Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40170
         (639 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    24   0.93 
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    24   0.93 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.8  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   3.8  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   8.7  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -2

Query: 524 GVGMIGENLTHDTQSLCPSSWMV 456
           G  +I  NLT  T SLC  SW V
Sbjct: 166 GTPIIFHNLTLITYSLCVISWAV 188


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -2

Query: 524 GVGMIGENLTHDTQSLCPSSWMV 456
           G  +I  NLT  T SLC  SW V
Sbjct: 166 GTPIIFHNLTLITYSLCVISWAV 188


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +1

Query: 298 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 423
           RLW  AA    R + D   DV S     D    ++  RD+ +
Sbjct: 567 RLWPRAAAFAERVWSDPQLDVTSFTIQEDVYTRLNTHRDRLV 608


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 55  TPRNS*RPQWLGYSNCN*SEIPGHDLIFL 141
           T RN+ + QWL  S+   SEIP     FL
Sbjct: 291 TFRNTKKLQWLDTSHNRISEIPNDLFRFL 319


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/43 (25%), Positives = 17/43 (39%)
 Frame = +2

Query: 2   FRESSLFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMI 130
           ++ + L+K   K    L L G L     +      NP +  MI
Sbjct: 281 YQLTDLYKKIKKAFPPLSLHGQLLWREFFYCAATKNPNFDKMI 323


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,998
Number of Sequences: 336
Number of extensions: 3728
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)