNKDHCDWPEN 2281


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 508 TFLAPDGSFTLVR 470
           T   PDG FT++R
Sbjct: 579 TVTVPDGGFTIIR 591


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 234 IHTSSRQEGALHCSRR 281
           +HT  R  G  HCS +
Sbjct: 212 VHTGERPYGCEHCSMK 227


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,967
Number of Sequences: 336
Number of extensions: 4255
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)