Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40172
         (788 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g13780.1 68418.m01607 GCN5-related N-acetyltransferase, putat...   131   6e-31
At1g03150.1 68414.m00292 GCN5-related N-acetyltransferase (GNAT)...    64   1e-10
At2g38130.2 68415.m04681 GCN5-related N-acetyltransferase, putat...    44   2e-04
At2g38130.1 68415.m04680 GCN5-related N-acetyltransferase, putat...    44   2e-04
At1g03650.1 68414.m00344 GCN5-related N-acetyltransferase (GNAT)...    36   0.023
At2g06025.1 68415.m00659 GCN5-related N-acetyltransferase (GNAT)...    28   6.1  
At1g24110.1 68414.m03042 peroxidase, putative similar to peroxid...    28   6.1  

>At5g13780.1 68418.m01607 GCN5-related N-acetyltransferase, putative
           similar to SP|P07347 N-terminal acetyltransferase
           complex ARD1 subunit (Arrest-defective protein 1)
           {Saccharomyces cerevisiae}; contains Pfam profile
           PF00583: acetyltransferase, GNAT family
          Length = 192

 Score =  131 bits (316), Expect = 6e-31
 Identities = 62/84 (73%), Positives = 67/84 (79%)
 Frame = +2

Query: 257 MQHCNLLCLPENYQMKYYFYHGLSWPQLSYVAEDEKGHIVGYVLAKMEEDGEDNRHGHIT 436
           MQ CNL+CLPENYQMKYY YH LSWPQL YVAED  G IVGYVLAKMEE+  +  HGHIT
Sbjct: 15  MQACNLMCLPENYQMKYYLYHILSWPQLLYVAEDYNGRIVGYVLAKMEEESNE-CHGHIT 73

Query: 437 SLAVKRSHRRLGLAQKLMNQASLA 508
           SLAV R+HR+LGLA KLM  A  A
Sbjct: 74  SLAVLRTHRKLGLATKLMTAAQAA 97



 Score = 82.2 bits (194), Expect = 4e-16
 Identities = 35/54 (64%), Positives = 46/54 (85%)
 Frame = +1

Query: 508 MVECFQAKYVSLHVRKSNRAALNLYTNSLGFKILEIEPKYYADGEDAYSMMRDL 669
           M + ++A+YVSLHVR+SNRAA NLYT +LG+KI ++E KYYADGEDAY M ++L
Sbjct: 98  MEQVYEAEYVSLHVRRSNRAAFNLYTETLGYKINDVEAKYYADGEDAYDMRKNL 151


>At1g03150.1 68414.m00292 GCN5-related N-acetyltransferase (GNAT)
           family protein similar to SP|P07347 N-terminal
           acetyltransferase complex ARD1 subunit (Arrest-defective
           protein 1) {Saccharomyces cerevisiae}; contains Pfam
           profile PF00583: acetyltransferase, GNAT family
          Length = 174

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 30/75 (40%), Positives = 45/75 (60%)
 Frame = +2

Query: 269 NLLCLPENYQMKYYFYHGLSWPQLSYVAEDEKGHIVGYVLAKMEEDGEDNRHGHITSLAV 448
           NL  L E + M +Y  +   WP   +VAE     ++GY++ K+E  GE + HGH+T++ V
Sbjct: 19  NLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRVMGYIMGKVEGQGE-SWHGHVTAVTV 77

Query: 449 KRSHRRLGLAQKLMN 493
              +RR  LA+KLMN
Sbjct: 78  SPEYRRQQLAKKLMN 92



 Score = 33.9 bits (74), Expect = 0.12
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = +1

Query: 523 QAKYVSLHVRKSNRAALNLYTNSLGFKILEIEPKYYADGEDAYSMMRDLS 672
           +A +V L VR SN  A+ +Y   LG+ I     +YY+  ED   M + LS
Sbjct: 103 KAYFVDLFVRASNTPAIKMY-EKLGYIIYRRVLRYYSGEEDGLDMRKALS 151


>At2g38130.2 68415.m04681 GCN5-related N-acetyltransferase, putative
           similar to SP|Q03503 L-A virus GAG protein
           N-acetyltransferase (EC 2.3.1.-) {Saccharomyces
           cerevisiae}; contains Pfam profile PF00583:
           acetyltransferase, GNAT family
          Length = 190

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 27/80 (33%), Positives = 43/80 (53%)
 Frame = +2

Query: 281 LPENYQMKYYFYHGLSWPQLSYVAEDEKGHIVGYVLAKMEEDGEDNRHGHITSLAVKRSH 460
           L E Y +  Y Y    WPQL ++A   KG  VG ++ KM +  +  R G+I  L V + +
Sbjct: 38  LSEPYSIFTYRYFVYLWPQLCFLAF-HKGKCVGTIVCKMGDHRQTFR-GYIAMLVVIKPY 95

Query: 461 RRLGLAQKLMNQASLAWLNA 520
           R  G+A +L+ +A  A + +
Sbjct: 96  RGRGIASELVTRAIKAMMES 115


>At2g38130.1 68415.m04680 GCN5-related N-acetyltransferase, putative
           similar to SP|Q03503 L-A virus GAG protein
           N-acetyltransferase (EC 2.3.1.-) {Saccharomyces
           cerevisiae}; contains Pfam profile PF00583:
           acetyltransferase, GNAT family
          Length = 190

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 27/80 (33%), Positives = 43/80 (53%)
 Frame = +2

Query: 281 LPENYQMKYYFYHGLSWPQLSYVAEDEKGHIVGYVLAKMEEDGEDNRHGHITSLAVKRSH 460
           L E Y +  Y Y    WPQL ++A   KG  VG ++ KM +  +  R G+I  L V + +
Sbjct: 38  LSEPYSIFTYRYFVYLWPQLCFLAF-HKGKCVGTIVCKMGDHRQTFR-GYIAMLVVIKPY 95

Query: 461 RRLGLAQKLMNQASLAWLNA 520
           R  G+A +L+ +A  A + +
Sbjct: 96  RGRGIASELVTRAIKAMMES 115


>At1g03650.1 68414.m00344 GCN5-related N-acetyltransferase (GNAT)
           family protein low similarity to SP|P07347 N-terminal
           acetyltransferase complex ARD1 subunit (Arrest-defective
           protein 1) {Saccharomyces cerevisiae}; contains Pfam
           profile PF00583: acetyltransferase, GNAT family
          Length = 158

 Score = 36.3 bits (80), Expect = 0.023
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +1

Query: 535 VSLHVRKSNRAALNLYTNSLGFKILEIEPKYYADGEDAYSMMRD 666
           VSLHV  +  +A+NLY   LGF++  +   YY+   DAY M  D
Sbjct: 111 VSLHVDPTRTSAVNLY-KKLGFQVDCLVKSYYSADRDAYRMYLD 153


>At2g06025.1 68415.m00659 GCN5-related N-acetyltransferase (GNAT)
           family protein low similarity to streptothricin
           acetyltransferase homolog [Campylobacter jejuni]
           GI:6650363; contains Pfam profile PF00583:
           acetyltransferase, GNAT family
          Length = 288

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +2

Query: 383 VLAKMEEDGEDNRHGHITSLAVKRSHRRLGLAQKLMNQA 499
           +   + ++G  NR+G+I +L V +S RR G+A  ++  A
Sbjct: 197 LFCSINQEGS-NRYGYIANLCVAKSARRQGIACNMLRFA 234


>At1g24110.1 68414.m03042 peroxidase, putative similar to peroxidase
           ATP26a, GB:CAA72487
          Length = 326

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 21/87 (24%), Positives = 42/87 (48%)
 Frame = +1

Query: 445 CKEITS*IRISSETHESGITCMVECFQAKYVSLHVRKSNRAALNLYTNSLGFKILEIEPK 624
           CKE  S  RI +++ ++G   M   + A+   L    +N   ++ + +   F   + +  
Sbjct: 197 CKEFAS--RIFNKSDQNGPVEMNPKYAAELRKLCANYTNDEQMSAFNDV--FTPGKFDNM 252

Query: 625 YYADGEDAYSMMRDLSAFAVDNKTDSM 705
           YY + +  Y +++   A A DN+T S+
Sbjct: 253 YYKNLKHGYGLLQSDHAIAFDNRTRSL 279


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,975,238
Number of Sequences: 28952
Number of extensions: 311745
Number of successful extensions: 632
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 629
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1775300800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)