Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40174
         (740 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...   163   7e-42
AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         27   0.46 
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    25   3.2  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   3.2  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   3.2  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    24   5.7  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   9.9  

>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score =  163 bits (395), Expect = 7e-42
 Identities = 78/132 (59%), Positives = 92/132 (69%)
 Frame = +3

Query: 282 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGXRGRLARASGNFATVIGHNP 461
           +YTGQFVYCG++A L++GNV+P+G MPEGTIVCNLEEK G RG+LAR SGN+A+VI HNP
Sbjct: 82  MYTGQFVYCGRRAQLQIGNVIPIGLMPEGTIVCNLEEKTGDRGKLARTSGNYASVIAHNP 141

Query: 462 DAKRTRVKLPSGAKKVCHQATEAWSVLLLEVDVLTNLF*KLEGHTTSTRSNVTAGPYVRG 641
           D KRTRVKLPSGAKKV   A  A   ++     +     K        +      P VRG
Sbjct: 142 DTKRTRVKLPSGAKKVLPSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPKVRG 201

Query: 642 VAMNPVEHPHGG 677
           VAMNPVEHPHGG
Sbjct: 202 VAMNPVEHPHGG 213



 Score =  130 bits (314), Expect = 4e-32
 Identities = 59/83 (71%), Positives = 69/83 (83%)
 Frame = +2

Query: 41  MGRVIRAQRKGAGSVFVSHTKKRXGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 220
           MGRVIRAQRKGAGSVF +HTKKR G PKLR LDYAERHGY+KGVVK II DPGRGAPLAV
Sbjct: 1   MGRVIRAQRKGAGSVFRAHTKKRKGQPKLRHLDYAERHGYLKGVVKQIIQDPGRGAPLAV 60

Query: 221 VHFRDPYKFKTRRSSSLLPKALH 289
           V+FRDPY+F+  +   +  + ++
Sbjct: 61  VNFRDPYRFRLSKQLFIAAEGMY 83



 Score = 36.7 bits (81), Expect = 8e-04
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = +1

Query: 676 GGNHQHIGKASTVKR 720
           GGNHQHIGKASTVKR
Sbjct: 213 GGNHQHIGKASTVKR 227


>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 27.5 bits (58), Expect = 0.46
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +2

Query: 515 SSNRGMVGIVAGGGRIDKPILKAGRAYHK 601
           S+ +  +G V GG   D  IL  GRAYH+
Sbjct: 81  SAGQVPLGAVVGGHTSDGEILYVGRAYHE 109


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = +1

Query: 517 KQQRHGRYCCWRWTY 561
           +QQ+HG++CC R ++
Sbjct: 280 QQQQHGQHCCCRGSH 294


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 149 RHGYIKGVVKDIIHDP 196
           R+  +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 149 RHGYIKGVVKDIIHDP 196
           R+  +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 3/24 (12%)
 Frame = -3

Query: 567 LSIRPPPATIPTM---PLLLDGRP 505
           + +RPPP  +PTM   P+ L  RP
Sbjct: 114 MGMRPPPMMVPTMGMPPMGLGMRP 137


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +3

Query: 441 TVIGHNPDAKRTRVKLPSGAKKVCHQATEAWSVLLLEV 554
           +V G NPDAKR    L S   K+          L +++
Sbjct: 16  SVCGGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKI 53


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 852,672
Number of Sequences: 2352
Number of extensions: 19015
Number of successful extensions: 74
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)