Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40174
(740 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 177 5e-44
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 177 5e-44
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 177 5e-44
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 177 5e-44
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 177 5e-44
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 177 5e-44
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 177 5e-44
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 177 5e-44
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 155 1e-37
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 118 2e-26
BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal... 33 0.81
BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal... 33 0.81
AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA seq... 33 0.81
AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein. 33 0.81
Y09160-1|CAA70356.1| 869|Homo sapiens sub1.5 protein. 31 3.3
U64105-1|AAB17896.1| 912|Homo sapiens guanine nucleotide exchan... 31 3.3
BT007421-1|AAP36089.1| 853|Homo sapiens Rho guanine nucleotide ... 31 3.3
BC034013-1|AAH34013.2| 927|Homo sapiens Rho guanine nucleotide ... 31 3.3
BC005155-1|AAH05155.2| 861|Homo sapiens ARHGEF1 protein protein. 31 3.3
AK124779-1|BAC85944.1| 163|Homo sapiens protein ( Homo sapiens ... 31 3.3
AK090448-1|BAC03429.1| 700|Homo sapiens FLJ00369 protein protein. 31 3.3
BC034696-1|AAH34696.1| 294|Homo sapiens syntaxin 19 protein. 30 7.6
AF461456-1|AAQ04780.1| 294|Homo sapiens syntaxin 19 protein. 30 7.6
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 177 bits (430), Expect = 5e-44
Identities = 100/200 (50%), Positives = 126/200 (63%), Gaps = 5/200 (2%)
Frame = +2
Query: 41 MGRVIRAQRKGAGSVFVSHTKKRXGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 220
MGRVIR QRKGAGSVF +H K R GA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 221 VHFRDPYKFKTRRSSSLLPKALHR-PICLLWKESNS*SWKCDACWSYA*G--YHCV-QS* 388
V FRDPY+FK R + + +H K++ + G C+ +
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 389 RENG-X*RSSGTCLWKLRHCDWTQS*C*AYKSKATVWSQEGLPSSNRGMVGIVAGGGRID 565
+ G R+SG + H T+ + K S++ + S+NR +VG+VAGGGRID
Sbjct: 121 GDRGKLARASGNYATVISHNPETKK----TRVKLPSGSKKVISSANRAVVGVVAGGGRID 176
Query: 566 KPILKAGRAYHKYKVKRNCW 625
KPILKAGRAYHKYK KRNCW
Sbjct: 177 KPILKAGRAYHKYKAKRNCW 196
Score = 155 bits (377), Expect = 1e-37
Identities = 77/132 (58%), Positives = 91/132 (68%)
Frame = +3
Query: 282 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGXRGRLARASGNFATVIGHNP 461
++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK G RG+LARASGN+ATVI HNP
Sbjct: 82 IHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNP 141
Query: 462 DAKRTRVKLPSGAKKVCHQATEAWSVLLLEVDVLTNLF*KLEGHTTSTRSNVTAGPYVRG 641
+ K+TRVKLPSG+KKV A A ++ + K ++ P VRG
Sbjct: 142 ETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRG 201
Query: 642 VAMNPVEHPHGG 677
VAMNPVEHP GG
Sbjct: 202 VAMNPVEHPFGG 213
Score = 33.1 bits (72), Expect = 1.1
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1
Query: 676 GGNHQHIGKASTVKR 720
GGNHQHIGK ST++R
Sbjct: 213 GGNHQHIGKPSTIRR 227
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 177 bits (430), Expect = 5e-44
Identities = 100/200 (50%), Positives = 126/200 (63%), Gaps = 5/200 (2%)
Frame = +2
Query: 41 MGRVIRAQRKGAGSVFVSHTKKRXGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 220
MGRVIR QRKGAGSVF +H K R GA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 221 VHFRDPYKFKTRRSSSLLPKALHR-PICLLWKESNS*SWKCDACWSYA*G--YHCV-QS* 388
V FRDPY+FK R + + +H K++ + G C+ +
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 389 RENG-X*RSSGTCLWKLRHCDWTQS*C*AYKSKATVWSQEGLPSSNRGMVGIVAGGGRID 565
+ G R+SG + H T+ + K S++ + S+NR +VG+VAGGGRID
Sbjct: 121 GDRGKLARASGNYATVISHNPETKK----TRVKLPSGSKKVISSANRAVVGVVAGGGRID 176
Query: 566 KPILKAGRAYHKYKVKRNCW 625
KPILKAGRAYHKYK KRNCW
Sbjct: 177 KPILKAGRAYHKYKAKRNCW 196
Score = 155 bits (377), Expect = 1e-37
Identities = 77/132 (58%), Positives = 91/132 (68%)
Frame = +3
Query: 282 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGXRGRLARASGNFATVIGHNP 461
++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK G RG+LARASGN+ATVI HNP
Sbjct: 82 IHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNP 141
Query: 462 DAKRTRVKLPSGAKKVCHQATEAWSVLLLEVDVLTNLF*KLEGHTTSTRSNVTAGPYVRG 641
+ K+TRVKLPSG+KKV A A ++ + K ++ P VRG
Sbjct: 142 ETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRG 201
Query: 642 VAMNPVEHPHGG 677
VAMNPVEHP GG
Sbjct: 202 VAMNPVEHPFGG 213
Score = 33.1 bits (72), Expect = 1.1
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1
Query: 676 GGNHQHIGKASTVKR 720
GGNHQHIGK ST++R
Sbjct: 213 GGNHQHIGKPSTIRR 227
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 177 bits (430), Expect = 5e-44
Identities = 100/200 (50%), Positives = 126/200 (63%), Gaps = 5/200 (2%)
Frame = +2
Query: 41 MGRVIRAQRKGAGSVFVSHTKKRXGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 220
MGRVIR QRKGAGSVF +H K R GA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 221 VHFRDPYKFKTRRSSSLLPKALHR-PICLLWKESNS*SWKCDACWSYA*G--YHCV-QS* 388
V FRDPY+FK R + + +H K++ + G C+ +
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKP 120
Query: 389 RENG-X*RSSGTCLWKLRHCDWTQS*C*AYKSKATVWSQEGLPSSNRGMVGIVAGGGRID 565
+ G R+SG + H T+ + K S++ + S+NR +VG+VAGGGRID
Sbjct: 121 GDRGKLARASGNYATVISHNPETKK----TRVKLPSGSKKVISSANRAVVGVVAGGGRID 176
Query: 566 KPILKAGRAYHKYKVKRNCW 625
KPILKAGRAYHKYK KRNCW
Sbjct: 177 KPILKAGRAYHKYKAKRNCW 196
Score = 156 bits (378), Expect = 9e-38
Identities = 78/132 (59%), Positives = 91/132 (68%)
Frame = +3
Query: 282 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGXRGRLARASGNFATVIGHNP 461
++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK G RG+LARASGN+ATVI HNP
Sbjct: 82 IHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNP 141
Query: 462 DAKRTRVKLPSGAKKVCHQATEAWSVLLLEVDVLTNLF*KLEGHTTSTRSNVTAGPYVRG 641
+ K+TRVKLPSG+KKV A A ++ + K ++ P VRG
Sbjct: 142 ETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRG 201
Query: 642 VAMNPVEHPHGG 677
VAMNPVEHP GG
Sbjct: 202 VAMNPVEHPFGG 213
Score = 33.1 bits (72), Expect = 1.1
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1
Query: 676 GGNHQHIGKASTVKR 720
GGNHQHIGK ST++R
Sbjct: 213 GGNHQHIGKPSTIRR 227
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 177 bits (430), Expect = 5e-44
Identities = 100/200 (50%), Positives = 126/200 (63%), Gaps = 5/200 (2%)
Frame = +2
Query: 41 MGRVIRAQRKGAGSVFVSHTKKRXGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 220
MGRVIR QRKGAGSVF +H K R GA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 221 VHFRDPYKFKTRRSSSLLPKALHR-PICLLWKESNS*SWKCDACWSYA*G--YHCV-QS* 388
V FRDPY+FK R + + +H K++ + G C+ +
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 389 RENG-X*RSSGTCLWKLRHCDWTQS*C*AYKSKATVWSQEGLPSSNRGMVGIVAGGGRID 565
+ G R+SG + H T+ + K S++ + S+NR +VG+VAGGGRID
Sbjct: 121 GDRGKLARASGNYATVISHNPETKK----TRVKLPSGSKKVISSANRAVVGVVAGGGRID 176
Query: 566 KPILKAGRAYHKYKVKRNCW 625
KPILKAGRAYHKYK KRNCW
Sbjct: 177 KPILKAGRAYHKYKAKRNCW 196
Score = 155 bits (377), Expect = 1e-37
Identities = 77/132 (58%), Positives = 91/132 (68%)
Frame = +3
Query: 282 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGXRGRLARASGNFATVIGHNP 461
++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK G RG+LARASGN+ATVI HNP
Sbjct: 82 IHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNP 141
Query: 462 DAKRTRVKLPSGAKKVCHQATEAWSVLLLEVDVLTNLF*KLEGHTTSTRSNVTAGPYVRG 641
+ K+TRVKLPSG+KKV A A ++ + K ++ P VRG
Sbjct: 142 ETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRG 201
Query: 642 VAMNPVEHPHGG 677
VAMNPVEHP GG
Sbjct: 202 VAMNPVEHPFGG 213
Score = 33.1 bits (72), Expect = 1.1
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1
Query: 676 GGNHQHIGKASTVKR 720
GGNHQHIGK ST++R
Sbjct: 213 GGNHQHIGKPSTIRR 227
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 177 bits (430), Expect = 5e-44
Identities = 100/200 (50%), Positives = 126/200 (63%), Gaps = 5/200 (2%)
Frame = +2
Query: 41 MGRVIRAQRKGAGSVFVSHTKKRXGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 220
MGRVIR QRKGAGSVF +H K R GA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 221 VHFRDPYKFKTRRSSSLLPKALHR-PICLLWKESNS*SWKCDACWSYA*G--YHCV-QS* 388
V FRDPY+FK R + + +H K++ + G C+ +
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKP 120
Query: 389 RENG-X*RSSGTCLWKLRHCDWTQS*C*AYKSKATVWSQEGLPSSNRGMVGIVAGGGRID 565
+ G R+SG + H T+ + K S++ + S+NR +VG+VAGGGRID
Sbjct: 121 GDRGKLARASGNYATVISHNPETKK----TRVKLPSGSKKVISSANRAVVGVVAGGGRID 176
Query: 566 KPILKAGRAYHKYKVKRNCW 625
KPILKAGRAYHKYK KRNCW
Sbjct: 177 KPILKAGRAYHKYKAKRNCW 196
Score = 156 bits (378), Expect = 9e-38
Identities = 78/132 (59%), Positives = 91/132 (68%)
Frame = +3
Query: 282 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGXRGRLARASGNFATVIGHNP 461
++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK G RG+LARASGN+ATVI HNP
Sbjct: 82 IHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNP 141
Query: 462 DAKRTRVKLPSGAKKVCHQATEAWSVLLLEVDVLTNLF*KLEGHTTSTRSNVTAGPYVRG 641
+ K+TRVKLPSG+KKV A A ++ + K ++ P VRG
Sbjct: 142 ETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRG 201
Query: 642 VAMNPVEHPHGG 677
VAMNPVEHP GG
Sbjct: 202 VAMNPVEHPFGG 213
Score = 33.1 bits (72), Expect = 1.1
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1
Query: 676 GGNHQHIGKASTVKR 720
GGNHQHIGK ST++R
Sbjct: 213 GGNHQHIGKPSTIRR 227
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 177 bits (430), Expect = 5e-44
Identities = 100/200 (50%), Positives = 126/200 (63%), Gaps = 5/200 (2%)
Frame = +2
Query: 41 MGRVIRAQRKGAGSVFVSHTKKRXGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 220
MGRVIR QRKGAGSVF +H K R GA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 221 VHFRDPYKFKTRRSSSLLPKALHR-PICLLWKESNS*SWKCDACWSYA*G--YHCV-QS* 388
V FRDPY+FK R + + +H K++ + G C+ +
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKP 120
Query: 389 RENG-X*RSSGTCLWKLRHCDWTQS*C*AYKSKATVWSQEGLPSSNRGMVGIVAGGGRID 565
+ G R+SG + H T+ + K S++ + S+NR +VG+VAGGGRID
Sbjct: 121 GDRGKLARASGNYATVISHNPETKK----TRVKLPSGSKKVISSANRAVVGVVAGGGRID 176
Query: 566 KPILKAGRAYHKYKVKRNCW 625
KPILKAGRAYHKYK KRNCW
Sbjct: 177 KPILKAGRAYHKYKAKRNCW 196
Score = 156 bits (378), Expect = 9e-38
Identities = 78/132 (59%), Positives = 91/132 (68%)
Frame = +3
Query: 282 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGXRGRLARASGNFATVIGHNP 461
++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK G RG+LARASGN+ATVI HNP
Sbjct: 82 IHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNP 141
Query: 462 DAKRTRVKLPSGAKKVCHQATEAWSVLLLEVDVLTNLF*KLEGHTTSTRSNVTAGPYVRG 641
+ K+TRVKLPSG+KKV A A ++ + K ++ P VRG
Sbjct: 142 ETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRG 201
Query: 642 VAMNPVEHPHGG 677
VAMNPVEHP GG
Sbjct: 202 VAMNPVEHPFGG 213
Score = 33.1 bits (72), Expect = 1.1
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1
Query: 676 GGNHQHIGKASTVKR 720
GGNHQHIGK ST++R
Sbjct: 213 GGNHQHIGKPSTIRR 227
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 177 bits (430), Expect = 5e-44
Identities = 100/200 (50%), Positives = 126/200 (63%), Gaps = 5/200 (2%)
Frame = +2
Query: 41 MGRVIRAQRKGAGSVFVSHTKKRXGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 220
MGRVIR QRKGAGSVF +H K R GA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 221 VHFRDPYKFKTRRSSSLLPKALHR-PICLLWKESNS*SWKCDACWSYA*G--YHCV-QS* 388
V FRDPY+FK R + + +H K++ + G C+ +
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 389 RENG-X*RSSGTCLWKLRHCDWTQS*C*AYKSKATVWSQEGLPSSNRGMVGIVAGGGRID 565
+ G R+SG + H T+ + K S++ + S+NR +VG+VAGGGRID
Sbjct: 121 GDRGKLARASGNYATVISHNPETKK----TRVKLPSGSKKVISSANRAVVGVVAGGGRID 176
Query: 566 KPILKAGRAYHKYKVKRNCW 625
KPILKAGRAYHKYK KRNCW
Sbjct: 177 KPILKAGRAYHKYKAKRNCW 196
Score = 155 bits (377), Expect = 1e-37
Identities = 77/132 (58%), Positives = 91/132 (68%)
Frame = +3
Query: 282 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGXRGRLARASGNFATVIGHNP 461
++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK G RG+LARASGN+ATVI HNP
Sbjct: 82 IHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNP 141
Query: 462 DAKRTRVKLPSGAKKVCHQATEAWSVLLLEVDVLTNLF*KLEGHTTSTRSNVTAGPYVRG 641
+ K+TRVKLPSG+KKV A A ++ + K ++ P VRG
Sbjct: 142 ETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRG 201
Query: 642 VAMNPVEHPHGG 677
VAMNPVEHP GG
Sbjct: 202 VAMNPVEHPFGG 213
Score = 33.1 bits (72), Expect = 1.1
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1
Query: 676 GGNHQHIGKASTVKR 720
GGNHQHIGK ST++R
Sbjct: 213 GGNHQHIGKPSTIRR 227
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 177 bits (430), Expect = 5e-44
Identities = 100/200 (50%), Positives = 126/200 (63%), Gaps = 5/200 (2%)
Frame = +2
Query: 41 MGRVIRAQRKGAGSVFVSHTKKRXGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 220
MGRVIR QRKGAGSVF +H K R GA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 221 VHFRDPYKFKTRRSSSLLPKALHR-PICLLWKESNS*SWKCDACWSYA*G--YHCV-QS* 388
V FRDPY+FK R + + +H K++ + G C+ +
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 389 RENG-X*RSSGTCLWKLRHCDWTQS*C*AYKSKATVWSQEGLPSSNRGMVGIVAGGGRID 565
+ G R+SG + H T+ + K S++ + S+NR +VG+VAGGGRID
Sbjct: 121 GDRGKLARASGNYATVISHNPETKK----TRVKLPSGSKKVISSANRAVVGVVAGGGRID 176
Query: 566 KPILKAGRAYHKYKVKRNCW 625
KPILKAGRAYHKYK KRNCW
Sbjct: 177 KPILKAGRAYHKYKAKRNCW 196
Score = 155 bits (377), Expect = 1e-37
Identities = 77/132 (58%), Positives = 91/132 (68%)
Frame = +3
Query: 282 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGXRGRLARASGNFATVIGHNP 461
++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK G RG+LARASGN+ATVI HNP
Sbjct: 82 IHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNP 141
Query: 462 DAKRTRVKLPSGAKKVCHQATEAWSVLLLEVDVLTNLF*KLEGHTTSTRSNVTAGPYVRG 641
+ K+TRVKLPSG+KKV A A ++ + K ++ P VRG
Sbjct: 142 ETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRG 201
Query: 642 VAMNPVEHPHGG 677
VAMNPVEHP GG
Sbjct: 202 VAMNPVEHPFGG 213
Score = 33.1 bits (72), Expect = 1.1
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1
Query: 676 GGNHQHIGKASTVKR 720
GGNHQHIGK ST++R
Sbjct: 213 GGNHQHIGKPSTIRR 227
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 155 bits (377), Expect = 1e-37
Identities = 77/132 (58%), Positives = 91/132 (68%)
Frame = +3
Query: 282 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGXRGRLARASGNFATVIGHNP 461
++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK G RG+LARASGN+ATVI HNP
Sbjct: 36 IHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNP 95
Query: 462 DAKRTRVKLPSGAKKVCHQATEAWSVLLLEVDVLTNLF*KLEGHTTSTRSNVTAGPYVRG 641
+ K+TRVKLPSG+KKV A A ++ + K ++ P VRG
Sbjct: 96 ETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRG 155
Query: 642 VAMNPVEHPHGG 677
VAMNPVEHP GG
Sbjct: 156 VAMNPVEHPFGG 167
Score = 104 bits (249), Expect = 4e-22
Identities = 66/154 (42%), Positives = 86/154 (55%), Gaps = 5/154 (3%)
Frame = +2
Query: 179 DIIHDPGRGAPLAVVHFRDPYKFKTRRSSSLLPKALHR-PICLLWKESNS*SWKCDACWS 355
DIIHDPGRGAPLA V FRDPY+FK R + + +H K++ +
Sbjct: 1 DIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGT 60
Query: 356 YA*G--YHCV-QS*RENG-X*RSSGTCLWKLRHCDWTQS*C*AYKSKATVWSQEGLPSSN 523
G C+ + + G R+SG + H T+ + K S++ + S+N
Sbjct: 61 MPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKK----TRVKLPSGSKKVISSAN 116
Query: 524 RGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCW 625
R +VG+VAGGGRIDKPILKAGRAYHKYK KRNCW
Sbjct: 117 RAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCW 150
Score = 33.1 bits (72), Expect = 1.1
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1
Query: 676 GGNHQHIGKASTVKR 720
GGNHQHIGK ST++R
Sbjct: 167 GGNHQHIGKPSTIRR 181
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 118 bits (285), Expect = 2e-26
Identities = 53/79 (67%), Positives = 63/79 (79%)
Frame = +2
Query: 53 IRAQRKGAGSVFVSHTKKRXGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 232
IR QRKGAGSVF +H K R GA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FR
Sbjct: 1 IRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFR 60
Query: 233 DPYKFKTRRSSSLLPKALH 289
DPY+FK R + + +H
Sbjct: 61 DPYRFKKRTELFIAAEGIH 79
Score = 94.3 bits (224), Expect = 4e-19
Identities = 41/53 (77%), Positives = 47/53 (88%)
Frame = +3
Query: 282 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGXRGRLARASGNFA 440
++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK G RG+LARASGN+A
Sbjct: 78 IHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYA 130
>BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 33.5 bits (73), Expect = 0.81
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +3
Query: 333 GNVMPVGAMPEGTIVCNLEEKMGXRGRLARASGNFATVI 449
G+ P+GA+P GT++ N+E + G + RA+G ++
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 217
>BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 33.5 bits (73), Expect = 0.81
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +3
Query: 333 GNVMPVGAMPEGTIVCNLEEKMGXRGRLARASGNFATVI 449
G+ P+GA+P GT++ N+E + G + RA+G ++
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 217
>AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA
sequence from clone RP11-387M24 on chromosome 6 Contains
the 5' end of a gene for a novel protein (KIAA0076
KIAA0708), the ).
Length = 302
Score = 33.5 bits (73), Expect = 0.81
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +3
Query: 333 GNVMPVGAMPEGTIVCNLEEKMGXRGRLARASGNFATVI 449
G+ P+GA+P GT++ N+E + G + RA+G ++
Sbjct: 176 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 214
>AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein.
Length = 353
Score = 33.5 bits (73), Expect = 0.81
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +3
Query: 333 GNVMPVGAMPEGTIVCNLEEKMGXRGRLARASGNFATVI 449
G+ P+GA+P GT++ N+E + G + RA+G ++
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 217
>Y09160-1|CAA70356.1| 869|Homo sapiens sub1.5 protein.
Length = 869
Score = 31.5 bits (68), Expect = 3.3
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = -1
Query: 563 QYVHLQQQYRPCLCCLMADLLGS 495
Q+V LQ + P LCCL AD+LGS
Sbjct: 5 QHVALQFEPGPLLCCLHADMLGS 27
>U64105-1|AAB17896.1| 912|Homo sapiens guanine nucleotide exchange
factor p115-RhoGEF protein.
Length = 912
Score = 31.5 bits (68), Expect = 3.3
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = -1
Query: 563 QYVHLQQQYRPCLCCLMADLLGS 495
Q+V LQ + P LCCL AD+LGS
Sbjct: 64 QHVALQFEPGPLLCCLHADMLGS 86
>BT007421-1|AAP36089.1| 853|Homo sapiens Rho guanine nucleotide
exchange factor (GEF) 1 protein.
Length = 853
Score = 31.5 bits (68), Expect = 3.3
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = -1
Query: 563 QYVHLQQQYRPCLCCLMADLLGS 495
Q+V LQ + P LCCL AD+LGS
Sbjct: 5 QHVALQFEPGPLLCCLHADMLGS 27
>BC034013-1|AAH34013.2| 927|Homo sapiens Rho guanine nucleotide
exchange factor (GEF) 1 protein.
Length = 927
Score = 31.5 bits (68), Expect = 3.3
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = -1
Query: 563 QYVHLQQQYRPCLCCLMADLLGS 495
Q+V LQ + P LCCL AD+LGS
Sbjct: 79 QHVALQFEPGPLLCCLHADMLGS 101
>BC005155-1|AAH05155.2| 861|Homo sapiens ARHGEF1 protein protein.
Length = 861
Score = 31.5 bits (68), Expect = 3.3
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = -1
Query: 563 QYVHLQQQYRPCLCCLMADLLGS 495
Q+V LQ + P LCCL AD+LGS
Sbjct: 13 QHVALQFEPGPLLCCLHADMLGS 35
>AK124779-1|BAC85944.1| 163|Homo sapiens protein ( Homo sapiens
cDNA FLJ42789 fis, clone BRAWH3007221. ).
Length = 163
Score = 31.5 bits (68), Expect = 3.3
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -3
Query: 618 LRLTLYLWYAL-PAFKIGLSIRPPPATIPTMPLLLDGRPSW 499
L LT +L+ A P F++ +S+ PPP ++P P+ + P W
Sbjct: 87 LFLTHFLYLAASPCFRLSVSLFPPPLSLPRSPISVS--PPW 125
>AK090448-1|BAC03429.1| 700|Homo sapiens FLJ00369 protein protein.
Length = 700
Score = 31.5 bits (68), Expect = 3.3
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = -1
Query: 563 QYVHLQQQYRPCLCCLMADLLGS 495
Q+V LQ + P LCCL AD+LGS
Sbjct: 124 QHVALQFEPGPLLCCLHADMLGS 146
>BC034696-1|AAH34696.1| 294|Homo sapiens syntaxin 19 protein.
Length = 294
Score = 30.3 bits (65), Expect = 7.6
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 599 KYKVKRNCWAICTWCCHEPCRAS 667
KYK + C +C WCC PC +S
Sbjct: 273 KYKKRNPCRVLCCWCC--PCCSS 293
>AF461456-1|AAQ04780.1| 294|Homo sapiens syntaxin 19 protein.
Length = 294
Score = 30.3 bits (65), Expect = 7.6
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 599 KYKVKRNCWAICTWCCHEPCRAS 667
KYK + C +C WCC PC +S
Sbjct: 273 KYKKRNPCRVLCCWCC--PCCSS 293
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,820,950
Number of Sequences: 237096
Number of extensions: 2778913
Number of successful extensions: 5786
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 5469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5768
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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