Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40172
(788 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF047659-11|AAC04428.1| 182|Caenorhabditis elegans Hypothetical... 147 9e-36
AC024878-1|AAK85513.1| 173|Caenorhabditis elegans Hypothetical ... 61 1e-09
AF016450-12|AAB65989.1| 278|Caenorhabditis elegans Hypothetical... 48 1e-05
U23524-5|AAC46821.2| 252|Caenorhabditis elegans Hypothetical pr... 32 0.41
Z48045-11|CAM33500.1| 887|Caenorhabditis elegans Hypothetical p... 32 0.54
Z48045-10|CAA88101.2| 849|Caenorhabditis elegans Hypothetical p... 32 0.54
U00067-6|AAL08037.1| 167|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81073-6|CAN86904.2| 215|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z81073-5|CAE17804.3| 242|Caenorhabditis elegans Hypothetical pr... 29 3.8
U52001-1|AAA96093.1| 656|Caenorhabditis elegans Feminization of... 29 3.8
J03172-1|AAA28055.1| 656|Caenorhabditis elegans protein ( C.ele... 29 3.8
Z92812-6|CAB07280.1| 372|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z81070-4|CAB03003.2| 474|Caenorhabditis elegans Hypothetical pr... 28 6.6
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z81081-4|CAB03092.2| 491|Caenorhabditis elegans Hypothetical pr... 28 8.8
AL023825-1|CAA19442.2| 491|Caenorhabditis elegans Hypothetical ... 28 8.8
AF052060-1|AAC06226.1| 491|Caenorhabditis elegans Olf-1/EBF tra... 28 8.8
>AF047659-11|AAC04428.1| 182|Caenorhabditis elegans Hypothetical
protein K07H8.3 protein.
Length = 182
Score = 147 bits (356), Expect = 9e-36
Identities = 64/89 (71%), Positives = 76/89 (85%)
Frame = +2
Query: 257 MQHCNLLCLPENYQMKYYFYHGLSWPQLSYVAEDEKGHIVGYVLAKMEEDGEDNRHGHIT 436
MQ+ NL+CLPENYQMKYYFYH LSWPQLSY+AED KG++VGYVLAKMEED + HGHIT
Sbjct: 14 MQNANLMCLPENYQMKYYFYHALSWPQLSYIAEDHKGNVVGYVLAKMEEDPGEEPHGHIT 73
Query: 437 SLAVKRSHRRLGLAQKLMNQASLAWLNAF 523
SLAVKRS+RRLGLA K+M+Q + A + +
Sbjct: 74 SLAVKRSYRRLGLANKMMDQTARAMVETY 102
Score = 92.3 bits (219), Expect = 4e-19
Identities = 42/64 (65%), Positives = 52/64 (81%)
Frame = +1
Query: 508 MVECFQAKYVSLHVRKSNRAALNLYTNSLGFKILEIEPKYYADGEDAYSMMRDLSAFAVD 687
MVE + AKYVSLHVR SNRAALNLY N+L F+I++ EPKYYADGEDAY+M RDL+ +A +
Sbjct: 98 MVETYNAKYVSLHVRVSNRAALNLYKNTLKFEIVDTEPKYYADGEDAYAMRRDLAKWAEE 157
Query: 688 NKTD 699
+
Sbjct: 158 RNIE 161
>AC024878-1|AAK85513.1| 173|Caenorhabditis elegans Hypothetical
protein Y97E10AL.3 protein.
Length = 173
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +2
Query: 251 YDMQHCNLLCLPENYQMKYYFYHGLSWPQLSYVAEDEKGHIVGYVLAKMEEDGED-NRHG 427
+ + NL E Y ++Y ++ +++P+ VAE G I+ YV+ K+E G D N HG
Sbjct: 13 FKFNNVNLDINTETYGFQFYLHYMMNYPEYYQVAEHPNGEIMAYVMGKIE--GRDTNWHG 70
Query: 428 HITSLAVKRSHRRLGLAQKLM 490
H+T+L+V + RRLGLA +M
Sbjct: 71 HVTALSVAPNFRRLGLAAYMM 91
>AF016450-12|AAB65989.1| 278|Caenorhabditis elegans Hypothetical
protein B0238.10 protein.
Length = 278
Score = 47.6 bits (108), Expect = 1e-05
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +2
Query: 281 LPENYQMKYYFYHGLSWPQLSYVAEDEKGHI-VGYVLAKMEEDGEDNRHGHITSLAVKRS 457
L E Y + Y Y +WP+ ++A D+ + +G VL K+E D G++ LAV S
Sbjct: 117 LSEPYSIYTYRYFLHNWPEYCFLAYDQTNNTYIGAVLCKLELDMYGRCKGYLAMLAVDES 176
Query: 458 HRRLGLAQKLMNQA 499
RRLG+ +L+ +A
Sbjct: 177 CRRLGIGTRLVRRA 190
>U23524-5|AAC46821.2| 252|Caenorhabditis elegans Hypothetical
protein C29F5.2 protein.
Length = 252
Score = 32.3 bits (70), Expect = 0.41
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 254 DMQHCNLLCLPENYQMKYYFYHGLS 328
D+QHC L C NY +Y + GLS
Sbjct: 121 DLQHCTLPCKSINYNFHFYSFKGLS 145
>Z48045-11|CAM33500.1| 887|Caenorhabditis elegans Hypothetical
protein C41C4.5b protein.
Length = 887
Score = 31.9 bits (69), Expect = 0.54
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = +1
Query: 445 CKEITS*IRISSETHESGITCMVECFQAKYVSLHVRKSNRAALNLYTNSLGFKILEIEPK 624
C+E + SS SG ++EC ++ L + N A + ++ L ++ ++ P
Sbjct: 625 CQETNYEVTYSSARWPSGSAKVMECLPGDFLCLEKYRKNAAMVQIFYEELNYETMQESPA 684
Query: 625 Y 627
Y
Sbjct: 685 Y 685
>Z48045-10|CAA88101.2| 849|Caenorhabditis elegans Hypothetical
protein C41C4.5a protein.
Length = 849
Score = 31.9 bits (69), Expect = 0.54
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = +1
Query: 445 CKEITS*IRISSETHESGITCMVECFQAKYVSLHVRKSNRAALNLYTNSLGFKILEIEPK 624
C+E + SS SG ++EC ++ L + N A + ++ L ++ ++ P
Sbjct: 587 CQETNYEVTYSSARWPSGSAKVMECLPGDFLCLEKYRKNAAMVQIFYEELNYETMQESPA 646
Query: 625 Y 627
Y
Sbjct: 647 Y 647
>U00067-6|AAL08037.1| 167|Caenorhabditis elegans Hypothetical
protein F54E7.9 protein.
Length = 167
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +1
Query: 532 YVSLHVRKSNRAALNLYTNSLGFKILEIEPKYY--ADGEDAYSMMR 663
+ LHV+ SN+ A+ Y N GF + + P+YY DA+ M +
Sbjct: 120 HAMLHVQTSNKTAIEFYKNR-GFNVDCLVPQYYQRCSPPDAFIMRK 164
>Z81073-6|CAN86904.2| 215|Caenorhabditis elegans Hypothetical
protein F30F8.10b protein.
Length = 215
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +2
Query: 416 NRH-GHITSLAVKRSHRRLGLAQKLMN 493
N H +I S+AV + RRLGLA +L+N
Sbjct: 94 NAHVAYILSIAVDKKFRRLGLATRLLN 120
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +1
Query: 535 VSLHVRKSNRAALNLYTNSLGFKILEIEPKYYADGE 642
V LHV +N AAL+ Y GF+ P+YY GE
Sbjct: 136 VFLHVLSTNSAALSFY-KMHGFEFHASLPEYYRIGE 170
>Z81073-5|CAE17804.3| 242|Caenorhabditis elegans Hypothetical
protein F30F8.10a protein.
Length = 242
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +2
Query: 416 NRH-GHITSLAVKRSHRRLGLAQKLMN 493
N H +I S+AV + RRLGLA +L+N
Sbjct: 121 NAHVAYILSIAVDKKFRRLGLATRLLN 147
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +1
Query: 535 VSLHVRKSNRAALNLYTNSLGFKILEIEPKYYADGE 642
V LHV +N AAL+ Y GF+ P+YY GE
Sbjct: 163 VFLHVLSTNSAALSFY-KMHGFEFHASLPEYYRIGE 197
>U52001-1|AAA96093.1| 656|Caenorhabditis elegans Feminization of xx
and xo animalsprotein 1, isoform a protein.
Length = 656
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +2
Query: 365 GH--IVGYVLAKMEEDGEDNRHGHITSLAVKRSHRRLGLAQKLM 490
GH IV Y+L K + NRHGH T L + ++G+ ++L+
Sbjct: 134 GHLDIVKYLLEKGADPHIPNRHGH-TCLMIASYRNKVGIVEELL 176
>J03172-1|AAA28055.1| 656|Caenorhabditis elegans protein (
C.elegans fem-1 gene,complete cds. ).
Length = 656
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +2
Query: 365 GH--IVGYVLAKMEEDGEDNRHGHITSLAVKRSHRRLGLAQKLM 490
GH IV Y+L K + NRHGH T L + ++G+ ++L+
Sbjct: 134 GHLDIVKYLLEKGADPHIPNRHGH-TCLMIASYRNKVGIVEELL 176
>Z92812-6|CAB07280.1| 372|Caenorhabditis elegans Hypothetical
protein T03E6.6 protein.
Length = 372
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -3
Query: 132 VLEQIEIWINSTSKQC-TNFKI*LIGEV 52
+L+Q E W NST +C T F I LI EV
Sbjct: 109 ILQQNECWQNSTYLKCLTTFTINLIAEV 136
>Z81070-4|CAB03003.2| 474|Caenorhabditis elegans Hypothetical
protein F26E4.5 protein.
Length = 474
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -2
Query: 181 GCLTSDAGGVSDIPPSSSRTNRNLDKQHFQTMYQLQNLINW 59
G TS + V + P+ ++N +L K H +L+ + NW
Sbjct: 38 GASTSLSKSVEESAPNKDKSNSSLVKSHHVLKIKLKKITNW 78
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical
protein F40H6.5 protein.
Length = 1288
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +2
Query: 269 NLLCLPENYQMKYYFYHGLSWPQLSYVAEDEKGHIVGYVLAKMEEDGEDNRHGHITSLA 445
NL+ + E Y+ +YY G + L + G+IVGY + ++ ++ +GH+ S A
Sbjct: 432 NLVPIRELYKDRYYVVAGNDYQYLIDDGYNITGNIVGYTV-DCKDSKDEFVYGHLPSYA 489
>Z81081-4|CAB03092.2| 491|Caenorhabditis elegans Hypothetical
protein Y16B4A.1 protein.
Length = 491
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 284 PENYQMKYYFYHGLS-WPQLSYVAEDEKGHIVGYVLAKMEEDGEDNRHG 427
P N + +F+ ++ + + S E E+ G+V + E DG+D R+G
Sbjct: 62 PNNLRKSNFFHFVIALYDRNSQPIEVERTQFAGFVEKEKEVDGQDTRNG 110
>AL023825-1|CAA19442.2| 491|Caenorhabditis elegans Hypothetical
protein Y16B4A.1 protein.
Length = 491
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 284 PENYQMKYYFYHGLS-WPQLSYVAEDEKGHIVGYVLAKMEEDGEDNRHG 427
P N + +F+ ++ + + S E E+ G+V + E DG+D R+G
Sbjct: 62 PNNLRKSNFFHFVIALYDRNSQPIEVERTQFAGFVEKEKEVDGQDTRNG 110
>AF052060-1|AAC06226.1| 491|Caenorhabditis elegans Olf-1/EBF
transcription factor protein.
Length = 491
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 284 PENYQMKYYFYHGLS-WPQLSYVAEDEKGHIVGYVLAKMEEDGEDNRHG 427
P N + +F+ ++ + + S E E+ G+V + E DG+D R+G
Sbjct: 62 PNNLRKSNFFHFVIALYDRNSQPIEVERTQFAGFVEKEKEVDGQDTRNG 110
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,147,957
Number of Sequences: 27780
Number of extensions: 343341
Number of successful extensions: 858
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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