Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40171
         (623 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1477|AAF46612.1|  931|Drosophila melanogaster CG2111-PA...    29   5.1  
BT001312-1|AAN71067.1|  702|Drosophila melanogaster AT14086p pro...    28   8.9  
AE014297-4050|AAF56657.2|  661|Drosophila melanogaster CG6265-PA...    28   8.9  
AE014297-4049|AAN14386.1|  841|Drosophila melanogaster CG6265-PB...    28   8.9  

>AE014298-1477|AAF46612.1|  931|Drosophila melanogaster CG2111-PA
           protein.
          Length = 931

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = -3

Query: 372 RLIRGLSIFSCFLCWLSMFLAHKRYAEITVVMPYDDLTGLISLEKYKI 229
           RL +GL+I     CWL        Y  +TV   YD  T ++S +++ I
Sbjct: 472 RLGKGLNITRIMKCWLGQ----PGYPLVTVTRNYDHRTAIVSQQRFFI 515


>BT001312-1|AAN71067.1|  702|Drosophila melanogaster AT14086p
           protein.
          Length = 702

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 12/56 (21%), Positives = 27/56 (48%)
 Frame = +2

Query: 194 YREYYNGIS*KKILYFSREISPVRSSYGMTTVISAYLLCAKNIESQQRKQENILKP 361
           Y  Y   +  K +LY    ++   ++ G+T ++   +  A+ +   + + EN+ KP
Sbjct: 364 YLHYVRKVIEKYLLYVDPNVNQEEATLGITELVKQGVRVARKVHEFKEEAENMTKP 419


>AE014297-4050|AAF56657.2|  661|Drosophila melanogaster CG6265-PA,
           isoform A protein.
          Length = 661

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 12/56 (21%), Positives = 27/56 (48%)
 Frame = +2

Query: 194 YREYYNGIS*KKILYFSREISPVRSSYGMTTVISAYLLCAKNIESQQRKQENILKP 361
           Y  Y   +  K +LY    ++   ++ G+T ++   +  A+ +   + + EN+ KP
Sbjct: 323 YLHYVRKVIEKYLLYVDPNVNQEEATLGITELVKQGVRVARKVHEFKEEAENMTKP 378


>AE014297-4049|AAN14386.1|  841|Drosophila melanogaster CG6265-PB,
           isoform B protein.
          Length = 841

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 12/56 (21%), Positives = 27/56 (48%)
 Frame = +2

Query: 194 YREYYNGIS*KKILYFSREISPVRSSYGMTTVISAYLLCAKNIESQQRKQENILKP 361
           Y  Y   +  K +LY    ++   ++ G+T ++   +  A+ +   + + EN+ KP
Sbjct: 323 YLHYVRKVIEKYLLYVDPNVNQEEATLGITELVKQGVRVARKVHEFKEEAENMTKP 378


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,248,845
Number of Sequences: 53049
Number of extensions: 555658
Number of successful extensions: 1318
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1318
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)