Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40172
         (788 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    25   0.69 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.8  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   4.9  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.5  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    21   8.5  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    21   8.5  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 25.0 bits (52), Expect = 0.69
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -3

Query: 594 QRVCVKIQCSSVAFSYMQ*HIFCLKAFNH 508
           Q   VK    SV   ++Q  IFCL  FNH
Sbjct: 2   QHEVVKKFLHSVRIVFVQSEIFCLVNFNH 30


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -2

Query: 124 TNRNLDKQHFQTMYQLQNLINWRSS 50
           T+     QH+  +   + +I+WRSS
Sbjct: 495 TSHMQQTQHYTNIISQEQIISWRSS 519


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 392 LPKHIQQYVLFHL 354
           LPKH+ QY+L  L
Sbjct: 95  LPKHVDQYLLEQL 107


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -3

Query: 786 GGKLLITIINTGDINCLIQI*FLNYLSHAVS 694
           G +    +IN G +NC I++   N+    +S
Sbjct: 277 GYRYRFRVINAGFLNCPIEVSIDNHTLSVIS 307


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -1

Query: 428 DHDDYPHRPLPFLPKHIQQYVLFHLQLH 345
           D D+ P  P  +  +H+ Q++    Q H
Sbjct: 28  DEDNLPKDPRQWTREHVAQWINLVTQQH 55


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -1

Query: 428 DHDDYPHRPLPFLPKHIQQYVLFHLQLH 345
           D D+ P  P  +  +H+ Q++    Q H
Sbjct: 28  DEDNLPKDPRQWTREHVAQWINLVTQQH 55


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,438
Number of Sequences: 336
Number of extensions: 3525
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)