Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40170
(639 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 153 7e-38
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 152 2e-37
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 151 4e-37
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 65 4e-11
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 63 1e-10
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 63 1e-10
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 62 4e-10
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 59 3e-09
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 59 3e-09
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 57 1e-08
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 56 2e-08
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 56 2e-08
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 55 5e-08
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 54 6e-08
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 54 6e-08
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 54 6e-08
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 54 6e-08
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 54 6e-08
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 54 1e-07
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 54 1e-07
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 53 1e-07
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 53 1e-07
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 53 1e-07
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 53 1e-07
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 53 1e-07
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 52 2e-07
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 52 2e-07
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 52 4e-07
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 51 6e-07
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 51 6e-07
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 51 6e-07
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 51 6e-07
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 51 6e-07
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 50 1e-06
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 50 1e-06
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 50 1e-06
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 50 2e-06
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 50 2e-06
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 50 2e-06
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 50 2e-06
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 50 2e-06
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 49 3e-06
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 48 4e-06
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 48 4e-06
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 48 4e-06
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 48 4e-06
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 48 5e-06
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 48 7e-06
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 47 9e-06
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 47 9e-06
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 47 9e-06
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 47 1e-05
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 47 1e-05
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 47 1e-05
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 46 2e-05
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 46 2e-05
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 46 2e-05
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 46 2e-05
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 46 2e-05
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 46 2e-05
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 46 2e-05
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 46 2e-05
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 46 3e-05
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 46 3e-05
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 46 3e-05
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 46 3e-05
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 46 3e-05
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 45 4e-05
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 45 4e-05
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 45 5e-05
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 45 5e-05
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 45 5e-05
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 45 5e-05
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 45 5e-05
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 44 9e-05
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 44 9e-05
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 44 9e-05
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 44 9e-05
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 44 9e-05
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 44 1e-04
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 44 1e-04
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 44 1e-04
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 43 2e-04
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 43 2e-04
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 43 2e-04
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 42 3e-04
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 42 3e-04
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 42 3e-04
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 42 3e-04
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 42 3e-04
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 42 3e-04
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 42 5e-04
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 42 5e-04
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 42 5e-04
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 42 5e-04
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 42 5e-04
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 42 5e-04
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 42 5e-04
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 41 6e-04
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 41 6e-04
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 41 6e-04
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 41 8e-04
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 41 8e-04
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 41 8e-04
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 40 0.001
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 40 0.001
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 40 0.001
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 40 0.001
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 40 0.002
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 39 0.003
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 39 0.003
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 38 0.004
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 38 0.006
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 38 0.006
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 38 0.007
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 38 0.007
At1g80710.1 68414.m09470 transducin family protein / WD-40 repea... 38 0.007
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 37 0.010
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 37 0.010
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 37 0.010
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 37 0.013
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 36 0.017
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 36 0.017
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 36 0.017
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 36 0.017
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 36 0.017
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 36 0.017
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 36 0.017
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 36 0.017
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 36 0.017
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 36 0.023
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 36 0.023
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 36 0.023
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 36 0.023
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 36 0.023
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 36 0.023
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 36 0.023
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 36 0.030
At2g47790.1 68415.m05965 transducin family protein / WD-40 repea... 36 0.030
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 36 0.030
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 36 0.030
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 36 0.030
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 35 0.040
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 35 0.040
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 35 0.040
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 35 0.040
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 35 0.052
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 35 0.052
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 35 0.052
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 35 0.052
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 35 0.052
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 34 0.069
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 34 0.069
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 34 0.069
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 34 0.069
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 34 0.069
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 34 0.069
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 34 0.092
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 34 0.092
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 33 0.12
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 33 0.12
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 33 0.12
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 33 0.12
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 33 0.16
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 33 0.16
At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 33 0.16
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 33 0.16
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 33 0.21
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 33 0.21
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 33 0.21
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 33 0.21
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 33 0.21
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 32 0.28
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 32 0.28
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 32 0.37
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 31 0.49
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 31 0.49
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 31 0.49
At5g60050.1 68418.m07530 PRLI-interacting factor-related contain... 31 0.65
At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 31 0.65
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 31 0.65
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 31 0.65
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 31 0.65
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 31 0.65
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 31 0.65
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 31 0.85
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 31 0.85
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 30 1.1
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 30 1.1
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 30 1.1
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 30 1.1
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 30 1.1
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 30 1.5
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 30 1.5
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 30 1.5
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 29 2.0
At5g04560.1 68418.m00456 DEMETER protein (DME) identical to DEME... 29 2.0
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 29 2.0
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 29 2.6
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 29 2.6
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 29 3.4
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 28 4.5
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 28 6.0
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 28 6.0
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 28 6.0
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 28 6.0
At2g35510.1 68415.m04349 WWE domain-containing protein contains ... 28 6.0
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 28 6.0
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 28 6.0
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 27 7.9
At4g03970.1 68417.m00561 Ulp1 protease family protein contains P... 27 7.9
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 27 7.9
At2g28940.1 68415.m03517 protein kinase family protein contains ... 27 7.9
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 153 bits (372), Expect = 7e-38
Identities = 71/92 (77%), Positives = 78/92 (84%), Gaps = 3/92 (3%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
DG +ALSGSWD LRLWDLA G+TTRRF HTKDVLSVAFS DNRQIVS SRD+TIKLWN
Sbjct: 74 DGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN 133
Query: 436 TLAECKYTIQD-DGHSDWVSCVRFSP--IMPT 522
TL ECKYTI + DGH +WVSCVRFSP ++PT
Sbjct: 134 TLGECKYTISEGDGHKEWVSCVRFSPNTLVPT 165
Score = 88.2 bits (209), Expect = 4e-18
Identities = 39/72 (54%), Positives = 55/72 (76%)
Frame = +2
Query: 38 MSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY 217
M+E L L+G +R H VT IAT D+I+++SRDK++I+WKLT+D+ +YG+ Q+RL
Sbjct: 1 MAEGLVLKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLT 60
Query: 218 GHSHFISDVVLS 253
GHSHF+ DVVLS
Sbjct: 61 GHSHFVEDVVLS 72
Score = 48.4 bits (110), Expect = 4e-06
Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWD-LAAGK-TTRRFEDHTKDVLSVAFSVDNR--QIVSGSRDKTI 423
D +S S D+T++LW+ L K T + H + V V FS + IVS S DKT+
Sbjct: 116 DNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTV 175
Query: 424 KLWNTLAECKYTIQDDGHSDWVSCVRFSP 510
K+WN L CK GHS +++ V SP
Sbjct: 176 KVWN-LQNCKLRNSLVGHSGYLNTVAVSP 203
Score = 44.8 bits (101), Expect = 5e-05
Identities = 24/61 (39%), Positives = 34/61 (55%)
Frame = +1
Query: 271 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 450
+S SWDKT+++W+L K H+ + +VA S D SG +D I LW+ LAE
Sbjct: 167 VSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWD-LAEG 225
Query: 451 K 453
K
Sbjct: 226 K 226
Score = 39.1 bits (87), Expect = 0.002
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Frame = +1
Query: 271 LSGSWDKTLRLW-----DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
++ S DK++ LW D + G RR H+ V V S D + +SGS D ++LW+
Sbjct: 32 VTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWD 91
Query: 436 TLAECKYTIQDDGHSDWVSCVRFS 507
LA + T + GH+ V V FS
Sbjct: 92 -LATGETTRRFVGHTKDVLSVAFS 114
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +3
Query: 522 PIIVSCGWDRTVKVWHLTNW*APRLTHLGHSGNL 623
P IVS WD+TVKVW+L N R + +GHSG L
Sbjct: 164 PTIVSASWDKTVKVWNLQNC-KLRNSLVGHSGYL 196
Score = 36.7 bits (81), Expect = 0.013
Identities = 23/71 (32%), Positives = 37/71 (52%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
DG+ SG D + LWDLA GK E + + S+ FS NR + + + +I++W+
Sbjct: 204 DGSLCASGGKDGVILLWDLAEGKKLYSLEAGS-IIHSLCFS-PNRYWLCAATENSIRIWD 261
Query: 436 TLAECKYTIQD 468
E K ++D
Sbjct: 262 --LESKSVVED 270
Score = 34.7 bits (76), Expect = 0.052
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +2
Query: 44 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI 199
+ KLR +L GH+G++ +A +P + S +D +++W L + Y +
Sbjct: 181 QNCKLRNSLVGHSGYLNTVAVSPD-GSLCASGGKDGVILLWDLAEGKKLYSL 231
Score = 32.7 bits (71), Expect = 0.21
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Frame = +1
Query: 346 HTKDVLSVAFSVDNRQI-VSGSRDKTIKLWNTLAECK-YTIQD---DGHSDWVSCVRFS 507
HT V ++A +DN I V+ SRDK+I LW + K Y + GHS +V V S
Sbjct: 14 HTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLS 72
Score = 32.3 bits (70), Expect = 0.28
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 74 GHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 250
GH WV+ + +P I+S+S DKT+ VW L N + + L GHS +++ V +
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL----QNCKL-RNSLVGHSGYLNTVAV 201
Query: 251 S 253
S
Sbjct: 202 S 202
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 152 bits (368), Expect = 2e-37
Identities = 70/92 (76%), Positives = 78/92 (84%), Gaps = 3/92 (3%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
DG +ALSGSWD LRLWDLA G++TRRF HTKDVLSVAFS DNRQIVS SRD+TIKLWN
Sbjct: 74 DGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN 133
Query: 436 TLAECKYTIQD-DGHSDWVSCVRFSP--IMPT 522
TL ECKYTI + DGH +WVSCVRFSP ++PT
Sbjct: 134 TLGECKYTISEADGHKEWVSCVRFSPNTLVPT 165
Score = 87.4 bits (207), Expect = 7e-18
Identities = 38/72 (52%), Positives = 55/72 (76%)
Frame = +2
Query: 38 MSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY 217
M+E L L+GT+ H VT IAT D+I++SSRDK++I+WKLT+++ +YG+ Q+R+
Sbjct: 1 MAEGLVLKGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMT 60
Query: 218 GHSHFISDVVLS 253
GHSHF+ DVVLS
Sbjct: 61 GHSHFVQDVVLS 72
Score = 48.8 bits (111), Expect = 3e-06
Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWD-LAAGK-TTRRFEDHTKDVLSVAFSVDNR--QIVSGSRDKTI 423
D +S S D+T++LW+ L K T + H + V V FS + IVS S DKT+
Sbjct: 116 DNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTV 175
Query: 424 KLWNTLAECKYTIQDDGHSDWVSCVRFSP 510
K+WN L CK GHS +++ V SP
Sbjct: 176 KVWN-LQNCKLRNTLAGHSGYLNTVAVSP 203
Score = 45.2 bits (102), Expect = 4e-05
Identities = 24/61 (39%), Positives = 34/61 (55%)
Frame = +1
Query: 271 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 450
+S SWDKT+++W+L K H+ + +VA S D SG +D I LW+ LAE
Sbjct: 167 VSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWD-LAEG 225
Query: 451 K 453
K
Sbjct: 226 K 226
Score = 39.9 bits (89), Expect = 0.001
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Frame = +1
Query: 250 VYDGNYALSGSWDKTLRLW-----DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRD 414
V + + ++ S DK++ LW D + G RR H+ V V S D + +SGS D
Sbjct: 25 VDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWD 84
Query: 415 KTIKLWNTLAECKYTIQDDGHSDWVSCVRFS 507
++LW+ LA + T + GH+ V V FS
Sbjct: 85 GELRLWD-LATGESTRRFVGHTKDVLSVAFS 114
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/34 (58%), Positives = 22/34 (64%)
Frame = +3
Query: 522 PIIVSCGWDRTVKVWHLTNW*APRLTHLGHSGNL 623
P IVS WD+TVKVW+L N R T GHSG L
Sbjct: 164 PTIVSASWDKTVKVWNLQNC-KLRNTLAGHSGYL 196
Score = 37.1 bits (82), Expect = 0.010
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +2
Query: 44 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI 199
+ KLR TL GH+G++ +A +P + S +D +++W L + Y +
Sbjct: 181 QNCKLRNTLAGHSGYLNTVAVSPD-GSLCASGGKDGVILLWDLAEGKKLYSL 231
Score = 36.7 bits (81), Expect = 0.013
Identities = 23/71 (32%), Positives = 37/71 (52%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
DG+ SG D + LWDLA GK E + + S+ FS NR + + + +I++W+
Sbjct: 204 DGSLCASGGKDGVILLWDLAEGKKLYSLEAGS-IIHSLCFS-PNRYWLCAATENSIRIWD 261
Query: 436 TLAECKYTIQD 468
E K ++D
Sbjct: 262 --LESKSVVED 270
Score = 31.9 bits (69), Expect = 0.37
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 74 GHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 250
GH WV+ + +P I+S+S DKT+ VW L N + + L GHS +++ V +
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL----QNCKL-RNTLAGHSGYLNTVAV 201
Query: 251 S 253
S
Sbjct: 202 S 202
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 151 bits (366), Expect = 4e-37
Identities = 71/93 (76%), Positives = 78/93 (83%), Gaps = 4/93 (4%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
DG +ALSGSWD LRLWDLAAG +TRRF HTKDVLSVAFS+DNRQIVS SRD+TIKLWN
Sbjct: 74 DGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWN 133
Query: 436 TLAECKYTIQD--DGHSDWVSCVRFSP--IMPT 522
TL ECKYTI + +GH DWVSCVRFSP + PT
Sbjct: 134 TLGECKYTISEGGEGHRDWVSCVRFSPNTLQPT 166
Score = 91.5 bits (217), Expect = 4e-19
Identities = 41/72 (56%), Positives = 55/72 (76%)
Frame = +2
Query: 38 MSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY 217
M+E L L+GT+R H VT IAT D+I+S+SRDK++I+WKLT+D+ YG+ Q+RL
Sbjct: 1 MAEGLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLT 60
Query: 218 GHSHFISDVVLS 253
GHSHF+ DVVLS
Sbjct: 61 GHSHFVEDVVLS 72
Score = 52.0 bits (119), Expect = 3e-07
Identities = 37/90 (41%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWD-LAAGKTT--RRFEDHTKDVLSVAFSVDNRQ--IVSGSRDKT 420
D +S S D+T++LW+ L K T E H V V FS + Q IVS S DKT
Sbjct: 116 DNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKT 175
Query: 421 IKLWNTLAECKYTIQDDGHSDWVSCVRFSP 510
+K+WN L+ CK GH+ +VS V SP
Sbjct: 176 VKVWN-LSNCKLRSTLAGHTGYVSTVAVSP 204
Score = 49.2 bits (112), Expect = 2e-06
Identities = 29/80 (36%), Positives = 43/80 (53%)
Frame = +1
Query: 271 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 450
+S SWDKT+++W+L+ K HT V +VA S D SG +D + LW+ LAE
Sbjct: 168 VSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWD-LAEG 226
Query: 451 KYTIQDDGHSDWVSCVRFSP 510
K + +S + + FSP
Sbjct: 227 KKLYSLEANS-VIHALCFSP 245
Score = 40.3 bits (90), Expect = 0.001
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Frame = +1
Query: 271 LSGSWDKTLRLW-----DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
+S S DK++ LW D A G RR H+ V V S D + +SGS D ++LW+
Sbjct: 32 VSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWD 91
Query: 436 TLAECKYTIQDDGHSDWVSCVRFS 507
LA T + GH+ V V FS
Sbjct: 92 -LAAGVSTRRFVGHTKDVLSVAFS 114
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/36 (52%), Positives = 23/36 (63%)
Frame = +3
Query: 510 NHANPIIVSCGWDRTVKVWHLTNW*APRLTHLGHSG 617
N P IVS WD+TVKVW+L+N R T GH+G
Sbjct: 161 NTLQPTIVSASWDKTVKVWNLSNC-KLRSTLAGHTG 195
Score = 37.5 bits (83), Expect = 0.007
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2
Query: 53 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI 199
KLR TL GH G+V+ +A +P + S +D +++W L + Y +
Sbjct: 185 KLRSTLAGHTGYVSTVAVSPD-GSLCASGGKDGVVLLWDLAEGKKLYSL 232
Score = 35.9 bits (79), Expect = 0.023
Identities = 23/71 (32%), Positives = 37/71 (52%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
DG+ SG D + LWDLA GK E ++ + ++ FS NR + + + IK+W+
Sbjct: 205 DGSLCASGGKDGVVLLWDLAEGKKLYSLEANSV-IHALCFS-PNRYWLCAATEHGIKIWD 262
Query: 436 TLAECKYTIQD 468
E K ++D
Sbjct: 263 --LESKSIVED 271
Score = 33.9 bits (74), Expect = 0.092
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Frame = +1
Query: 346 HTKDVLSVAFSVDNRQI-VSGSRDKTIKLWNTLAECK-YTIQD---DGHSDWVSCVRFS 507
HT V ++A +DN I VS SRDK+I LW + K Y + GHS +V V S
Sbjct: 14 HTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLS 72
Score = 33.5 bits (73), Expect = 0.12
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 74 GHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 250
GH WV+ + +P I+S+S DKT+ VW L+ + + L GH+ ++S V +
Sbjct: 148 GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK-----LRSTLAGHTGYVSTVAV 202
Query: 251 S 253
S
Sbjct: 203 S 203
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 64.9 bits (151), Expect = 4e-11
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
DG + S S+DK++RLW+ G+ F H V V++S D+R ++SGS+D T+K+W
Sbjct: 371 DGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWE 430
Query: 436 TLAECKYTIQD-DGHSDWVSCVRFSP 510
K QD GH+D V V +SP
Sbjct: 431 --IRTKKLKQDLPGHADEVFAVDWSP 454
Score = 56.4 bits (130), Expect = 2e-08
Identities = 30/86 (34%), Positives = 42/86 (48%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
DG SGS D T+RLWDL + H VL+VA+S D + +VSGS+ I WN
Sbjct: 120 DGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWN 179
Query: 436 TLAECKYTIQDDGHSDWVSCVRFSPI 513
GH W++ + + P+
Sbjct: 180 PKKGELEGSPLTGHKKWITGISWEPV 205
Score = 54.4 bits (125), Expect = 6e-08
Identities = 22/59 (37%), Positives = 35/59 (59%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 432
D LSGS D TL++W++ K + H +V +V +S D ++VSG +D+ +KLW
Sbjct: 413 DSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 49.2 bits (112), Expect = 2e-06
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +1
Query: 346 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK-YTIQDDGHSDWVSCVRFSP 510
H + VL V+FS D +Q+ SGS D T++LW+ E +T + GH +WV V +SP
Sbjct: 108 HAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCK--GHKNWVLTVAWSP 161
Score = 43.2 bits (97), Expect = 1e-04
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 271 LSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
+SGS D T+ LW+ + K + R H + V V FS D + I S S DK+++LWN
Sbjct: 333 VSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWN 388
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/79 (31%), Positives = 39/79 (49%)
Frame = +1
Query: 271 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 450
++ S D R+WD+ K+ HT V V + D I +GS+D TIK+W T +
Sbjct: 215 VTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDGI-IYTGSQDCTIKMWET-TQG 272
Query: 451 KYTIQDDGHSDWVSCVRFS 507
K + GH W++ + S
Sbjct: 273 KLIRELKGHGHWINSLALS 291
Score = 29.5 bits (63), Expect(2) = 0.036
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +2
Query: 119 PDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 253
P+ ++S S D T+ +W+ + + P+KRL GH ++ V S
Sbjct: 329 PERLVSGSDDFTMFLWEPSVSKQ----PKKRLTGHQQLVNHVYFS 369
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 71 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIP 202
RGH G V Q++ + ++LS S+D TL +W++ + +P
Sbjct: 399 RGHVGPVYQVSWSAD-SRLLLSGSKDSTLKIWEIRTKKLKQDLP 441
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +2
Query: 65 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 244
T +GH WV +A +P ++ S S+ + W + E G P L GH +I+ +
Sbjct: 146 TCKGHKNWVLTVAWSPDGKHLV-SGSKSGEICCWNPKKGELE-GSP---LTGHKKWITGI 200
Score = 24.6 bits (51), Expect(2) = 0.036
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 35 KMSETL--KLRGTLRGHNGWVTQIATNPKY 118
KM ET KL L+GH W+ +A + +Y
Sbjct: 265 KMWETTQGKLIRELKGHGHWINSLALSTEY 294
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 63.3 bits (147), Expect = 1e-10
Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +1
Query: 262 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-T 438
NY +GS DKT+RLWD+ G+ R F H VLS+A S D R + SG D TI +W+ +
Sbjct: 512 NYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLS 571
Query: 439 LAECKYTIQDDGHSDWVSCVRFS 507
A C + GH+ V + +S
Sbjct: 572 TARCITPLM--GHNSCVWSLSYS 592
Score = 59.3 bits (137), Expect = 2e-09
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
DG Y SG D T+ +WDL+ + H V S+++S + + SGS D T+KLW+
Sbjct: 552 DGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWD 611
Query: 436 TLAECKYTIQDD--GHSDWVSCVRFSPIMPTPL 528
+ K T ++ G+S+ + +R P TP+
Sbjct: 612 VTSSTKLTKAEEKNGNSNRLRSLRTFPTKSTPV 644
Score = 39.9 bits (89), Expect = 0.001
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +1
Query: 259 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 438
G+Y S S D+T R+W + + R H D V + + I +GS DKT++LW+
Sbjct: 472 GHYFASCSHDRTARIWSMDRIQPLRIMAGHLSD---VDWHPNCNYIATGSSDKTVRLWDV 528
Query: 439 -LAECKYTIQDDGHSDWVSCVRFSP 510
EC GH V + SP
Sbjct: 529 QTGECVRIF--IGHRSMVLSLAMSP 551
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +1
Query: 259 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
G++ LS S D T+RLW ++ H V FS S S D+T ++W+
Sbjct: 430 GDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWS 488
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 68 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN 187
L GH+G V +P D +LSSS D T+ +W + N
Sbjct: 414 LLGHSGPVYSATFSPP-GDFVLSSSADTTIRLWSTKLNAN 452
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 63.3 bits (147), Expect = 1e-10
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +1
Query: 262 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL 441
N +SGS+D+T+R+W++ GK R + H+ + SV F+ D IVS S D + K+W+
Sbjct: 141 NLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAK 200
Query: 442 -AECKYTIQDDGHSDWVSCVRFSP 510
C T+ DD S VS +FSP
Sbjct: 201 EGTCLKTLIDD-KSPAVSFAKFSP 223
Score = 60.1 bits (139), Expect = 1e-09
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
DGN S S DKT+ LW R+E H+ + +A+S D+ S S D T+++W+
Sbjct: 54 DGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWD 113
Query: 436 TLA--ECKYTIQDDGHSDWVSCVRFSP 510
+ EC ++ GH+++V CV F+P
Sbjct: 114 ARSPYECLKVLR--GHTNFVFCVNFNP 138
Score = 50.8 bits (116), Expect = 7e-07
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Frame = +1
Query: 247 AVYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQIVSGSR-DKT 420
+V +G Y +SGS D + LWDL A +R E HT V+SV+ V N SG+ DKT
Sbjct: 266 SVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKT 325
Query: 421 IKLW 432
I++W
Sbjct: 326 IRIW 329
Score = 50.4 bits (115), Expect = 1e-06
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSV--AFSVDN-RQIVSGSRDKTIK 426
+G + L + D TL+L + A GK + + HT V + AFSV N + IVSGS D +
Sbjct: 224 NGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVY 283
Query: 427 LWNTLAECKYTIQDDGHSDWVSCVRFSPI 513
LW+ A + +GH+D V V P+
Sbjct: 284 LWDLQAR-NILQRLEGHTDAVISVSCHPV 311
Score = 48.8 bits (111), Expect = 3e-06
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 432
D +Y S S D TLR+WD + + + HT V V F+ + IVSGS D+TI++W
Sbjct: 96 DSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIW 155
Query: 433 NT-LAECKYTIQDDGHSDWVSCVRFS 507
+C I+ HS +S V F+
Sbjct: 156 EVKTGKCVRMIK--AHSMPISSVHFN 179
Score = 41.1 bits (92), Expect = 6e-04
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQIVSGSRDKTIKLW 432
DG+ +S S D + ++WD G + D +S A FS + + I+ + D T+KL
Sbjct: 181 DGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLS 240
Query: 433 NTLAECKYTIQDDGHSDWVSCVRFSPIMPTPLLYPVVGTE 552
N A K+ GH++ V C+ S T Y V G+E
Sbjct: 241 N-YATGKFLKVYTGHTNKVFCIT-SAFSVTNGKYIVSGSE 278
Score = 35.1 bits (77), Expect = 0.040
Identities = 30/97 (30%), Positives = 47/97 (48%)
Frame = +2
Query: 65 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 244
TL GH ++ + + +++ S+S DKT+I+W T NY + R GHS ISD+
Sbjct: 38 TLEGHTAAISCVKFSND-GNLLASASVDKTMILWSAT----NYSLIH-RYEGHSSGISDL 91
Query: 245 VLSMTVITHFPVLGTRLCVCGISLQARLPDDSRTILR 355
S +H+ + C I AR P + +LR
Sbjct: 92 AWSSD--SHYTCSASDDCTLRI-WDARSPYECLKVLR 125
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +1
Query: 331 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFS 507
+ E HT + V FS D + S S DKT+ LW+ + +GHS +S + +S
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSA-TNYSLIHRYEGHSSGISDLAWS 94
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 61.7 bits (143), Expect = 4e-10
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +1
Query: 262 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT- 438
N +SGS+D+T+R+WD+ GK + H+ V +V F+ D IVS S D ++W++
Sbjct: 126 NMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSG 185
Query: 439 LAECKYTIQDDGHSDWVSCVRFSP 510
C T+ DD + VS VRFSP
Sbjct: 186 TGHCVKTLIDDENPP-VSFVRFSP 208
Score = 60.1 bits (139), Expect = 1e-09
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
D + +S S DKTL+LWD+ G + HT V F+ + IVSGS D+T+++W+
Sbjct: 82 DARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWD 141
Query: 436 -TLAECKYTIQDDGHSDWVSCVRFS 507
T +C + HSD V+ V F+
Sbjct: 142 VTTGKCLKVL--PAHSDPVTAVDFN 164
Score = 54.0 bits (124), Expect = 8e-08
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAA-----GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 420
DG S S DKT+R + + + + F H + VAFS D R IVS S DKT
Sbjct: 35 DGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFIVSASDDKT 94
Query: 421 IKLWNTLAECKYTIQD-DGHSDWVSCVRFSP 510
+KLW+ E I+ GH+++ CV F+P
Sbjct: 95 LKLWD--VETGSLIKTLIGHTNYAFCVNFNP 123
Score = 53.2 bits (122), Expect = 1e-07
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDH--TKDVLSVAFSVDN-RQIVSGSRDKTIK 426
+G + L G+ D TLRLW++++ K + + H + +S AFSV N ++IVSGS D +
Sbjct: 209 NGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVH 268
Query: 427 LWNTLAECKYTIQDDGHSDWVSCVRFSP 510
+W L K + +GH++ V V P
Sbjct: 269 MWE-LNSKKLLQKLEGHTETVMNVACHP 295
Score = 53.2 bits (122), Expect = 1e-07
Identities = 24/67 (35%), Positives = 39/67 (58%)
Frame = +1
Query: 247 AVYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 426
+V +G +SGS D + +W+L + K ++ E HT+ V++VA I SGS DKT++
Sbjct: 251 SVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVR 310
Query: 427 LWNTLAE 447
+W E
Sbjct: 311 IWTQKKE 317
Score = 48.4 bits (110), Expect = 4e-06
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRR-FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 432
DG+ +S S+D R+WD G + +D V V FS + + I+ G+ D T++LW
Sbjct: 166 DGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLW 225
Query: 433 NTLAECKYTIQDDGHSDWVSCV 498
N ++ K+ GH + C+
Sbjct: 226 N-ISSAKFLKTYTGHVNAQYCI 246
Score = 31.5 bits (68), Expect = 0.49
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +2
Query: 44 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 175
ET L TL GH + + NP+ +MI+S S D+T+ +W +T
Sbjct: 101 ETGSLIKTLIGHTNYAFCVNFNPQ-SNMIVSGSFDETVRIWDVT 143
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +2
Query: 65 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 244
TL HN V+ + + ++ S+S DKT+ + + + P + GH + ISDV
Sbjct: 19 TLTSHNRAVSSVKFSSD-GRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77
Query: 245 VLS 253
S
Sbjct: 78 AFS 80
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 58.8 bits (136), Expect = 3e-09
Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +1
Query: 274 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL-AEC 450
S SWD T+RLWD+ A K T H DVL+VAF D +Q+ S + D I W+T+
Sbjct: 494 SSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVL 553
Query: 451 KYTIQ 465
YTI+
Sbjct: 554 MYTIE 558
Score = 45.2 bits (102), Expect = 4e-05
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +1
Query: 244 CAVY--DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 417
C Y D +G+ D +++W++ +G F +HT V ++ F DN ++S S D
Sbjct: 354 CVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDG 413
Query: 418 TIKLWN 435
T++ W+
Sbjct: 414 TVRAWD 419
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 58.8 bits (136), Expect = 3e-09
Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +1
Query: 274 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL-AEC 450
S SWD T+RLWD+ A K T H DVL+VAF D +Q+ S + D I W+T+
Sbjct: 534 SSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVL 593
Query: 451 KYTIQ 465
YTI+
Sbjct: 594 MYTIE 598
Score = 45.2 bits (102), Expect = 4e-05
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +1
Query: 244 CAVY--DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 417
C Y D +G+ D +++W++ +G F +HT V ++ F DN ++S S D
Sbjct: 394 CVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDG 453
Query: 418 TIKLWN 435
T++ W+
Sbjct: 454 TVRAWD 459
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice sites
at introns 4 and 6
Length = 1017
Score = 56.8 bits (131), Expect = 1e-08
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = +1
Query: 241 CCAVYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDK 417
C Y NY S +D ++LWD+ G+ F +H K SV FS ++ SGS D
Sbjct: 760 CWNNYIRNYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDC 819
Query: 418 TIKLWN-TLAECKYTIQDDGHSDWVSCVRFSP 510
++KLWN C TI++ + V CV+FSP
Sbjct: 820 SVKLWNINERNCLGTIRNIAN---VCCVQFSP 848
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +1
Query: 241 CCAVYD--GNYALS-GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 411
CC + ++ L+ GS D +DL +T +S A +DN +V+ S
Sbjct: 842 CCVQFSPQSSHLLAFGSSDFRTYCYDLRNLRTPWCILSGHNKAVSYAKFLDNETLVTAST 901
Query: 412 DKTIKLWN 435
D T+KLW+
Sbjct: 902 DNTLKLWD 909
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 56.0 bits (129), Expect = 2e-08
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +1
Query: 271 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAE 447
++ S DKT+++W ++ G + FE HT VL +F D Q VS D +KLWN +E
Sbjct: 557 MTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSE 616
Query: 448 CKYTIQDDGHSDWV 489
C T D H D V
Sbjct: 617 CIATY--DQHEDKV 628
Score = 50.4 bits (115), Expect = 1e-06
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Frame = +1
Query: 262 NYALSGSWDKTLRLWDLAAGKTTRR----FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 429
N +SGS D T+R+WDL A T ++ E H V S+A S D + S RDK + L
Sbjct: 159 NILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNL 218
Query: 430 WNTL-AECKYTI 462
W+ CK T+
Sbjct: 219 WDLHDYSCKATV 230
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = +1
Query: 244 CAVYDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSGSRDK 417
C GN + +GS DKT+RLW+ + H D+L+VAF+ + VSGS D+
Sbjct: 410 CVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDR 469
Query: 418 TIKLWN 435
T+K+W+
Sbjct: 470 TLKVWS 475
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Frame = +1
Query: 262 NYALSGSWDKTLRLWDLAAG----------KTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 411
++ +SGS D+TL++W L KT H KD+ SVA + ++ + +GS
Sbjct: 460 SFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSE 519
Query: 412 DKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPI 513
D+T +W L + + + GH + V FS +
Sbjct: 520 DRTASIWR-LPDLVHVVTLKGHKRRIFSVEFSTV 552
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +1
Query: 274 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 432
+GS D+T +W L + H + + SV FS ++ +++ S DKT+K+W
Sbjct: 516 TGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIW 568
Score = 36.7 bits (81), Expect = 0.013
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = +1
Query: 295 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVD---NRQIVSGSRDKTIKLWNTLAECKYTIQ 465
+R++D+A + H + VLS+ V N IV+GS+DKT++LWN ++ +
Sbjct: 383 VRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGV- 441
Query: 466 DDGHSDWVSCVRFS 507
GH+ + V F+
Sbjct: 442 GTGHNGDILAVAFA 455
Score = 35.5 bits (78), Expect = 0.030
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +1
Query: 250 VYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 429
+ DG +S D L+LW++ + ++ H V ++A I +G D I L
Sbjct: 592 ITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINL 651
Query: 430 WN 435
W+
Sbjct: 652 WH 653
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 62 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 172
G GHNG + +A K +S S D+TL VW L
Sbjct: 440 GVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSL 476
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 56.0 bits (129), Expect = 2e-08
Identities = 27/85 (31%), Positives = 43/85 (50%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
DG + +SG D +++WDL AGK F+ H + S+ F + +GS DKT+K W+
Sbjct: 247 DGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWD 306
Query: 436 TLAECKYTIQDDGHSDWVSCVRFSP 510
L + + V C+ F+P
Sbjct: 307 -LETFELIGSGGTETTGVRCLTFNP 330
Score = 52.4 bits (120), Expect = 2e-07
Identities = 26/84 (30%), Positives = 41/84 (48%)
Frame = +1
Query: 259 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 438
G + SGS D L++WD+ ++ HT+ V + F+ D R IVSG D +K+W+
Sbjct: 206 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWD- 264
Query: 439 LAECKYTIQDDGHSDWVSCVRFSP 510
L K + H + + F P
Sbjct: 265 LTAGKLLHEFKSHEGKIQSLDFHP 288
Score = 49.2 bits (112), Expect = 2e-06
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 274 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-C 450
+G+ T++LWDL K R H + +SV F SGS D +K+W+ + C
Sbjct: 169 AGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGC 228
Query: 451 KYTIQDDGHSDWVSCVRFSP 510
+T + GH+ V+ +RF+P
Sbjct: 229 IHTYK--GHTRGVNVLRFTP 246
Score = 37.5 bits (83), Expect = 0.007
Identities = 22/80 (27%), Positives = 32/80 (40%)
Frame = +1
Query: 271 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 450
++G D + LW + H+ + SV F + +G+ TIKLW+ L E
Sbjct: 126 VTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWD-LEEA 184
Query: 451 KYTIQDDGHSDWVSCVRFSP 510
K GH V F P
Sbjct: 185 KVVRTLTGHRSNCVSVNFHP 204
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/54 (25%), Positives = 30/54 (55%)
Frame = +1
Query: 274 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
+GS DKT++ WDL + T V + F+ D + ++ G ++ ++K+++
Sbjct: 295 TGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVLCGLQE-SLKIFS 347
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 54.8 bits (126), Expect = 5e-08
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Frame = +1
Query: 214 IRSFALHF*CCAVYD----GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 381
+R+F H C+ + G + SGS D LR+WD + ++ HT+ + ++ FS
Sbjct: 42 VRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSP 101
Query: 382 DNRQIVSGSRDKTIKLWNTLA 444
D R +VSG D +K+W+ A
Sbjct: 102 DGRWVVSGGLDNVVKVWDLTA 122
Score = 51.6 bits (118), Expect = 4e-07
Identities = 21/60 (35%), Positives = 34/60 (56%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
DG + +SG D +++WDL AGK F+ H + S+ F + +GS D+T+K W+
Sbjct: 102 DGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWD 161
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 271 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE- 447
L+G+ ++LWDL K R F H + +V F + SGS D +++W+T +
Sbjct: 23 LAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKG 82
Query: 448 CKYTIQDDGHSDWVSCVRFSP 510
C T + GH+ +S + FSP
Sbjct: 83 CIQTYK--GHTRGISTIEFSP 101
Score = 36.3 bits (80), Expect = 0.017
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +1
Query: 346 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 510
HT V SVAF+ + +++G+ IKLW+ L E K GH S V F P
Sbjct: 6 HTSPVDSVAFNSEEVLVLAGASSGVIKLWD-LEESKMVRAFTGHRSNCSAVEFHP 59
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +1
Query: 274 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRD 414
+GS D+T++ WDL + V ++AF D + + G D
Sbjct: 150 TGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCGLDD 196
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 54.4 bits (125), Expect = 6e-08
Identities = 26/85 (30%), Positives = 43/85 (50%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
DG + +SG D +++WDL AGK F+ H + S+ F + +GS D+T+K W+
Sbjct: 154 DGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWD 213
Query: 436 TLAECKYTIQDDGHSDWVSCVRFSP 510
L + + V C+ F+P
Sbjct: 214 -LETFELIGSGGPETAGVRCLSFNP 237
Score = 52.8 bits (121), Expect = 2e-07
Identities = 25/84 (29%), Positives = 41/84 (48%)
Frame = +1
Query: 259 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 438
G + SGS D L++WD+ ++ HT+ V + F+ D R +VSG D +K+W+
Sbjct: 113 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWD- 171
Query: 439 LAECKYTIQDDGHSDWVSCVRFSP 510
L K + H + + F P
Sbjct: 172 LTAGKLLTEFKSHEGQIQSLDFHP 195
Score = 49.2 bits (112), Expect = 2e-06
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 274 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-C 450
+G+ T++LWDL K R H + +SV F SGS D +K+W+ + C
Sbjct: 76 AGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGC 135
Query: 451 KYTIQDDGHSDWVSCVRFSP 510
+T + GH+ V+ +RF+P
Sbjct: 136 IHTYK--GHTRGVNVLRFTP 153
Score = 36.3 bits (80), Expect = 0.017
Identities = 22/80 (27%), Positives = 32/80 (40%)
Frame = +1
Query: 271 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 450
++G D + LW + H+ + SV F + +G+ TIKLW+ L E
Sbjct: 33 VTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWD-LEEA 91
Query: 451 KYTIQDDGHSDWVSCVRFSP 510
K GH V F P
Sbjct: 92 KIVRTLTGHRSNCISVDFHP 111
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/54 (24%), Positives = 31/54 (57%)
Frame = +1
Query: 274 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
+GS D+T++ WDL + T V ++F+ D + ++ G ++ ++K+++
Sbjct: 202 TGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQE-SLKIFS 254
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 54.4 bits (125), Expect = 6e-08
Identities = 26/85 (30%), Positives = 43/85 (50%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
DG + +SG D +++WDL AGK F+ H + S+ F + +GS D+T+K W+
Sbjct: 154 DGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWD 213
Query: 436 TLAECKYTIQDDGHSDWVSCVRFSP 510
L + + V C+ F+P
Sbjct: 214 -LETFELIGSGGPETAGVRCLSFNP 237
Score = 52.8 bits (121), Expect = 2e-07
Identities = 25/84 (29%), Positives = 41/84 (48%)
Frame = +1
Query: 259 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 438
G + SGS D L++WD+ ++ HT+ V + F+ D R +VSG D +K+W+
Sbjct: 113 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWD- 171
Query: 439 LAECKYTIQDDGHSDWVSCVRFSP 510
L K + H + + F P
Sbjct: 172 LTAGKLLTEFKSHEGQIQSLDFHP 195
Score = 49.2 bits (112), Expect = 2e-06
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 274 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-C 450
+G+ T++LWDL K R H + +SV F SGS D +K+W+ + C
Sbjct: 76 AGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGC 135
Query: 451 KYTIQDDGHSDWVSCVRFSP 510
+T + GH+ V+ +RF+P
Sbjct: 136 IHTYK--GHTRGVNVLRFTP 153
Score = 36.3 bits (80), Expect = 0.017
Identities = 22/80 (27%), Positives = 32/80 (40%)
Frame = +1
Query: 271 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 450
++G D + LW + H+ + SV F + +G+ TIKLW+ L E
Sbjct: 33 VTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWD-LEEA 91
Query: 451 KYTIQDDGHSDWVSCVRFSP 510
K GH V F P
Sbjct: 92 KIVRTLTGHRSNCISVDFHP 111
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/54 (24%), Positives = 31/54 (57%)
Frame = +1
Query: 274 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
+GS D+T++ WDL + T V ++F+ D + ++ G ++ ++K+++
Sbjct: 202 TGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQE-SLKIFS 254
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 54.4 bits (125), Expect = 6e-08
Identities = 36/98 (36%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Frame = +1
Query: 241 CCAVYDGNYA--LSGSWDKTLRLWDLAAGKTTRRF-----EDHTKDVLSVAFSVDNRQ-I 396
CC A ++ S D+T LWD+ G T F HT DVLSV+ S N
Sbjct: 161 CCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWF 220
Query: 397 VSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 510
+SGS D T +LW+T A + GH V+ V+F P
Sbjct: 221 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFP 258
Score = 33.1 bits (72), Expect = 0.16
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +1
Query: 331 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 510
R + HT V S+ ++ + +IVS S+D + +WN L K T WV FSP
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQK-THAIKLPCAWVMTCAFSP 117
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +1
Query: 262 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW--N 435
N +S S D L +W+ + T + V++ AFS + + + G D ++ +
Sbjct: 78 NRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSLS 137
Query: 436 TLAECKYTIQDD----GHSDWVSCVRFSP 510
+ A+ T+ GH +VSC ++ P
Sbjct: 138 STADKDGTVPVSRMLTGHRGYVSCCQYVP 166
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 47 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 175
T+ + L GH G+V+ P +++SS D+T I+W +T
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVT 187
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 54.4 bits (125), Expect = 6e-08
Identities = 36/98 (36%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Frame = +1
Query: 241 CCAVYDGNYA--LSGSWDKTLRLWDLAAGKTTRRF-----EDHTKDVLSVAFSVDNRQ-I 396
CC A ++ S D+T LWD+ G T F HT DVLSV+ S N
Sbjct: 99 CCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWF 158
Query: 397 VSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 510
+SGS D T +LW+T A + GH V+ V+F P
Sbjct: 159 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFP 196
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +1
Query: 262 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW--N 435
N +S S D L +W+ + T + V++ AFS + + + G D ++ +
Sbjct: 16 NRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSLS 75
Query: 436 TLAECKYTIQDD----GHSDWVSCVRFSP 510
+ A+ T+ GH +VSC ++ P
Sbjct: 76 STADKDGTVPVSRMLTGHRGYVSCCQYVP 104
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 47 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 175
T+ + L GH G+V+ P +++SS D+T I+W +T
Sbjct: 83 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVT 125
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 54.4 bits (125), Expect = 6e-08
Identities = 36/98 (36%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Frame = +1
Query: 241 CCAVYDGNYA--LSGSWDKTLRLWDLAAGKTTRRF-----EDHTKDVLSVAFSVDNRQ-I 396
CC A ++ S D+T LWD+ G T F HT DVLSV+ S N
Sbjct: 161 CCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWF 220
Query: 397 VSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 510
+SGS D T +LW+T A + GH V+ V+F P
Sbjct: 221 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFP 258
Score = 33.1 bits (72), Expect = 0.16
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +1
Query: 331 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 510
R + HT V S+ ++ + +IVS S+D + +WN L K T WV FSP
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQK-THAIKLPCAWVMTCAFSP 117
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +1
Query: 262 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW--N 435
N +S S D L +W+ + T + V++ AFS + + + G D ++ +
Sbjct: 78 NRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSLS 137
Query: 436 TLAECKYTIQDD----GHSDWVSCVRFSP 510
+ A+ T+ GH +VSC ++ P
Sbjct: 138 STADKDGTVPVSRMLTGHRGYVSCCQYVP 166
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 47 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 175
T+ + L GH G+V+ P +++SS D+T I+W +T
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVT 187
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/54 (44%), Positives = 33/54 (61%)
Frame = +1
Query: 274 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
S S+D T++LWD GK F H + V S+AFS + I SGS DK+I +W+
Sbjct: 516 SASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWS 569
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/84 (32%), Positives = 44/84 (52%)
Frame = +1
Query: 259 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 438
G+Y L+GS D+T +WD+ A + ++FE H+ L V + +N + S D I L
Sbjct: 377 GDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWR-NNVSFATSSTDSMIYLCK- 434
Query: 439 LAECKYTIQDDGHSDWVSCVRFSP 510
+ E + GH V+CV++ P
Sbjct: 435 IGETRPAKTFTGHQGEVNCVKWDP 458
Score = 39.9 bits (89), Expect = 0.001
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Frame = +1
Query: 244 CAVYD--GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV-------DNRQ- 393
C +D G+ S S D T ++W++ +HTK++ ++ +S N+Q
Sbjct: 453 CVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQL 512
Query: 394 -IVSGSRDKTIKLWNTLAEC-KYTIQDDGHSDWVSCVRFSP 510
+ S S D T+KLW+ AE K +GH + V + FSP
Sbjct: 513 TLASASFDSTVKLWD--AELGKMLCSFNGHREPVYSLAFSP 551
Score = 36.3 bits (80), Expect = 0.017
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
+G +GS D R+W L G+ H + S+ ++ +++GS D+T +W+
Sbjct: 335 EGTLLATGSCDGQARIWTLN-GELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWD 393
Query: 436 TLAECKYTIQDDGHS------DWVSCVRFSPIMPTPLLY 534
AE ++ Q + HS DW + V F+ ++Y
Sbjct: 394 VKAE-EWKQQFEFHSGPTLDVDWRNNVSFATSSTDSMIY 431
Score = 31.9 bits (69), Expect = 0.37
Identities = 13/56 (23%), Positives = 29/56 (51%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 423
+G Y SGS DK++ +W + GK + + + + V ++ + +I + D ++
Sbjct: 552 NGEYIASGSLDKSIHIWSIKEGKIVKTYTGN-GGIFEVCWNKEGNKIAACFADNSV 606
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 331 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
R E HT +V + A+S + SGS D T ++W+
Sbjct: 259 RILEGHTSEVCACAWSPSASLLASGSGDATARIWS 293
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 53 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 184
+L TL H G + + N K D +L+ S D+T +VW + +E
Sbjct: 356 ELISTLSKHKGPIFSLKWNKK-GDYLLTGSVDRTAVVWDVKAEE 398
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
DG A S D R+WDL G++ F+ H K V SV FS + + SG D ++W+
Sbjct: 392 DGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWD 451
Query: 436 -TLAECKYTIQDDGHSDWVSCVRFSP 510
+ + Y I H++ VS V++ P
Sbjct: 452 LRMRKSLYII--PAHANLVSQVKYEP 475
Score = 48.8 bits (111), Expect = 3e-06
Identities = 28/84 (33%), Positives = 39/84 (46%)
Frame = +1
Query: 259 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 438
G Y + S+DKT RLWD+ G E H++ V +AF D S D ++W+
Sbjct: 351 GKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWD- 409
Query: 439 LAECKYTIQDDGHSDWVSCVRFSP 510
L + + GH V V FSP
Sbjct: 410 LRTGRSILVFQGHIKPVFSVNFSP 433
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Frame = +1
Query: 241 CCAVYDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 417
C DG + S +LW++ T +DH + V FS + + + S D+
Sbjct: 261 CSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADR 320
Query: 418 TIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 510
T KLW T T +GH D ++ V F P
Sbjct: 321 TAKLWKTDGTLLQTF--EGHLDRLARVAFHP 349
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/77 (31%), Positives = 38/77 (49%)
Frame = +1
Query: 274 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 453
+ S D+T +LW G + FE H + VAF + + + S DKT +LW+ +
Sbjct: 315 TASADRTAKLWK-TDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAE 373
Query: 454 YTIQDDGHSDWVSCVRF 504
+Q +GHS V + F
Sbjct: 374 LLLQ-EGHSRSVYGIAF 389
Score = 36.3 bits (80), Expect = 0.017
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
+G + + S+D + +W + H V S+ + D+ I + S D+TIKLW
Sbjct: 477 EGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWT 536
Query: 436 T 438
+
Sbjct: 537 S 537
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 53.2 bits (122), Expect = 1e-07
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 1/125 (0%)
Frame = +1
Query: 139 LSRQNSHRVEADQRRKQLRYTSKAFIRSFALHF*CCAV-YDGNYALSGSWDKTLRLWDLA 315
L R +S E K + + IR A CC+ YDG S DK + +W++
Sbjct: 482 LKRNSSVHTETS---KPFSFNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNME 538
Query: 316 AGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSC 495
+ E+H + V F ++ Q+ + S DKTIK+W+ + GH+ V
Sbjct: 539 TLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMS 598
Query: 496 VRFSP 510
+ F P
Sbjct: 599 IDFHP 603
Score = 30.3 bits (65), Expect = 1.1
Identities = 23/89 (25%), Positives = 37/89 (41%)
Frame = +1
Query: 244 CAVYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 423
C +G S S D ++LW L++G + SV F ++ + I
Sbjct: 682 CWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAI 740
Query: 424 KLWNTLAECKYTIQDDGHSDWVSCVRFSP 510
+LWNT+ T+ GH +S + SP
Sbjct: 741 ELWNTMENKCMTVA--GHECVISALAQSP 767
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 53.2 bits (122), Expect = 1e-07
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 1/125 (0%)
Frame = +1
Query: 139 LSRQNSHRVEADQRRKQLRYTSKAFIRSFALHF*CCAV-YDGNYALSGSWDKTLRLWDLA 315
L R +S E K + + IR A CC+ YDG S DK + +W++
Sbjct: 484 LKRNSSVHTETS---KPFSFNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNME 540
Query: 316 AGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSC 495
+ E+H + V F ++ Q+ + S DKTIK+W+ + GH+ V
Sbjct: 541 TLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMS 600
Query: 496 VRFSP 510
+ F P
Sbjct: 601 IDFHP 605
Score = 30.3 bits (65), Expect = 1.1
Identities = 23/89 (25%), Positives = 37/89 (41%)
Frame = +1
Query: 244 CAVYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 423
C +G S S D ++LW L++G + SV F ++ + I
Sbjct: 684 CWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAI 742
Query: 424 KLWNTLAECKYTIQDDGHSDWVSCVRFSP 510
+LWNT+ T+ GH +S + SP
Sbjct: 743 ELWNTMENKCMTVA--GHECVISALAQSP 769
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 53.2 bits (122), Expect = 1e-07
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 1/125 (0%)
Frame = +1
Query: 139 LSRQNSHRVEADQRRKQLRYTSKAFIRSFALHF*CCAV-YDGNYALSGSWDKTLRLWDLA 315
L R +S E K + + IR A CC+ YDG S DK + +W++
Sbjct: 484 LKRNSSVHTETS---KPFSFNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNME 540
Query: 316 AGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSC 495
+ E+H + V F ++ Q+ + S DKTIK+W+ + GH+ V
Sbjct: 541 TLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMS 600
Query: 496 VRFSP 510
+ F P
Sbjct: 601 IDFHP 605
Score = 30.3 bits (65), Expect = 1.1
Identities = 23/89 (25%), Positives = 37/89 (41%)
Frame = +1
Query: 244 CAVYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 423
C +G S S D ++LW L++G + SV F ++ + I
Sbjct: 684 CWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAI 742
Query: 424 KLWNTLAECKYTIQDDGHSDWVSCVRFSP 510
+LWNT+ T+ GH +S + SP
Sbjct: 743 ELWNTMENKCMTVA--GHECVISALAQSP 769
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 53.2 bits (122), Expect = 1e-07
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 1/125 (0%)
Frame = +1
Query: 139 LSRQNSHRVEADQRRKQLRYTSKAFIRSFALHF*CCAV-YDGNYALSGSWDKTLRLWDLA 315
L R +S E K + + IR A CC+ YDG S DK + +W++
Sbjct: 484 LKRNSSVHTETS---KPFSFNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNME 540
Query: 316 AGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSC 495
+ E+H + V F ++ Q+ + S DKTIK+W+ + GH+ V
Sbjct: 541 TLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMS 600
Query: 496 VRFSP 510
+ F P
Sbjct: 601 IDFHP 605
Score = 30.3 bits (65), Expect = 1.1
Identities = 23/89 (25%), Positives = 37/89 (41%)
Frame = +1
Query: 244 CAVYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 423
C +G S S D ++LW L++G + SV F ++ + I
Sbjct: 684 CWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAI 742
Query: 424 KLWNTLAECKYTIQDDGHSDWVSCVRFSP 510
+LWNT+ T+ GH +S + SP
Sbjct: 743 ELWNTMENKCMTVA--GHECVISALAQSP 769
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 53.2 bits (122), Expect = 1e-07
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 1/125 (0%)
Frame = +1
Query: 139 LSRQNSHRVEADQRRKQLRYTSKAFIRSFALHF*CCAV-YDGNYALSGSWDKTLRLWDLA 315
L R +S E K + + IR A CC+ YDG S DK + +W++
Sbjct: 484 LKRNSSVHTETS---KPFSFNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNME 540
Query: 316 AGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSC 495
+ E+H + V F ++ Q+ + S DKTIK+W+ + GH+ V
Sbjct: 541 TLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMS 600
Query: 496 VRFSP 510
+ F P
Sbjct: 601 IDFHP 605
Score = 30.3 bits (65), Expect = 1.1
Identities = 23/89 (25%), Positives = 37/89 (41%)
Frame = +1
Query: 244 CAVYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 423
C +G S S D ++LW L++G + SV F ++ + I
Sbjct: 684 CWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAI 742
Query: 424 KLWNTLAECKYTIQDDGHSDWVSCVRFSP 510
+LWNT+ T+ GH +S + SP
Sbjct: 743 ELWNTMENKCMTVA--GHECVISALAQSP 769
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 52.4 bits (120), Expect = 2e-07
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
DG+ LS S+D+T R+ L +GK + F HT V F+ D +I++ S D T+K+W+
Sbjct: 316 DGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWD 375
Query: 436 T-LAECKYTIQ 465
+ +C T +
Sbjct: 376 SKTTDCLQTFK 386
Score = 50.8 bits (116), Expect = 7e-07
Identities = 27/84 (32%), Positives = 47/84 (55%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
D SGS D +++W + G RRF+ H++ V S++FS D Q++S S D+T ++ +
Sbjct: 274 DSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARI-H 332
Query: 436 TLAECKYTIQDDGHSDWVSCVRFS 507
L K + GH+ +V+ F+
Sbjct: 333 GLKSGKLLKEFRGHTSYVNHAIFT 356
Score = 44.4 bits (100), Expect = 6e-05
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTR--------RFEDHTKDVLSVAFSVDNRQIVSGSR 411
DG + S S D + +WD +GK + F H VL + FS D+ + SGS+
Sbjct: 224 DGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLASGSQ 283
Query: 412 DKTIKLWNTLAECKYTIQDDGHSDWVSCVRFS 507
D IK+W + + D HS V+ + FS
Sbjct: 284 DGKIKIWR-IRTGVCIRRFDAHSQGVTSLSFS 314
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/63 (25%), Positives = 26/63 (41%)
Frame = +1
Query: 244 CAVYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 423
C G++ DK L ++ +G H KDV+ + + + S D T+
Sbjct: 447 CVSTKGDWIYCIGEDKKLYCFNYQSGGLEHFMMVHEKDVIGITHHPHRNLLATYSEDCTM 506
Query: 424 KLW 432
KLW
Sbjct: 507 KLW 509
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 52.4 bits (120), Expect = 2e-07
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Frame = +1
Query: 214 IRSFALHF*CCAVYD----GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 381
+R+F H C+ + G + SGS D L++WD+ + ++ H++ + ++ F+
Sbjct: 93 VRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTP 152
Query: 382 DNRQIVSGSRDKTIKLWNTLA 444
D R +VSG D +K+W+ A
Sbjct: 153 DGRWVVSGGLDNVVKVWDLTA 173
Score = 51.6 bits (118), Expect = 4e-07
Identities = 21/60 (35%), Positives = 34/60 (56%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
DG + +SG D +++WDL AGK F+ H + S+ F + +GS D+T+K W+
Sbjct: 153 DGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWD 212
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 271 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE- 447
L+G+ ++LWD+ K R F H + +V F + SGS D +K+W+ +
Sbjct: 74 LAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKG 133
Query: 448 CKYTIQDDGHSDWVSCVRFSP 510
C T + GHS +S +RF+P
Sbjct: 134 CIQTYK--GHSRGISTIRFTP 152
Score = 38.3 bits (85), Expect = 0.004
Identities = 24/80 (30%), Positives = 35/80 (43%)
Frame = +1
Query: 271 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 450
++G D + LW + + HT V SVAF +++G+ IKLW+ + E
Sbjct: 32 ITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWD-VEEA 90
Query: 451 KYTIQDDGHSDWVSCVRFSP 510
K GH S V F P
Sbjct: 91 KMVRAFTGHRSNCSAVEFHP 110
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +1
Query: 274 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
+GS D+T++ WDL + V S+ F D R + G D ++K+++
Sbjct: 201 TGSADRTVKFWDLETFELIGSTRPEATGVRSIKFHPDGRTLFCG-LDDSLKVYS 253
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 51.6 bits (118), Expect = 4e-07
Identities = 20/62 (32%), Positives = 38/62 (61%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
+G Y + G + LW++A GK +++ H + V + FS D+ +VSGS+D +I++W+
Sbjct: 89 EGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWS 148
Query: 436 TL 441
+
Sbjct: 149 LI 150
Score = 35.5 bits (78), Expect = 0.030
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 15/79 (18%)
Frame = +1
Query: 244 CAVYDGNYAL--SGSWDKTLRLWDLAA---------GKTT--RRFEDHTKDVLSVAFSVD 384
C V+ G+ +L SGS D ++R+W L G T F +HT V +
Sbjct: 125 CLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVIDYG 184
Query: 385 --NRQIVSGSRDKTIKLWN 435
N I+S S D+T K+W+
Sbjct: 185 GCNAVIISSSEDRTCKVWS 203
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 51.2 bits (117), Expect = 6e-07
Identities = 22/59 (37%), Positives = 41/59 (69%)
Frame = +1
Query: 337 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPI 513
F+ H DVL +A+S ++ ++S S DKT++LWN ++ ++ HSD+V+C++F+P+
Sbjct: 509 FQGHVDDVLDLAWS-KSQHLLSSSMDKTVRLWNLSSQT--CLKVFSHSDYVTCIQFNPV 564
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/58 (37%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = +1
Query: 265 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 435
+ LS S DKT+RLW+L++ +T + H+ V + F+ VD+R +SGS D +++W+
Sbjct: 526 HLLSSSMDKTVRLWNLSS-QTCLKVFSHSDYVTCIQFNPVDDRYFISGSLDAKVRVWS 582
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/60 (23%), Positives = 32/60 (53%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
D Y +SGS D +R+W + + ++ H + V S ++ D + ++ GS + ++++
Sbjct: 565 DDRYFISGSLDAKVRVWSIPDRQVVDWYDLH-EMVTSACYTPDGQGVLVGSYKGSCRMYS 623
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 51.2 bits (117), Expect = 6e-07
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Frame = +1
Query: 244 CAVYD--GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 417
CA++D G Y ++GS D+ +++W + H D+ +A S +N + S S D
Sbjct: 310 CAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNALVASASNDF 369
Query: 418 TIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 510
I++W ++ GH+ V+ + FSP
Sbjct: 370 VIRVWRLPDGMPISVL-RGHTGAVTAIAFSP 399
Score = 32.7 bits (71), Expect = 0.21
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +2
Query: 68 LRGHNGWVTQIATNPKYPDM--ILSSSRDKTLIVW 166
LRGH G VT IA +P+ + +LSSS D T +W
Sbjct: 385 LRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIW 419
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 51.2 bits (117), Expect = 6e-07
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Frame = +1
Query: 271 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
+SG DK +R+WD GK ++ ++ H KD+ S+ + D+ ++GS DKT KLW+
Sbjct: 164 VSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 35.9 bits (79), Expect = 0.023
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
+G+ S + D T LW G+ + H V S D+ ++++GS D+T KLW+
Sbjct: 21 EGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWD 80
Score = 34.3 bits (75), Expect = 0.069
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 241 CCAVY-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 399
CC V D + ++GS D+T +LWD+ +GK F+ SV F+V +R V
Sbjct: 57 CCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFK-FNAPTRSVDFAVGDRLAV 109
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 244 CAVYDGNYALSGSWDKTLRLWDL 312
C D ++ L+GS DKT +LWD+
Sbjct: 200 CKAADDSHFLTGSLDKTAKLWDM 222
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 51.2 bits (117), Expect = 6e-07
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Frame = +1
Query: 271 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
+SG DK +R+WD GK ++ ++ H KD+ S+ + D+ ++GS DKT KLW+
Sbjct: 164 VSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 35.9 bits (79), Expect = 0.023
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
+G+ S + D T LW G+ + H V S D+ ++++GS D+T KLW+
Sbjct: 21 EGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWD 80
Score = 34.3 bits (75), Expect = 0.069
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 241 CCAVY-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 399
CC V D + ++GS D+T +LWD+ +GK F+ SV F+V +R V
Sbjct: 57 CCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFK-FNAPTRSVDFAVGDRLAV 109
Score = 30.7 bits (66), Expect = 0.85
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +1
Query: 244 CAVYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD---NRQIVSGSRD 414
C D ++ L+GS DKT +LWD+ +T + +T V A S+ N ++ G +D
Sbjct: 200 CKAADDSHFLTGSLDKTAKLWDM---RTLTLLKTYTTVVPVNAVSLSPLLNHVVLGGGQD 256
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 51.2 bits (117), Expect = 6e-07
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Frame = +1
Query: 271 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
+SG DK +R+WD GK ++ ++ H KD+ S+ + D+ ++GS DKT KLW+
Sbjct: 164 VSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 35.9 bits (79), Expect = 0.023
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
+G+ S + D T LW G+ + H V S D+ ++++GS D+T KLW+
Sbjct: 21 EGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWD 80
Score = 34.3 bits (75), Expect = 0.069
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 241 CCAVY-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 399
CC V D + ++GS D+T +LWD+ +GK F+ SV F+V +R V
Sbjct: 57 CCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFK-FNAPTRSVDFAVGDRLAV 109
Score = 30.7 bits (66), Expect = 0.85
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +1
Query: 244 CAVYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD---NRQIVSGSRD 414
C D ++ L+GS DKT +LWD+ +T + +T V A S+ N ++ G +D
Sbjct: 200 CKAADDSHFLTGSLDKTAKLWDM---RTLTLLKTYTTVVPVNAVSLSPLLNHVVLGGGQD 256
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 50.4 bits (115), Expect = 1e-06
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 7/133 (5%)
Frame = +1
Query: 136 FLSRQNSHRVEADQR----RKQLRYTSKAFIRSFALHF*CCAVY-DGNYALSGSWDKTLR 300
FLS+++ + +A R K +T +R+ CC DG S DK
Sbjct: 617 FLSQEDGDQRDAVTRCMDVSKGFTFTEVNSVRASTTKVTCCHFSSDGKMLASAGHDKKAV 676
Query: 301 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK-YTIQD-DG 474
LW K E+HT + + FS ++ + S DKT+++W+ A+ K Y+++ G
Sbjct: 677 LWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRVWD--ADNKGYSLRTFMG 734
Query: 475 HSDWVSCVRFSPI 513
HS V+ + F PI
Sbjct: 735 HSSMVTSLDFHPI 747
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/74 (28%), Positives = 39/74 (52%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
DG Y +G D+ + +WD+ + + F H V + F ++ SGS D+T+K+WN
Sbjct: 233 DGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWN 292
Query: 436 TLAECKYTIQDDGH 477
+ + + ++ GH
Sbjct: 293 -VEDKAFITENHGH 305
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/84 (25%), Positives = 39/84 (46%)
Frame = +1
Query: 244 CAVYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 423
C Y + SGS+D+T+++W++ H ++L++ R + G RD+T+
Sbjct: 271 CFRYGTSELYSGSFDRTVKVWNVEDKAFITENHGHQGEILAIDALRKERALTVG-RDRTM 329
Query: 424 KLWNTLAECKYTIQDDGHSDWVSC 495
L++ + E I S SC
Sbjct: 330 -LYHKVPESTRMIYRAPASSLESC 352
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 241 CCAVYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 360
CC + D Y LSGS + T+ LW + K F++ +D+
Sbjct: 352 CCFISDNEY-LSGSDNGTVALWGMLKKKPVFVFKNAHQDI 390
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 346 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
H + V+SVA S D+ + S S+D TI W+
Sbjct: 160 HRRSVVSVALSDDDSRGFSASKDGTIMHWD 189
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/56 (41%), Positives = 38/56 (67%)
Frame = +1
Query: 346 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPI 513
HT DVL +A+S D+ ++S S+DKT++LW T C + H+++V+CV F+P+
Sbjct: 271 HTGDVLDLAWS-DSNLLLSASKDKTVRLWRT--GCDQCLHVFHHNNYVTCVEFNPV 323
Score = 39.5 bits (88), Expect = 0.002
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLW 432
D N LS S DKT+RLW + F H V V F+ V+ SGS D ++W
Sbjct: 282 DSNLLLSASKDKTVRLWRTGCDQCLHVFH-HNNYVTCVEFNPVNKNNFASGSIDGKARIW 340
Query: 433 NTLAECKYTIQDDGHSDWVSCVRFSP 510
L+E + D D +S + + P
Sbjct: 341 G-LSEERVVAWTDVR-DSISAISYQP 364
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +2
Query: 68 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 184
L GH G V +A + +++LS+S+DKT+ +W+ D+
Sbjct: 268 LYGHTGDVLDLAWSDS--NLLLSASKDKTVRLWRTGCDQ 304
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/84 (29%), Positives = 46/84 (54%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
DGNYAL+ D+T+RLW+ G + ++ H ++V V + DN + S D+ + W+
Sbjct: 29 DGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWD 88
Query: 436 TLAECKYTIQDDGHSDWVSCVRFS 507
++ + + GH V+ V+F+
Sbjct: 89 -VSTGRVIRKFRGHDGEVNAVKFN 111
Score = 40.7 bits (91), Expect = 8e-04
Identities = 14/50 (28%), Positives = 31/50 (62%)
Frame = +1
Query: 286 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
D+ + WD++ G+ R+F H +V +V F+ + +VS D+++++W+
Sbjct: 81 DRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWD 130
Score = 40.7 bits (91), Expect = 8e-04
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +1
Query: 241 CCAVYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 420
CC + + GS D + WDL K +F H V SV++ +++ S D T
Sbjct: 234 CCLTNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGT 293
Query: 421 IKLW 432
I++W
Sbjct: 294 IRVW 297
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN--RQIVSGSRDKTIKL 429
DGN L+G D TLRL D G+ + ++ H + N ++ GS D +
Sbjct: 195 DGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGGSEDGLVFF 254
Query: 430 WNTLAECKYTIQDDGHSDWVSCVRFSPIMPTPLLYPVVGT 549
W+ L + K + H V+ V + P L V GT
Sbjct: 255 WD-LVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGT 293
Score = 30.7 bits (66), Expect = 0.85
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 53 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 169
K+ R H+ VT ++ +PK D +L+SS D T+ VWK
Sbjct: 261 KVLSKFRAHDLVVTSVSYHPK-EDCMLTSSVDGTIRVWK 298
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 322 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
K + H VL+ F+ D ++ +D+TI+LWN
Sbjct: 9 KEAHILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWN 46
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV--DNRQIVSGSRDKTIKL 429
D N S S D+T+++W+L + + H K V V + D +++GS D T K+
Sbjct: 154 DTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKV 213
Query: 430 WN-TLAECKYTIQDDGHSDWVSCVRFSPIMP 519
W+ C T+ DGH+ VS V F P +P
Sbjct: 214 WDYQTKSCVQTL--DGHTHNVSAVCFHPELP 242
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/60 (31%), Positives = 34/60 (56%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
D Y ++GS D T ++WD + + HT +V +V F + I++GS D T+++W+
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/85 (25%), Positives = 41/85 (48%)
Frame = +1
Query: 265 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 444
+ L+ + T+ +W+ T+ FE V S F + +V+G+ D I+++N
Sbjct: 29 WILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNT 88
Query: 445 ECKYTIQDDGHSDWVSCVRFSPIMP 519
K + + HSD++ CV P +P
Sbjct: 89 MDKVKVFE-AHSDYIRCVAVHPTLP 112
Score = 35.9 bits (79), Expect = 0.023
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 74 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY 193
GH+ +V Q+ NPK + S+S D+T+ +W L + N+
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV--DNRQIVSGSRDKTIKL 429
D N S S D+T+++W+L + + H K V V + D +++GS D T K+
Sbjct: 154 DTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKV 213
Query: 430 WN-TLAECKYTIQDDGHSDWVSCVRFSPIMP 519
W+ C T+ DGH+ VS V F P +P
Sbjct: 214 WDYQTKSCVQTL--DGHTHNVSAVCFHPELP 242
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/60 (31%), Positives = 34/60 (56%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
D Y ++GS D T ++WD + + HT +V +V F + I++GS D T+++W+
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/85 (25%), Positives = 41/85 (48%)
Frame = +1
Query: 265 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 444
+ L+ + T+ +W+ T+ FE V S F + +V+G+ D I+++N
Sbjct: 29 WILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNT 88
Query: 445 ECKYTIQDDGHSDWVSCVRFSPIMP 519
K + + HSD++ CV P +P
Sbjct: 89 MDKVKVFE-AHSDYIRCVAVHPTLP 112
Score = 35.9 bits (79), Expect = 0.023
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 74 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY 193
GH+ +V Q+ NPK + S+S D+T+ +W L + N+
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV--DNRQIVSGSRDKTIKL 429
D N S S D+T+++W+L + + H K V V + D +++GS D T K+
Sbjct: 154 DTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKV 213
Query: 430 WN-TLAECKYTIQDDGHSDWVSCVRFSPIMP 519
W+ C T+ DGH+ VS V F P +P
Sbjct: 214 WDYQTKSCVQTL--DGHTHNVSAVCFHPELP 242
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/60 (31%), Positives = 34/60 (56%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
D Y ++GS D T ++WD + + HT +V +V F + I++GS D T+++W+
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/85 (25%), Positives = 41/85 (48%)
Frame = +1
Query: 265 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 444
+ L+ + T+ +W+ T+ FE V S F + +V+G+ D I+++N
Sbjct: 29 WILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNT 88
Query: 445 ECKYTIQDDGHSDWVSCVRFSPIMP 519
K + + HSD++ CV P +P
Sbjct: 89 MDKVKVFE-AHSDYIRCVAVHPTLP 112
Score = 35.9 bits (79), Expect = 0.023
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 74 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY 193
GH+ +V Q+ NPK + S+S D+T+ +W L + N+
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +1
Query: 265 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TL 441
+ S +D R+WDL + F+ H K VLSV FS + + SG D ++W+ +
Sbjct: 144 FKASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRM 203
Query: 442 AECKYTIQDDGHSDWVSCVRFSP 510
+ Y I H + VS V++ P
Sbjct: 204 RKLLYII--PAHVNLVSQVKYEP 224
Score = 31.5 bits (68), Expect = 0.49
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = +1
Query: 241 CCAVYDGNYALSGSWDKTLRLWDLAAGKTTRRF---EDHTKDVLSVAFS-VDNRQIVSGS 408
C DG ++ S +LW++ + T + + H + V V FS VD+ + + S
Sbjct: 69 CSLSRDGKILVTCSLSGVPKLWEVP--QVTNKIVVLKGHKEHVTDVVFSSVDDECLATAS 126
Query: 409 RDKTIKLWNT 438
D+T K+W T
Sbjct: 127 TDRTEKIWKT 136
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 48.8 bits (111), Expect = 3e-06
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV--DNRQIVSGSRDKTIKL 429
D N S S D+T+++W+L + + H K V V + D +++GS D T K+
Sbjct: 154 DTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKV 213
Query: 430 WN-TLAECKYTIQDDGHSDWVSCVRFSPIMP 519
W+ C T+ +GH+ VS V F P +P
Sbjct: 214 WDYQTKSCVQTL--EGHTHNVSAVSFHPELP 242
Score = 48.0 bits (109), Expect = 5e-06
Identities = 20/60 (33%), Positives = 35/60 (58%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
D Y ++GS D T ++WD + E HT +V +V+F + I++GS D T+++W+
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWH 257
Score = 37.5 bits (83), Expect = 0.007
Identities = 20/85 (23%), Positives = 40/85 (47%)
Frame = +1
Query: 265 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 444
+ L+ + TL +W+ + F+ V S F + +V+G+ D I+++N
Sbjct: 29 WILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAKFIARKQWVVAGADDMFIRVYNYNT 88
Query: 445 ECKYTIQDDGHSDWVSCVRFSPIMP 519
K + + H+D++ CV P +P
Sbjct: 89 MDKIKVFE-AHADYIRCVAVHPTLP 112
Score = 35.9 bits (79), Expect = 0.023
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 74 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY 193
GH+ +V Q+ NPK + S+S D+T+ +W L + N+
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 48.4 bits (110), Expect = 4e-06
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Frame = +1
Query: 244 CAVYD--GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 417
CA+ D G Y ++GS D+ +++W + H D+ +A S +N I S S D
Sbjct: 250 CAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNIFIASASNDC 309
Query: 418 TIKLWNTLAECKYTIQDDGHSDWVSCVRFSPIMPTP 525
I++W ++ GH+ V+ + FSP +P
Sbjct: 310 VIRVWRLPDGLPVSVL-RGHTGAVTAIAFSPRPGSP 344
Score = 33.9 bits (74), Expect = 0.092
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +2
Query: 68 LRGHNGWVTQIATNPK--YPDMILSSSRDKTLIVW 166
LRGH G VT IA +P+ P +LSSS D T +W
Sbjct: 325 LRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIW 359
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 48.4 bits (110), Expect = 4e-06
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 241 CCAVYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDK 417
C Y NY S +D +++WD G+ ++ +H K SV FS D + VSGS D
Sbjct: 772 CWNSYIKNYLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDC 831
Query: 418 TIKLWN 435
++KLW+
Sbjct: 832 SVKLWS 837
Score = 35.5 bits (78), Expect = 0.030
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = +1
Query: 241 CCAVYDG--NYALS-GSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGS 408
CC + N+ L+ GS D + +DL KT H K V V F +D+ IVS S
Sbjct: 854 CCVQFSSYSNHLLAFGSADYKVYCYDLRYVKTPWCTLAGHEKAVSYVKF-MDSETIVSAS 912
Query: 409 RDKTIKLWN 435
D ++KLWN
Sbjct: 913 TDNSLKLWN 921
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 48.4 bits (110), Expect = 4e-06
Identities = 24/90 (26%), Positives = 46/90 (51%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
DG Y + D LR++D + K + + +L A+S+D + +++G D +++W+
Sbjct: 314 DGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTGGEDDLVQVWS 373
Query: 436 TLAECKYTIQDDGHSDWVSCVRFSPIMPTP 525
+ + K +GH+ WVS V F +P
Sbjct: 374 -MEDRKVVAWGEGHNSWVSGVAFDSYWSSP 402
Score = 32.7 bits (71), Expect = 0.21
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +1
Query: 241 CCA-VYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 375
CCA DG Y L+G D +++W + K E H V VAF
Sbjct: 350 CCAWSMDGKYLLTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 395
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 48.4 bits (110), Expect = 4e-06
Identities = 19/57 (33%), Positives = 35/57 (61%)
Frame = +1
Query: 262 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 432
N L+G DK + WD+ G+ T+ ++ H V ++ F +NR+ V+ S DK++++W
Sbjct: 383 NILLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVW 439
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 259 GNYALSGSWDKTLRLWDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
G+ LS D +++WD+ +GK R + H K V + FS D + ++ DK IK W+
Sbjct: 295 GHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWD 354
Query: 436 T 438
T
Sbjct: 355 T 355
Score = 33.5 bits (73), Expect = 0.12
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Frame = +1
Query: 244 CAVYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ--IVSGSRDK 417
C DG+ L+ +DK ++ WD G+ F + D++Q +++G DK
Sbjct: 333 CFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDK 392
Query: 418 TIKLWNTLAECKYTIQDDGHSDWVSCVRF 504
I W+ + + T + D H V+ + F
Sbjct: 393 KIVQWD-INTGEVTQEYDQHLGAVNTITF 420
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +2
Query: 53 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 232
+L T GH V+ I PK ++LS+ D + +W D N G + GH+
Sbjct: 273 RLVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIW----DVYNSGKCMRTYMGHAKA 328
Query: 233 ISDVVLS 253
+ D+ S
Sbjct: 329 VRDICFS 335
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 48.0 bits (109), Expect = 5e-06
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV--DNRQIVSGSRDKTIKL 429
D N S S D+T+++W+L + + H K V V + D +++GS D T K+
Sbjct: 154 DTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKV 213
Query: 430 WN-TLAECKYTIQDDGHSDWVSCVRFSPIMP 519
W+ C T+ +GH+ VS V F P +P
Sbjct: 214 WDYQTKSCVQTL--EGHTHNVSAVCFHPELP 242
Score = 47.6 bits (108), Expect = 7e-06
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
D Y ++GS D T ++WD + E HT +V +V F + I++GS D T+++W+
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/85 (25%), Positives = 40/85 (47%)
Frame = +1
Query: 265 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 444
+ L+ + TL +W+ + FE V S F + +V+G+ D I+++N
Sbjct: 29 WILASLYSGTLCIWNYQTQVMAKSFEVTELPVRSAKFVARKQWVVAGADDMYIRVYNYNT 88
Query: 445 ECKYTIQDDGHSDWVSCVRFSPIMP 519
K + + HSD++ CV P +P
Sbjct: 89 MDKVKVFE-AHSDYIRCVAVHPTLP 112
Score = 35.9 bits (79), Expect = 0.023
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 74 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY 193
GH+ +V Q+ NPK + S+S D+T+ +W L + N+
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 47.6 bits (108), Expect = 7e-06
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +1
Query: 265 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 435
+ LS S DKT+RLWDL++ KT + H+ V + F+ VD+ +SGS D +++W+
Sbjct: 481 HLLSSSMDKTVRLWDLSS-KTCLKVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRIWS 537
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/59 (35%), Positives = 40/59 (67%)
Frame = +1
Query: 337 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPI 513
F H DVL +++S ++ ++S S DKT++LW+ + K ++ HSD+V+C++F+P+
Sbjct: 464 FVGHLDDVLDLSWS-KSQHLLSSSMDKTVRLWDLSS--KTCLKVFSHSDYVTCIQFNPV 519
Score = 32.7 bits (71), Expect = 0.21
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 9/115 (7%)
Frame = +1
Query: 121 GH--DLIFLSRQNSHRVEADQRRKQLRY---TSKAFIRSFA-LHF*CCAVY---DGNYAL 273
GH D++ LS S + + K +R +SK ++ F+ + C + D NY +
Sbjct: 466 GHLDDVLDLSWSKSQHLLSSSMDKTVRLWDLSSKTCLKVFSHSDYVTCIQFNPVDDNYFI 525
Query: 274 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 438
SGS D +R+W + + + D + V + ++ D + + GS T L+NT
Sbjct: 526 SGSLDAKVRIWSIPDHQVV-DWNDLHEMVTAACYTPDGQGALVGSYKGTCCLYNT 579
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 47.2 bits (107), Expect = 9e-06
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +1
Query: 262 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI-VSGSRDKTIKL 429
N SGS DK +++WD+A GK E H K V +VA++ ++ +SGSRD+T+ L
Sbjct: 228 NIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVL 284
Score = 38.7 bits (86), Expect = 0.003
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Frame = +1
Query: 259 GNYALSGSWDKTLRLWDLAAGKTTR------RFEDHTKDVLSVAFSVDNRQIV-SGSRDK 417
GN+ G+ + ++ +WDL R T + + F+ +NR IV SGS DK
Sbjct: 180 GNFVAIGTMESSIEIWDLDLVNEVLPCVQLGRIAGQT--LFFLTFNWENRNIVASGSEDK 237
Query: 418 TIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPIMPTPLL 531
+K+W+ +CK T++ H V V ++ P LL
Sbjct: 238 KVKVWDVATGKCKVTMEH--HEKKVHAVAWNNYTPEVLL 274
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 47.2 bits (107), Expect = 9e-06
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Frame = +1
Query: 232 HF*CCAVYDGN-YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 408
H C + N Y + S DKT+++W++ K + H + V FSVD +V+ S
Sbjct: 213 HILKCLLSPANKYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTAS 272
Query: 409 RDKTIKLWNTLAECKYTIQDDGHSDWVSC 495
D T +LW+ A + + H V C
Sbjct: 273 SDMTARLWSMPAGKEVKVYQGHHKATVCC 301
Score = 40.7 bits (91), Expect = 8e-04
Identities = 20/65 (30%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAG--KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 429
D +Y L+ + + +RL+D+ + + ++ HT +V++V F D + + SGS D T+K+
Sbjct: 46 DKHY-LAAACNPHIRLFDVNSNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKI 104
Query: 430 WNTLA 444
W+ A
Sbjct: 105 WDLRA 109
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Frame = +1
Query: 250 VYDGNYALSGSWDKTLRLWDLAAGKTT-------RRFEDHTKDVLSVAFSVDNRQIVSGS 408
++DG ++ + T +W L GK T + + H +L S N+ + + S
Sbjct: 171 MWDGTMVVAANNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATAS 230
Query: 409 RDKTIKLWNTLAECKYTIQDDGHSDWV-SCV 498
DKT+K+WN + K GH WV CV
Sbjct: 231 SDKTVKIWN-VDGFKLEKVLTGHQRWVWDCV 260
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/63 (28%), Positives = 34/63 (53%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
D + SGS D T+++WDL A + +E V +V + +++SG ++ I++W+
Sbjct: 89 DAKWMYSGSEDGTVKIWDLRAPGCQKEYES-VAAVNTVVLHPNQTELISGDQNGNIRVWD 147
Query: 436 TLA 444
A
Sbjct: 148 LRA 150
Score = 35.9 bits (79), Expect = 0.023
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 241 CCAVYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 372
C DG + ++ S D T RLW + AGK + ++ H K + A
Sbjct: 259 CVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHHKATVCCA 302
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 47.2 bits (107), Expect = 9e-06
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = +1
Query: 253 YDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKL 429
++ N+ S ++ + +WD+ ++ +E+H K SV FS + +VSGS D +K+
Sbjct: 431 HEKNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKV 490
Query: 430 WNTLAECKYTIQDDGHSDWVSCVRFSP 510
W T E I D ++ + CV+++P
Sbjct: 491 WCTRQEAS-VINIDMKAN-ICCVKYNP 515
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +1
Query: 262 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
N S S D TLRLWD+ R F HT + V +V++ + GS + +++
Sbjct: 561 NELASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLTVNSEYLACGSETNEVYVYH 618
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 46.8 bits (106), Expect = 1e-05
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Frame = +1
Query: 244 CAVYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 423
C DG SG D LRLWD+ GK H+ V SV+ S + +I++ RD
Sbjct: 364 CLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVH 423
Query: 424 KLWNT-LAECKYTIQDDGH---SDWV-SCV 498
+++T E T++ G+ S+W SC+
Sbjct: 424 NVFDTRTLEICGTLRASGNRLASNWSRSCI 453
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/85 (28%), Positives = 43/85 (50%)
Frame = +1
Query: 253 YDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 432
+ + +S ++D+T++LWDL G T T + ++ S+D + SG D ++LW
Sbjct: 326 FSSRHVVSAAYDRTIKLWDLHKGYCTNTVL-FTSNCNAICLSIDGLTVFSGHMDGNLRLW 384
Query: 433 NTLAECKYTIQDDGHSDWVSCVRFS 507
+ + K + GHS V+ V S
Sbjct: 385 D-IQTGKLLSEVAGHSSAVTSVSLS 408
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/86 (20%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +1
Query: 253 YDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 432
Y+ +G D+ +++WD +G + ++L +A + DN+ +++ + + +W
Sbjct: 241 YNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVW 300
Query: 433 N-TLAECKYTIQDDGHSDWVSCVRFS 507
+ + ++T+ GH+D V V S
Sbjct: 301 DVSSGRVRHTL--TGHTDKVCAVDVS 324
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/62 (37%), Positives = 35/62 (56%)
Frame = +1
Query: 274 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 453
SGSWDKTL++W L+ K + H + +VA D+ + +GS D T+K+W + K
Sbjct: 266 SGSWDKTLKVWRLSDSKCLESIQAHDDAINTVAAGFDD-LLFTGSADGTLKVWKRELQGK 324
Query: 454 YT 459
T
Sbjct: 325 GT 326
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/53 (41%), Positives = 31/53 (58%)
Frame = +1
Query: 274 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 432
SGSWDKTL++W L+ K E H V +V D+ + +GS D T+K+W
Sbjct: 262 SGSWDKTLKVWRLSDSKCLESIEAHDDAVNTVVSGFDD-LVFTGSADGTLKVW 313
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1
Query: 346 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCV 498
H V ++ + D + SGS DKT+K+W L++ K + H D V+ V
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWR-LSDSKCLESIEAHDDAVNTV 293
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +1
Query: 241 CCAVYDGN-YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 417
CC G +SGS D T +LWD+ + F D + + +V+FS +I +G D
Sbjct: 144 CCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDAADKIFTGGVDN 202
Query: 418 TIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 510
+K+W+ L + + T+ +GH D ++ + SP
Sbjct: 203 DVKVWD-LRKGEATMTLEGHQDTITGMSLSP 232
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSGSRDKTIKLW 432
DG+ +S S DKT+R WD+ GK ++ +H+ V S + I+SGS D T KLW
Sbjct: 107 DGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLW 166
Query: 433 N 435
+
Sbjct: 167 D 167
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDL----AAGKTTRRFEDH----TKDVLSVAFSVDNRQIVSGSR 411
DG+Y L+ D L +WD+ + + FE H K++L ++S D ++ +GS
Sbjct: 233 DGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSS 292
Query: 412 DKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPIMP 519
D+ + +W+T + + + GH+ V+ F P P
Sbjct: 293 DRMVHIWDTTSR-RTIYKLPGHTGSVNECVFHPTEP 327
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 259 GNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
G SGS D+ + LW + K + H +L + ++ D QIVS S DKT++ W+
Sbjct: 65 GTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWD 124
Score = 36.7 bits (81), Expect = 0.013
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = +1
Query: 274 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
+G D +++WDL G+ T E H + ++ S D +++ D + +W+
Sbjct: 197 TGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWD 250
Score = 34.7 bits (76), Expect = 0.052
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 429
DG +GS D+ + +WD + +T + HT V F I S S DK I L
Sbjct: 283 DGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYL 340
Score = 31.5 bits (68), Expect = 0.49
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 346 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 483
H V ++ F+ I SGS D+ I LW +CK + GH +
Sbjct: 52 HPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKN 97
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 232 HF*CCAVYDGN-YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 408
H C + GN Y + S DKT+++W+L K + H + V FS+D +V+ S
Sbjct: 219 HILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGEYLVTAS 278
Query: 409 RDKTIKLWNTLA 444
D T +LW+ A
Sbjct: 279 SDTTARLWSMRA 290
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Frame = +1
Query: 295 LRLWDLAAGKT---TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECK 453
+RL+DL + R F HTK+V++V F + SGS D ++K+W+ + EC+
Sbjct: 63 IRLFDLRSYNPHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQ 119
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/65 (27%), Positives = 35/65 (53%)
Frame = +1
Query: 253 YDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 432
Y G+ SGS D ++++WDL + R F V +V + +++SG ++ I++W
Sbjct: 94 YTGHMMYSGSEDGSVKIWDLRVRECQREFRS-VSPVNTVVLHPNQTELISGDQNGNIRVW 152
Query: 433 NTLAE 447
+ A+
Sbjct: 153 DLRAD 157
Score = 37.5 bits (83), Expect = 0.007
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 7/93 (7%)
Frame = +1
Query: 250 VYDGNYALSGSWDKTLRLW-DLAAGKTTRRFED------HTKDVLSVAFSVDNRQIVSGS 408
++DG ++ + T +W L +T FE H +L S N+ + + S
Sbjct: 177 MWDGTMVVAANDRGTCYVWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATAS 236
Query: 409 RDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFS 507
DKT+K+WN L K GH WV FS
Sbjct: 237 SDKTVKIWN-LDGFKLEKVLTGHERWVWDCDFS 268
Score = 34.7 bits (76), Expect = 0.052
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 241 CCAVYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 354
C DG Y ++ S D T RLW + AGK ++ H K
Sbjct: 265 CDFSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAHRK 302
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 46.0 bits (104), Expect = 2e-05
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +1
Query: 262 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNT 438
NY LS S DKT+RLW + + F H V SV F+ V+ +SGS D +++WN
Sbjct: 340 NYLLSASMDKTVRLWKVGSNDCLGVFA-HNSYVTSVQFNPVNENYFMSGSIDGKVRIWN- 397
Query: 439 LAECKYTIQDDGHSDWVSCVRFSP 510
++ C D D +S V + P
Sbjct: 398 ISGCSVVDWAD-LKDIISAVCYRP 420
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 71 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 172
RGH G V I+ + + +LS+S DKT+ +WK+
Sbjct: 325 RGHTGEVLDISWSKD--NYLLSASMDKTVRLWKV 356
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +2
Query: 77 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 175
HN +VT + NP + +S S D + +W ++
Sbjct: 367 HNSYVTSVQFNPVNENYFMSGSIDGKVRIWNIS 399
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/81 (29%), Positives = 39/81 (48%)
Frame = +1
Query: 274 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 453
+GS D+T+++WD+A G H + V +A S + + S DK +K W+ L + K
Sbjct: 193 TGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWD-LEQNK 251
Query: 454 YTIQDDGHSDWVSCVRFSPIM 516
GH V C+ P +
Sbjct: 252 VIRSYHGHLSGVYCLALHPTL 272
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +1
Query: 271 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
L+G D R+WD+ H V SV + Q+V+GS D TIK W+
Sbjct: 276 LTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWD 330
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +1
Query: 271 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 426
++GS D T++ WDL GKT H K V ++ S S D T K
Sbjct: 318 VTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADNTKK 369
Score = 34.3 bits (75), Expect = 0.069
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 313 AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
A K R + H V SVAF N +GS D+TIK+W+
Sbjct: 164 APWKNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWD 204
Score = 30.7 bits (66), Expect = 0.85
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = +2
Query: 68 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 247
++GH GWV +A +P + + S D+T+ +W + G+ + L GH + +
Sbjct: 172 IQGHLGWVRSVAFDPS-NEWFCTGSADRTIKIWDVAT-----GVLKLTLTGHIEQVRGLA 225
Query: 248 LS 253
+S
Sbjct: 226 VS 227
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 295 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDD 471
++LWD G RF++H V V F VSG D IK+WN C +T+
Sbjct: 33 IQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLL-- 90
Query: 472 GHSDWVSCVRF 504
GH D++ V+F
Sbjct: 91 GHLDYIRTVQF 101
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/80 (28%), Positives = 40/80 (50%)
Frame = +1
Query: 271 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 450
+SG D +++W+ + H + +V F +N IVS S D+TI++WN +
Sbjct: 67 VSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRT 126
Query: 451 KYTIQDDGHSDWVSCVRFSP 510
++ GH+ +V C F P
Sbjct: 127 CISVL-TGHNHYVMCASFHP 145
Score = 35.9 bits (79), Expect = 0.023
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = +1
Query: 253 YDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 432
++ + +S S D+T+R+W+ + H V+ +F +VS S D+T+++W
Sbjct: 103 HENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
Query: 433 N 435
+
Sbjct: 163 D 163
Score = 35.9 bits (79), Expect = 0.023
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +1
Query: 271 LSGSWDKTLRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
+SG+ D+ ++LW + K H +V SV F IVS S DK+I++W+
Sbjct: 220 VSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWD 276
Score = 35.1 bits (77), Expect = 0.040
Identities = 25/88 (28%), Positives = 40/88 (45%)
Frame = +2
Query: 68 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 247
L GHN +V + +PK D+++S+S D+T+ VW + + P L S SD+
Sbjct: 131 LTGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDIGALKKKSASPADDLMRFSQMNSDLF 189
Query: 248 LSMTVITHFPVLGTRLCVCGISLQARLP 331
+ I + + G V S LP
Sbjct: 190 GGVDAIVKYVLEGHDRGVNWASFHPTLP 217
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +2
Query: 35 KMSETLKLR-GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 178
+M+ET TLRGH V+ + + K D+I+S+S DK++ VW T+
Sbjct: 232 RMNETKAWEVDTLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDATK 279
Score = 28.3 bits (60), Expect = 4.5
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 340 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD--GHSDWVSCVRF 504
E H + V +F IVSG+ D+ +KLW + E K D GH + VS V F
Sbjct: 201 EGHDRGVNWASFHPTLPLIVSGADDRQVKLWR-MNETKAWEVDTLRGHMNNVSSVMF 256
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 510 NHANPIIVSCGWDRTVKVWHLTNW 581
+H NP IVS D+T+++W NW
Sbjct: 102 HHENPWIVSASDDQTIRIW---NW 122
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +1
Query: 265 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTL 441
Y LS S D+T+RLW + + R F H V VAF+ VD+ +SGS D +++W+ +
Sbjct: 335 YLLSSSVDETVRLWRVGCDECLRTF-THNNFVTCVAFNPVDDNYFISGSIDGKVRIWD-V 392
Query: 442 AECKYTIQDDGHSDWVSCVRFSP 510
C+ D D V+ V + P
Sbjct: 393 TRCRVVDYTD-IRDIVTAVCYRP 414
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/64 (28%), Positives = 38/64 (59%)
Frame = +1
Query: 322 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 501
K F+ H ++L +++S + ++S S D+T++LW C ++ H+++V+CV
Sbjct: 313 KPLHEFKGHIGEILDLSWS-EKGYLLSSSVDETVRLWRV--GCDECLRTFTHNNFVTCVA 369
Query: 502 FSPI 513
F+P+
Sbjct: 370 FNPV 373
Score = 30.7 bits (66), Expect = 0.85
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 408
D NY +SGS D +R+WD+ + + D V +V + D + V GS
Sbjct: 374 DDNYFISGSIDGKVRIWDVTRCRVV-DYTDIRDIVTAVCYRPDAKGAVIGS 423
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 77 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 178
HN +VT +A NP + +S S D + +W +TR
Sbjct: 361 HNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTR 394
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +1
Query: 265 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTL 441
Y LS S D+T+RLW + + R F H V VAF+ VD+ +SGS D +++W+ +
Sbjct: 335 YLLSSSVDETVRLWRVGCDECLRTF-THNNFVTCVAFNPVDDNYFISGSIDGKVRIWD-V 392
Query: 442 AECKYTIQDDGHSDWVSCVRFSP 510
C+ D D V+ V + P
Sbjct: 393 TRCRVVDYTD-IRDIVTAVCYRP 414
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/64 (28%), Positives = 38/64 (59%)
Frame = +1
Query: 322 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 501
K F+ H ++L +++S + ++S S D+T++LW C ++ H+++V+CV
Sbjct: 313 KPLHEFKGHIGEILDLSWS-EKGYLLSSSVDETVRLWRV--GCDECLRTFTHNNFVTCVA 369
Query: 502 FSPI 513
F+P+
Sbjct: 370 FNPV 373
Score = 30.7 bits (66), Expect = 0.85
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 408
D NY +SGS D +R+WD+ + + D V +V + D + V GS
Sbjct: 374 DDNYFISGSIDGKVRIWDVTRCRVV-DYTDIRDIVTAVCYRPDAKGAVIGS 423
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 77 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 178
HN +VT +A NP + +S S D + +W +TR
Sbjct: 361 HNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTR 394
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 46.0 bits (104), Expect = 2e-05
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Frame = +1
Query: 208 AFIRSFALHF*CC--AVYD---GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 372
A +R+F H C AV++ G+ S S D TLR+WD+ +T H ++LS
Sbjct: 140 ASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFEILSCD 199
Query: 373 FS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 510
++ D+ + + S DKT+K+W+ + +GH V V+FSP
Sbjct: 200 WNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSP 246
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 271 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI-VSGSRDKTIKLWN 435
L+ SWD T++LW + + R F++H V ++ + + S S D T+++W+
Sbjct: 123 LTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWD 178
Score = 31.1 bits (67), Expect = 0.65
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 65 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIP 202
T + H V Q NPK+ D+ S+S D TL +W + + IP
Sbjct: 144 TFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIP 189
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 45.6 bits (103), Expect = 3e-05
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLW--DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 429
D +Y +GS D TL+ W D A + FE H V A + ++ +VS S D T+K
Sbjct: 51 DQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALAGEST-LVSCSSDTTVKT 109
Query: 430 WNTLAE--CKYTIQDDGHSDWVSCV 498
W+ L++ C T++ HSD+V+C+
Sbjct: 110 WDGLSDGVCTRTLRQ--HSDYVTCL 132
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +1
Query: 259 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 438
G +SG +K LR+WD G + + HT +V + R +SGS D I+LW+
Sbjct: 225 GTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDL 284
Query: 439 -LAECKYTIQDDGHSDW 486
C +T S W
Sbjct: 285 GQQRCLHTYAVHTDSVW 301
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +1
Query: 259 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 429
G + LSGS D +RLWDL + + HT V ++A + + SG RD+ + L
Sbjct: 267 GRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYL 323
Score = 31.9 bits (69), Expect = 0.37
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 355 DVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKY-TIQDDGHSDWVS 492
DVL + S D + +GSRD T+K W + + + + H DWV+
Sbjct: 42 DVLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVN 88
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +1
Query: 319 GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 483
G T + H + V ++A + +VSG +K +++W+ K +++ GH+D
Sbjct: 203 GYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSK-SMKLRGHTD 256
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 45.6 bits (103), Expect = 3e-05
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLW--DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 429
D +Y +GS D TL+ W D A + FE H V A + ++ +VS S D T+K
Sbjct: 51 DQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALAGEST-LVSCSSDTTVKT 109
Query: 430 WNTLAE--CKYTIQDDGHSDWVSCV 498
W+ L++ C T++ HSD+V+C+
Sbjct: 110 WDGLSDGVCTRTLRQ--HSDYVTCL 132
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +1
Query: 259 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 438
G +SG +K LR+WD G + + HT +V + R +SGS D I+LW+
Sbjct: 225 GTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDL 284
Query: 439 -LAECKYTIQDDGHSDW 486
C +T S W
Sbjct: 285 GQQRCLHTYAVHTDSVW 301
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +1
Query: 259 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 429
G + LSGS D +RLWDL + + HT V ++A + + SG RD+ + L
Sbjct: 267 GRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYL 323
Score = 31.9 bits (69), Expect = 0.37
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 355 DVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKY-TIQDDGHSDWVS 492
DVL + S D + +GSRD T+K W + + + + H DWV+
Sbjct: 42 DVLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVN 88
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +1
Query: 319 GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 483
G T + H + V ++A + +VSG +K +++W+ K +++ GH+D
Sbjct: 203 GYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSK-SMKLRGHTD 256
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 45.6 bits (103), Expect = 3e-05
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Frame = +1
Query: 274 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-- 447
+G D T L+D +G+ H+K V SV F D+ +++ S DKT+++W +
Sbjct: 239 TGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGN 298
Query: 448 --CKYTIQDDGHSDWVSCVRFSP 510
C YT+ D HS V V P
Sbjct: 299 YACGYTLND--HSAEVRAVTVHP 319
Score = 36.7 bits (81), Expect = 0.013
Identities = 14/60 (23%), Positives = 35/60 (58%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
DG +G+ +++WD+ + +F+ HT +V +++FS +N ++ + + ++LW+
Sbjct: 364 DGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFS-ENGYFLATAAEDGVRLWD 422
Score = 35.1 bits (77), Expect = 0.040
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Frame = +1
Query: 250 VYDGNYALSGSWDKTLRLW------DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 411
V D + L+ S DKT+R+W + A G T DH+ +V +V N+ VS S
Sbjct: 273 VGDSDLVLTASADKTVRIWRNPGDGNYACGYT---LNDHSAEVRAVTVHPTNKYFVSASL 329
Query: 412 DKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSP 510
D T ++ + C + DD + + F P
Sbjct: 330 DGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHP 363
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 53 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN 187
++ TL GH+ VT + D++L++S DKT+ +W+ D N
Sbjct: 255 QILSTLTGHSKKVTSVKFVGD-SDLVLTASADKTVRIWRNPGDGN 298
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 45.6 bits (103), Expect = 3e-05
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Frame = +1
Query: 274 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-- 447
+G D T L+D +G+ H+K V SV F D+ +++ S DKT+++W +
Sbjct: 239 TGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGN 298
Query: 448 --CKYTIQDDGHSDWVSCVRFSP 510
C YT+ D HS V V P
Sbjct: 299 YACGYTLND--HSAEVRAVTVHP 319
Score = 36.7 bits (81), Expect = 0.013
Identities = 14/60 (23%), Positives = 35/60 (58%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
DG +G+ +++WD+ + +F+ HT +V +++FS +N ++ + + ++LW+
Sbjct: 364 DGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFS-ENGYFLATAAEDGVRLWD 422
Score = 35.1 bits (77), Expect = 0.040
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Frame = +1
Query: 250 VYDGNYALSGSWDKTLRLW------DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 411
V D + L+ S DKT+R+W + A G T DH+ +V +V N+ VS S
Sbjct: 273 VGDSDLVLTASADKTVRIWRNPGDGNYACGYT---LNDHSAEVRAVTVHPTNKYFVSASL 329
Query: 412 DKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSP 510
D T ++ + C + DD + + F P
Sbjct: 330 DGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHP 363
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 53 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN 187
++ TL GH+ VT + D++L++S DKT+ +W+ D N
Sbjct: 255 QILSTLTGHSKKVTSVKFVGD-SDLVLTASADKTVRIWRNPGDGN 298
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 45.6 bits (103), Expect = 3e-05
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +1
Query: 241 CCAVYDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 417
C ++ D L S SWD+T+++W +A K H V SV S + SGS D
Sbjct: 211 CLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVV-STTEAIVFSGSADG 269
Query: 418 TIKLWNTLAECKYT 459
T+K W + KYT
Sbjct: 270 TVKAWKRDQQGKYT 283
Score = 31.9 bits (69), Expect = 0.37
Identities = 29/97 (29%), Positives = 40/97 (41%), Gaps = 11/97 (11%)
Frame = +1
Query: 175 QRRKQLRYTSKAFIRSFALHF*CCAVYDGNYALSGSWDKTLRLWDLAAGKTT--RRFEDH 348
+R KQL Y ++ L C V G+ SGS DKT+ +W T H
Sbjct: 323 EREKQLNYGG--ILKGHKLAVLCLEVA-GSLVFSGSADKTICVWKRDGNIHTCLSVLTGH 379
Query: 349 TKDVLSVAFSVDNRQ---------IVSGSRDKTIKLW 432
T V +A D + SGS DK++K+W
Sbjct: 380 TGPVKCLAVEADREASERRDKKWIVYSGSLDKSVKVW 416
Score = 31.1 bits (67), Expect = 0.65
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +3
Query: 471 WTQRLGVMCQILTNHANPIIVSCGWDRTVKVWHLTN 578
W + + + N ++ S WDRT+KVW + +
Sbjct: 202 WIKHADAVSCLSLNDEQGLLYSASWDRTIKVWRIAD 237
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 45.2 bits (102), Expect = 4e-05
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSGSRDKTIKLW 432
+GN+ L+ S D+ ++L+D+ K + F HTKDV S+A+ + + VSGS D +I W
Sbjct: 321 NGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHW 380
Score = 40.7 bits (91), Expect = 8e-04
Identities = 22/80 (27%), Positives = 43/80 (53%)
Frame = +1
Query: 271 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 450
+SG D+ ++LWD +G+ H VLSV ++ + +++ S+D+ IKL++ +
Sbjct: 284 VSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYD-IRTM 342
Query: 451 KYTIQDDGHSDWVSCVRFSP 510
K GH+ V+ + + P
Sbjct: 343 KELQSFRGHTKDVTSLAWHP 362
Score = 32.3 bits (70), Expect = 0.28
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = +1
Query: 253 YDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 432
++ NY +SG TL+ W H + + ++F + + S S D T+K+W
Sbjct: 175 HNENYMVSGDDGGTLKYWQNNMNNVKANKTAHKESIRDLSFCKTDLKFCSCSDDTTVKVW 234
Query: 433 N 435
+
Sbjct: 235 D 235
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +2
Query: 47 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIP 202
T+K + RGH VT +A +P + + +S S D ++ W + + IP
Sbjct: 341 TMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGHENPQIEIP 392
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 346 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 438
H DV SV + +VSG +D+ +KLW+T
Sbjct: 267 HGWDVKSVDWHPTKSLLVSGGKDQLVKLWDT 297
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/58 (24%), Positives = 26/58 (44%)
Frame = +1
Query: 259 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 432
G ++GS LW+ + + H + + S+ +S + +VSG T+K W
Sbjct: 135 GRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWSHNENYMVSGDDGGTLKYW 192
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 45.2 bits (102), Expect = 4e-05
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 295 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDD 471
++LWD G RF++H V V F VSG D IK+WN C +T+
Sbjct: 33 IQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLL-- 90
Query: 472 GHSDWVSCVRF 504
GH D++ V+F
Sbjct: 91 GHLDYIRTVQF 101
Score = 40.7 bits (91), Expect = 8e-04
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = +1
Query: 271 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 450
+SG D +++W+ + H + +V F + IVS S D+TI++WN +
Sbjct: 67 VSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
Query: 451 KYTIQDDGHSDWVSCVRFSP 510
++ GH+ +V C F P
Sbjct: 127 CVSVL-TGHNHYVMCASFHP 145
Score = 37.1 bits (82), Expect = 0.010
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +1
Query: 265 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 444
+ +S S D+T+R+W+ + H V+ +F +VS S D+T+++W+ A
Sbjct: 107 WIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA 166
Query: 445 ECKYTI 462
K T+
Sbjct: 167 LRKKTV 172
Score = 35.9 bits (79), Expect = 0.023
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +1
Query: 271 LSGSWDKTLRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
+SG+ D+ ++LW + K H +V SV F IVS S DK+I++W+
Sbjct: 220 VSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWD 276
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +2
Query: 35 KMSETLKLR-GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 178
+M+ET TLRGH V+ + + K D+I+S+S DK++ VW T+
Sbjct: 232 RMNETKAWEVDTLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDATK 279
Score = 31.1 bits (67), Expect = 0.65
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +2
Query: 68 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 172
L GHN +V + +PK D+++S+S D+T+ VW +
Sbjct: 131 LTGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDI 164
Score = 29.5 bits (63), Expect = 2.0
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 340 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD--GHSDWVSCVRF 504
E H + V AF IVSG+ D+ +KLW + E K D GH + VS V F
Sbjct: 201 EGHDRGVNWAAFHPTLPLIVSGADDRQVKLWR-MNETKAWEVDTLRGHMNNVSSVMF 256
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 432
DG S SWD+TL++W K F + D ++ +N I +GS D+ IK+W
Sbjct: 176 DGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGDIYTGSSDQRIKVW 234
Score = 33.9 bits (74), Expect = 0.092
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGK---TTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 426
+G+ SG D ++ +W+ G HT+ VL +A D + SGS DKT++
Sbjct: 271 NGSLLHSGGSDGSILVWERDDGGDIVVVGMLRGHTESVLCLAVVSDI--LCSGSADKTVR 328
Query: 427 LWNTLA-ECKYTIQDDGHSDWVSCV 498
LW A + +GH V C+
Sbjct: 329 LWKCSAKDYSCLAMLEGHLGPVKCL 353
Score = 30.7 bits (66), Expect = 0.85
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = +3
Query: 471 WTQRLGVMCQILTNHANPIIVSCGWDRTVKVWHLTNW 581
W + + + + ++ S WDRT+K+W T++
Sbjct: 161 WVHHVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDF 197
Score = 29.5 bits (63), Expect = 2.0
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 11/77 (14%)
Frame = +1
Query: 244 CAVYDGNYALSGSWDKTLRLWDLAAG--KTTRRFEDHTKDV--LSVAFSVDNRQ------ 393
C + SGS DKT+RLW +A E H V L+ AF D+R+
Sbjct: 310 CLAVVSDILCSGSADKTVRLWKCSAKDYSCLAMLEGHLGPVKCLTGAFR-DSRKADEASY 368
Query: 394 -IVSGSRDKTIKLWNTL 441
I SG D +K+W L
Sbjct: 369 HIYSGGLDSQVKVWQVL 385
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 346 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQDDGHSDWVSCVRFS 507
H V +A S D + S S D+T+K+W T +C + + H D ++ V S
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESF-TNAHDDAINAVALS 217
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 62 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 169
G LRGH V +A D++ S S DKT+ +WK
Sbjct: 299 GMLRGHTESVLCLAV---VSDILCSGSADKTVRLWK 331
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 44.8 bits (101), Expect = 5e-05
Identities = 21/59 (35%), Positives = 40/59 (67%)
Frame = +1
Query: 337 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPI 513
F H DVL +++S ++ ++S S DKT++LW+ E + ++ H+D+V+CV+F+P+
Sbjct: 515 FTGHLDDVLDLSWS-RSQLLLSSSMDKTVRLWDI--ETQSCLKLFAHNDYVTCVQFNPL 570
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 271 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 435
LS S DKT+RLWD+ + F H V V F+ +D +SGS D I++WN
Sbjct: 534 LSSSMDKTVRLWDIETQSCLKLFA-HNDYVTCVQFNPLDEDYFISGSLDAKIRIWN 588
Score = 34.3 bits (75), Expect = 0.069
Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
D +Y +SGS D +R+W++ + + + D + V +V ++ D + GS + +L++
Sbjct: 571 DEDYFISGSLDAKIRIWNI-SNRQVVEWNDLKEMVTAVCYTPDGQAAFVGSINGHCRLYS 629
Query: 436 TLAECK--YTIQDD------GHSDWVSCVRFSPIMPTPLL 531
+CK T Q D + ++ +FSPI P+ +L
Sbjct: 630 A-EDCKLEQTNQIDLQNKKKAQAKKITAFQFSPINPSEVL 668
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 68 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 175
L HN +VT + NP D +S S D + +W ++
Sbjct: 555 LFAHNDYVTCVQFNPLDEDYFISGSLDAKIRIWNIS 590
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 44.8 bits (101), Expect = 5e-05
Identities = 25/85 (29%), Positives = 39/85 (45%)
Frame = +1
Query: 274 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 453
+GS D+T+++WD+A G H V +A S + + S DK +K W+ L + K
Sbjct: 187 TGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWD-LEQNK 245
Query: 454 YTIQDDGHSDWVSCVRFSPIMPTPL 528
GH V C+ P + L
Sbjct: 246 VIRSYHGHLHGVYCLALHPTLDVVL 270
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +1
Query: 241 CCAVYDG-NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 417
C A++ + L+G D R+WD+ K H DV SV + Q+++GS D
Sbjct: 259 CLALHPTLDVVLTGGRDSVCRVWDIRT-KMQIFVLPHDSDVFSVLARPTDPQVITGSHDS 317
Query: 418 TIKLWN 435
TIK W+
Sbjct: 318 TIKFWD 323
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +1
Query: 271 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 426
++GS D T++ WDL GK+ +H K V ++A VS S D K
Sbjct: 311 ITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFVSASADNIKK 362
Score = 34.3 bits (75), Expect = 0.069
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 313 AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
A K R + H V SVAF N +GS D+TIK+W+
Sbjct: 158 APWKNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWD 198
Score = 30.7 bits (66), Expect = 0.85
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 68 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 166
L+GH GWV +A +P + + S D+T+ +W
Sbjct: 166 LQGHLGWVRSVAFDPS-NEWFCTGSADRTIKIW 197
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 44.8 bits (101), Expect = 5e-05
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Frame = +1
Query: 271 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
+SG D +R+WD GK ++ ++ H + + S+ + D+ ++GS DKT KLW+
Sbjct: 191 VSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWD 248
Score = 35.1 bits (77), Expect = 0.040
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
+G+ S + D T +W G+ + H+ V S D+ ++++GS D+T KLW+
Sbjct: 48 NGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSSRLITGSADQTAKLWD 107
Score = 32.3 bits (70), Expect = 0.28
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 241 CCAVY-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 399
CC + D + ++GS D+T +LWD+ +GK F+ SV FSV + V
Sbjct: 84 CCDISRDSSRLITGSADQTAKLWDVKSGKELFTFK-FGAPARSVDFSVGDHLAV 136
Score = 30.7 bits (66), Expect = 0.85
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 244 CAVYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRD 414
C D ++ L+GS DKT +LWD+ + + V +VA S + N ++ G +D
Sbjct: 227 CKAADDSHFLTGSHDKTAKLWDMRTLTLIKTYTT-VVPVNAVAMSPLLNHVVLGGGQD 283
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 44.8 bits (101), Expect = 5e-05
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +1
Query: 271 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 435
LS S DKT+RLWD+ KT + H V + FS VD +SGS D I++W+
Sbjct: 521 LSSSMDKTVRLWDIET-KTCLKLFAHNDYVTCIQFSPVDENYFLSGSLDAKIRIWS 575
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/56 (33%), Positives = 38/56 (67%)
Frame = +1
Query: 346 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPI 513
H +L +++S ++ ++S S DKT++LW+ E K ++ H+D+V+C++FSP+
Sbjct: 505 HLDAILDLSWS-KSQLLLSSSMDKTVRLWDI--ETKTCLKLFAHNDYVTCIQFSPV 557
Score = 33.5 bits (73), Expect = 0.12
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
D NY LSGS D +R+W + + + D + V + ++ D + + GS + ++
Sbjct: 558 DENYFLSGSLDAKIRIWSI-QDRHVVEWSDLHEMVTAACYTPDGQGALIGSHKGICRAYD 616
Query: 436 TLAECK--YTIQDDGHSD-------WVSCVRFSPIMPTPLL 531
T +CK T Q D S+ ++ +FSP+ P+ +L
Sbjct: 617 T-EDCKLSQTNQIDVQSNKKSQAKRKITSFQFSPVNPSEVL 656
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 44.0 bits (99), Expect = 9e-05
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 265 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 444
Y+ WD +LRL L K R F+ H V+S++ +SGS D+T+ LW+
Sbjct: 92 YSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRV 151
Query: 445 E-CKYTIQDDG 474
E C+ ++ G
Sbjct: 152 EKCQGLLRVQG 162
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 44.0 bits (99), Expect = 9e-05
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 265 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 444
Y+ WD +LRL L K R F+ H V+S++ +SGS D+T+ LW+
Sbjct: 89 YSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRV 148
Query: 445 E-CKYTIQDDG 474
E C+ ++ G
Sbjct: 149 EKCQGLLRVQG 159
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 44.0 bits (99), Expect = 9e-05
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAG-KTTRRFEDH--TKDVLSVAFS-VDNRQIVSGSRDKTI 423
DG + + + + LWDLA K +F H +K V+ F +D+ I SGS D +
Sbjct: 408 DGKFFIVNLSCQEIHLWDLAGEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQV 467
Query: 424 KLWNTLAECKYTIQDDGHSDWVSCVRFSPIMPTPL 528
+WN L K GHS V+CV ++P P L
Sbjct: 468 YIWN-LKNTKPLEVLSGHSMTVNCVSWNPKNPRML 501
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +1
Query: 241 CCAVYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN-RQIVSGSRDK 417
C D ++ SGS D + +W+L K H+ V V+++ N R + S S D+
Sbjct: 449 CFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQ 508
Query: 418 TIKLW 432
TI++W
Sbjct: 509 TIRIW 513
Score = 34.3 bits (75), Expect = 0.069
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 68 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 166
L GH+ V ++ NPK P M+ S+S D+T+ +W
Sbjct: 481 LSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +1
Query: 259 GNYALSGSWDKTLRLWDLAAGKTTR---RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 429
G Y + S D T +W + E H V V++S D+ ++++ + +KL
Sbjct: 236 GKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPDDTKLLTCGNAEVLKL 295
Query: 430 WN 435
W+
Sbjct: 296 WD 297
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 44.0 bits (99), Expect = 9e-05
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN-RQIVSGSRDKTIKLW 432
DG ++GS D ++ ++DL A + + R HT DV +V F+ ++ I+SGS D K+W
Sbjct: 240 DGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNLILSGSDDNLCKVW 299
Query: 433 N 435
+
Sbjct: 300 D 300
Score = 41.1 bits (92), Expect = 6e-04
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Frame = +1
Query: 241 CCAVYDGNYALSGSWDKTLRLWD----LAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 408
C A GN LSGS D ++WD + K H + V + D R +S
Sbjct: 278 CFADESGNLILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNG 337
Query: 409 RDKTIKLWN 435
+D+TIKLW+
Sbjct: 338 KDQTIKLWD 346
Score = 27.9 bits (59), Expect = 6.0
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDL 312
DG Y +S D+T++LWD+
Sbjct: 329 DGRYFISNGKDQTIKLWDI 347
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 44.0 bits (99), Expect = 9e-05
Identities = 22/84 (26%), Positives = 41/84 (48%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
DG ++GS DK L++W L G + H V+ V F + + S +D+ +K W+
Sbjct: 593 DGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWD 652
Query: 436 TLAECKYTIQDDGHSDWVSCVRFS 507
+ ++ + +GH + C+ S
Sbjct: 653 A-DKFEHLLTLEGHHAEIWCLAIS 675
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/75 (28%), Positives = 35/75 (46%)
Frame = +1
Query: 259 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 438
G+ SGS D + LWD+ R H V + F +++VS S+DK +++W+
Sbjct: 118 GSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDL 177
Query: 439 LAECKYTIQDDGHSD 483
+ I HS+
Sbjct: 178 ETQHCMQIVSGHHSE 192
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/76 (28%), Positives = 36/76 (47%)
Frame = +1
Query: 277 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKY 456
G D ++R+WD G F H V ++ ++ + SGS+D I LW+ + E
Sbjct: 82 GYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGE-SG 140
Query: 457 TIQDDGHSDWVSCVRF 504
+ GH D V+ + F
Sbjct: 141 LFRLRGHRDQVTDLVF 156
Score = 36.3 bits (80), Expect = 0.017
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 286 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTI 462
D T++++ + + K H V+ + S D IV+GS+DK +K+W +C +I
Sbjct: 561 DSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSI 620
Query: 463 QDDGHSDWVSCVRF 504
H D V V+F
Sbjct: 621 --FAHGDSVMGVKF 632
Score = 31.9 bits (69), Expect = 0.37
Identities = 16/66 (24%), Positives = 32/66 (48%)
Frame = +1
Query: 250 VYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 429
V + +Y S D+ ++ WD + E H ++ +A S +V+GS D++++
Sbjct: 633 VRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRR 692
Query: 430 WNTLAE 447
W+ E
Sbjct: 693 WDRSEE 698
Score = 30.7 bits (66), Expect = 0.85
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +2
Query: 77 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 247
H G VT + N K M+ S S+D +I+W + + + RL GH ++D+V
Sbjct: 105 HKGAVTALRYN-KVGSMLASGSKDNDIILWDVVGESGLF-----RLRGHRDQVTDLV 155
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 355 DVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFS 507
DVL+VA S D + I D T+K++ + K+ + GH V C+ S
Sbjct: 542 DVLAVAISPDAKHIAVALLDSTVKVF-YMDSLKFYLSLYGHKLPVMCIDIS 591
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 43.6 bits (98), Expect = 1e-04
Identities = 33/87 (37%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 432
D SGS D + + D A GKT HT VLSV S D I +GS D+T++LW
Sbjct: 212 DPRVLFSGSDDGHVNMHD-AEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLW 270
Query: 433 NTLAECKYTIQD-DGHSDWVSCVRFSP 510
+ + + IQ H+D V V F P
Sbjct: 271 D--LKMRAAIQTMSNHNDQVWSVAFRP 295
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 41 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 172
+E L G++ GH WV + +P I + S D+T+ +W L
Sbjct: 230 AEGKTLLGSMSGHTSWVLSVDASPD-GGAIATGSSDRTVRLWDL 272
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 43.6 bits (98), Expect = 1e-04
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +1
Query: 286 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL 441
D +RL+D+ K R F HT + + FS D + ++S S D ++++W+ +
Sbjct: 536 DFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVI 587
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 244 CAVYDGNYALSGSWDKTLRLWDLAAGK 324
C DG + +S S D +LR+WD+ K
Sbjct: 564 CFSEDGKWVISSSMDGSLRIWDVILAK 590
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/90 (25%), Positives = 45/90 (50%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
DG + + D LR++D K + + +L ++S+D + I++G D +++W+
Sbjct: 314 DGAHLATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTGGEDDLVQVWS 373
Query: 436 TLAECKYTIQDDGHSDWVSCVRFSPIMPTP 525
+ + K +GH+ WVS V F +P
Sbjct: 374 -MEDRKVVAWGEGHNSWVSGVAFDSNWSSP 402
Score = 31.5 bits (68), Expect = 0.49
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +1
Query: 241 CCA-VYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 375
CC+ DG Y L+G D +++W + K E H V VAF
Sbjct: 350 CCSWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 395
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +1
Query: 241 CCAVYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 420
C AV+ G SGSWDKTL++W L+ K + H D ++ + D R + S S D
Sbjct: 179 CLAVHAG-IIYSGSWDKTLKVWRLSDLKCLESIKAH-DDAINGLVAGDGR-VYSASADGK 235
Query: 421 IKLW 432
+K+W
Sbjct: 236 VKIW 239
Score = 32.7 bits (71), Expect = 0.21
Identities = 28/95 (29%), Positives = 39/95 (41%), Gaps = 10/95 (10%)
Frame = +1
Query: 256 DGNYALSGS-------WDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRD 414
DGN+ G W+K + D + H VL + V + SGS D
Sbjct: 280 DGNWVYGGGSDGFVIGWEKKEKEGDFEEWRLGFETRGHNMAVLCMC--VVGEMVCSGSAD 337
Query: 415 KTIKLWN---TLAECKYTIQDDGHSDWVSCVRFSP 510
K+I LW T CK+ + GH V C++ SP
Sbjct: 338 KSIGLWRREVTGMLCKFGV-IHGHEGPVKCLQASP 371
Score = 31.1 bits (67), Expect = 0.65
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 459 HPR*WTQRL-GVMCQILTNHANPIIVSCGWDRTVKVWHLTN 578
H R W + + C L HA II S WD+T+KVW L++
Sbjct: 166 HKRLWIEHADSISC--LAVHAG-IIYSGSWDKTLKVWRLSD 203
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +1
Query: 253 YDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 432
Y +SGS D + +W+L G+ + + H V VA +DN IVS S D+T+K W
Sbjct: 81 YPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVA--IDNEDIVSSSVDQTLKRW 138
Score = 36.3 bits (80), Expect = 0.017
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2
Query: 53 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 232
KLR L GH+ V I + I +SSRD+T+ VW L + +K L GH+ F
Sbjct: 11 KLRCELHGHDDDVRGICVCND--ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSF 68
Query: 233 I 235
+
Sbjct: 69 V 69
Score = 35.1 bits (77), Expect = 0.040
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
D +S S D+TL+ W G+ ++ H + +V + + ++VSGS D ++KLW
Sbjct: 122 DNEDIVSSSVDQTLKRW--RNGQLVESWDAHQSPIQAV-IRLPSGELVSGSSDASLKLW- 177
Query: 436 TLAECKYTIQD-DGHSDWVSCVRFSP 510
+ K ++Q GH+D V + P
Sbjct: 178 ---KGKTSLQTLSGHTDTVRGLAVMP 200
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +1
Query: 253 YDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 432
Y +SGS D + +W+L G+ + + H V VA +DN IVS S D+T+K W
Sbjct: 81 YPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVA--IDNEDIVSSSVDQTLKRW 138
Score = 36.3 bits (80), Expect = 0.017
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2
Query: 53 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 232
KLR L GH+ V I + I +SSRD+T+ VW L + +K L GH+ F
Sbjct: 11 KLRCELHGHDDDVRGICVCND--ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSF 68
Query: 233 I 235
+
Sbjct: 69 V 69
Score = 35.1 bits (77), Expect = 0.040
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
D +S S D+TL+ W G+ ++ H + +V + + ++VSGS D ++KLW
Sbjct: 122 DNEDIVSSSVDQTLKRW--RNGQLVESWDAHQSPIQAV-IRLPSGELVSGSSDASLKLW- 177
Query: 436 TLAECKYTIQD-DGHSDWVSCVRFSP 510
+ K ++Q GH+D V + P
Sbjct: 178 ---KGKTSLQTLSGHTDTVRGLAVMP 200
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +1
Query: 265 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 435
+ LS S D+T+RLW + + R H V VAF+ VD+ +SGS D +++W+
Sbjct: 376 FLLSSSVDETVRLWRVGSSDECIRVFSHKSFVTCVAFNPVDDNYFISGSIDGKVRIWD 433
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/59 (30%), Positives = 35/59 (59%)
Frame = +1
Query: 337 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPI 513
F HT ++L +++S + ++S S D+T++LW + I+ H +V+CV F+P+
Sbjct: 359 FRGHTGEILDLSWS-EKGFLLSSSVDETVRLWR-VGSSDECIRVFSHKSFVTCVAFNPV 415
Score = 33.1 bits (72), Expect = 0.16
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
D NY +SGS D +R+WD++ + + D + V ++ + D + V GS + ++
Sbjct: 416 DDNYFISGSIDGKVRIWDVSQFRVV-DYTDIRQIVTALCYRPDGKGAVVGSMTGECRFYH 474
Query: 436 T 438
T
Sbjct: 475 T 475
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 41.9 bits (94), Expect = 3e-04
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +1
Query: 244 CAVYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 423
C G SGS DKT+++WDL + + HT V S+ ++ ++S S D TI
Sbjct: 263 CFAVGGQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSLL--CWDKCLISSSLDGTI 320
Query: 424 KLW 432
K+W
Sbjct: 321 KVW 323
Score = 32.7 bits (71), Expect = 0.21
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = +1
Query: 340 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW--NTLAECKYTIQ 465
E H+ +V F+V + + SGS DKTIK+W NTL +C T++
Sbjct: 255 EGHSGEV--TCFAVGGQMLYSGSVDKTIKMWDLNTL-QCIMTLK 295
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/91 (21%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Frame = +1
Query: 214 IRSFALHF*CCAVYDGNYALSGSWDKTLRLWDLAAGKT-TRRFEDHTKDVLSVAFSVDNR 390
+RS +L C + G + L W G E H K++ +A +
Sbjct: 85 MRSSSLRKWVCKYWKDGKCKRGEQCQFLHSWSCFPGLAMVASLEGHNKELKGIALPEGSD 144
Query: 391 QIVSGSRDKTIKLWN-TLAECKYTIQDDGHS 480
++ S S D T+++W+ +C ++I D +
Sbjct: 145 KLFSVSIDGTLRVWDCNSGQCVHSINLDAEA 175
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +2
Query: 41 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 172
S+ K +L GH+G VT A + M+ S S DKT+ +W L
Sbjct: 245 SDPFKYLTSLEGHSGEVTCFAVGGQ---MLYSGSVDKTIKMWDL 285
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 41.9 bits (94), Expect = 3e-04
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +1
Query: 244 CAVYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 423
C V G SGS DKT+++WDL + + H V S+ ++ ++S S D TI
Sbjct: 317 CFVVGGEVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSLL--CWDKCLISSSLDGTI 374
Query: 424 KLW 432
KLW
Sbjct: 375 KLW 377
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +1
Query: 373 FSVDNRQIVSGSRDKTIKLW--NTLAECKYTIQ 465
F V + SGS DKTIK+W NTL +C+ T++
Sbjct: 318 FVVGGEVLYSGSVDKTIKVWDLNTL-QCRMTLK 349
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 41.9 bits (94), Expect = 3e-04
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Frame = +1
Query: 109 SEIPGHDLIFLSRQNSHRVEADQRRKQLRYTSKAFIRSFALHF*CCAVYDGNYALSGSWD 288
S+ GH +F S A + + + +I + F + + L+ S D
Sbjct: 90 SDEDGHVSLFNSSSKKFASSATHQENTEKARFRDWIAHYNAIFDISWIKGDSCLLTASGD 149
Query: 289 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSGSRDKTIKLWN 435
+T+++WD+ K T HT V S+ N +VSGSRD LW+
Sbjct: 150 QTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWD 199
Score = 35.9 bits (79), Expect = 0.023
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +2
Query: 44 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 172
E K G L GH G V + ++P D+++S SRD +W L
Sbjct: 158 EENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDL 200
Score = 32.7 bits (71), Expect = 0.21
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDN-RQIVSGSRDKTIKL 429
DG Y LSGS D +W + + + H +V +V +S ++ + S D T++L
Sbjct: 349 DGEYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPSEIGKVATASDDFTVRL 408
Query: 430 WN 435
WN
Sbjct: 409 WN 410
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 41.9 bits (94), Expect = 3e-04
Identities = 22/62 (35%), Positives = 35/62 (56%)
Frame = +1
Query: 247 AVYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 426
AV DG + S SWDKTL++W + + + H V ++A S N + +GS D+ I+
Sbjct: 202 AVSDG-FIYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVST-NGTVYTGSADRRIR 259
Query: 427 LW 432
+W
Sbjct: 260 VW 261
Score = 37.1 bits (82), Expect = 0.010
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLW---DLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 423
DG+ SGS D+++ +W D + R H K +LS+ F+V + ++SGS D+T+
Sbjct: 291 DGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSL-FNVSDL-LLSGSADRTV 348
Query: 424 KLWNTLAECKYTIQD--DGHS 480
++W + Y+ + GH+
Sbjct: 349 RIWRRGPDSSYSCLEVLSGHT 369
Score = 32.3 bits (70), Expect = 0.28
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +1
Query: 247 AVYDGNYALSGSWDKTLRLWDLAAGKTTRRF----EDHTKDVLSVAFSVDNRQIVSGSRD 414
AV +GS D+ +R+W G+ E H V ++A + D + SGS D
Sbjct: 242 AVSTNGTVYTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCD 301
Query: 415 KTIKLW 432
++I +W
Sbjct: 302 RSILVW 307
Score = 31.5 bits (68), Expect = 0.49
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 41 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN 187
S + +RG LRGH+ + + D++LS S D+T+ +W+ D +
Sbjct: 313 SNYMAVRGALRGHDKAILSLFN---VSDLLLSGSADRTVRIWRRGPDSS 358
Score = 27.5 bits (58), Expect = 7.9
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 370 AFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQDDGHSDWVSCVRFS 507
A +V + I S S DKT+K+W CK +I+ H D V+ + S
Sbjct: 200 ALAVSDGFIYSVSWDKTLKIWRASDLRCKESIK--AHDDAVNAIAVS 244
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +1
Query: 274 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 453
+G D T L+D +G+ H+K V S+ F D +++ S DKT+++W +
Sbjct: 239 TGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGN 298
Query: 454 YT 459
YT
Sbjct: 299 YT 300
Score = 37.1 bits (82), Expect = 0.010
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +1
Query: 250 VYDGNYALSGSWDKTLRLWDLAA-GKTTRR--FEDHTKDVLSVAFSVDNRQIVSGSRDKT 420
V D + L+ S DKT+R+W + G T R +DH+ +V +V N+ VS S D T
Sbjct: 273 VGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTVHATNKYFVSASLDST 332
Score = 31.1 bits (67), Expect = 0.65
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 53 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN 187
++ TL GH+ VT I D++L++S DKT+ +W + D N
Sbjct: 255 QILSTLTGHSKKVTSIKFVGD-TDLVLTASSDKTVRIWGCSEDGN 298
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Frame = +1
Query: 253 YDGNYALSGSWDKTLRLWDLAAG---KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 423
++G Y S S D+T +W+++A H K V+++ +S D+RQ+++ ++ I
Sbjct: 284 HNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVI 343
Query: 424 KLWNT-LAECKYTIQDDGHSDWVSC 495
+ W+ +C + + G S +SC
Sbjct: 344 RRWDVDSGDCVHMYEKGGISP-ISC 367
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKD---VLSVAFSVDNRQIVSGSRDKTI 423
D Y L ++ +RLW++ K R++ H + + S I SGS D +
Sbjct: 454 DNKYILVNLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQV 513
Query: 424 KLWNTLAECKYTIQDDGHSDWVSCVRFSP 510
+W+ + K ++ GH+ V+CV +SP
Sbjct: 514 YIWHR-STGKLIVELPGHAGAVNCVSWSP 541
Score = 35.9 bits (79), Expect = 0.023
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +1
Query: 244 CAVY-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 420
C Y DG ++G D+++ +WDL + T+ V +A + D + +VS +D
Sbjct: 367 CGWYPDGQGIIAGMTDRSICMWDLDGREKECWKGQRTQKVSDIAMTDDGKWLVSVCKDSV 426
Query: 421 IKLWNTLAECKYTIQDD 471
I L++ A + I+++
Sbjct: 427 ISLFDREATVERLIEEE 443
Score = 35.9 bits (79), Expect = 0.023
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +1
Query: 241 CCAVYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN-RQIVSGSRDK 417
C Y + SGS D + +W + GK H V V++S N + S S D
Sbjct: 495 CFGGYKQAFIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDG 554
Query: 418 TIKLW 432
TI++W
Sbjct: 555 TIRIW 559
Score = 34.7 bits (76), Expect = 0.052
Identities = 21/74 (28%), Positives = 35/74 (47%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
DG + +S D + L+D A T R + + S + S DN+ I+ ++ I+LWN
Sbjct: 414 DGKWLVSVCKDSVISLFDREA--TVERLIEEEDMITSFSLSNDNKYILVNLLNQEIRLWN 471
Query: 436 TLAECKYTIQDDGH 477
+ K + GH
Sbjct: 472 IEGDPKIVSRYKGH 485
Score = 34.3 bits (75), Expect = 0.069
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +1
Query: 322 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD--GHSDWVSC 495
+T + E HT +V + FS + + + S S+D+T +W A+ +++ GH V
Sbjct: 265 QTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIA 324
Query: 496 VRFSP 510
+ +SP
Sbjct: 325 ILWSP 329
Score = 31.1 bits (67), Expect = 0.65
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 86 WVTQIATNPKYPDMILSSSRDKTLIVWKLTRD 181
W Q + N KY + SSS+D+T I+W+++ D
Sbjct: 278 WFLQFSHNGKY---LASSSKDQTAIIWEISAD 306
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +2
Query: 47 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 178
T KL L GH G V ++ +P M+ S+S D T+ +W L R
Sbjct: 520 TGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDR 563
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +1
Query: 262 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKL 429
N S S DK +++WD+A G E HTK+V +VA++ ++SGS D+T+ L
Sbjct: 247 NILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVL 303
Score = 35.9 bits (79), Expect = 0.023
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +1
Query: 262 NYALSGSWDKTLRLWDLAAGKTT--RRFEDHTKDVLSVAFSVDNRQIVS-GSRDKTIKLW 432
N +GS D+T++LWDL+ + + + + +AFS DN +++ G +KLW
Sbjct: 383 NLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIAFSPDNPFLLAMGGVMGELKLW 442
Query: 433 NTLAE 447
+TL++
Sbjct: 443 DTLSD 447
Score = 34.7 bits (76), Expect = 0.052
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = +2
Query: 65 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 184
T+ GH+ T ++ N P+++ + S+D+T+ +W L+ +E
Sbjct: 364 TINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNE 403
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/74 (31%), Positives = 34/74 (45%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
D + SGS D T+ +W++ G T H V V + I S S DKT+ +W
Sbjct: 129 DDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGSFIASQSDDKTVIIWR 188
Query: 436 TLAECKYTIQDDGH 477
T ++ + DGH
Sbjct: 189 T-SDWGMAHRTDGH 201
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/69 (31%), Positives = 32/69 (46%)
Frame = +1
Query: 307 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDW 486
D+ K HT DV+ + +S D+ + SGS D T+ +WN T+ GH
Sbjct: 104 DVENWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVL-RGHLSL 162
Query: 487 VSCVRFSPI 513
V V + PI
Sbjct: 163 VKGVTWDPI 171
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 68 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 169
LRGH V + +P I S S DKT+I+W+
Sbjct: 156 LRGHLSLVKGVTWDP-IGSFIASQSDDKTVIIWR 188
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 432
DG G D +++L KT H V +A S DN +V+GSRD T+ LW
Sbjct: 2637 DGEIITGGHADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSRDSTVLLW 2695
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2
Query: 41 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 172
S+ K T GH VT +A +P + +++ SRD T+++W++
Sbjct: 2655 SDGAKTLETAFGHCAPVTCLALSPDN-NFLVTGSRDSTVLLWRI 2697
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 241 CCAVYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDK 417
C Y + S +++ +++WD+A + ++H K V S+ + S D + SGS D
Sbjct: 540 CWNSYIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDG 599
Query: 418 TIKLWN 435
++KLW+
Sbjct: 600 SVKLWS 605
Score = 31.5 bits (68), Expect = 0.49
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +1
Query: 241 CCAVYDGNYALS---GSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGS 408
CC + S GS D + +DL K H K V V F VD+ +VS S
Sbjct: 622 CCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRF-VDSSTLVSSS 680
Query: 409 RDKTIKLWN 435
D T+KLW+
Sbjct: 681 TDNTLKLWD 689
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 241 CCAVYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDK 417
C Y + S +++ +++WD+A + ++H K V S+ + S D + SGS D
Sbjct: 540 CWNSYIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDG 599
Query: 418 TIKLWN 435
++KLW+
Sbjct: 600 SVKLWS 605
Score = 31.5 bits (68), Expect = 0.49
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +1
Query: 241 CCAVYDGNYALS---GSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGS 408
CC + S GS D + +DL K H K V V F VD+ +VS S
Sbjct: 622 CCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRF-VDSSTLVSSS 680
Query: 409 RDKTIKLWN 435
D T+KLW+
Sbjct: 681 TDNTLKLWD 689
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 41.5 bits (93), Expect = 5e-04
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWD--LAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 429
D + +SGS D +++WD L + + HT V ++ S D +IVSGS D ++ +
Sbjct: 866 DAGFFISGSTDCLVKIWDPSLRGSELRATLKGHTGTVRAI--SSDRGKIVSGSDDLSVIV 923
Query: 430 WNTLAECKYTIQDDGHSDWVSCVR 501
W+ + + GH VSCV+
Sbjct: 924 WDK-QTTQLLEELKGHDSQVSCVK 946
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +1
Query: 286 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTI 462
D +WD+ +GK + + HTK + S+ D +++GS D T ++W+ + C +
Sbjct: 1001 DTVANIWDIRSGKQMHKLKGHTKWIRSIRMVEDT--LITGSDDWTARVWSVSRGSCDAVL 1058
Query: 463 QDDGHSDWVSCVRFSP 510
H+ V V +SP
Sbjct: 1059 A--CHAGPVQSVEYSP 1072
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +2
Query: 53 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 166
+LR TL+GH G V I+++ I+S S D ++IVW
Sbjct: 890 ELRATLKGHTGTVRAISSD---RGKIVSGSDDLSVIVW 924
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 241 CCAVYDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 417
C A+ + L SGSWDKT ++W ++ + H +D ++ S + + +GS D
Sbjct: 216 CLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAH-EDAVNAVVSGFDGLVFTGSADG 274
Query: 418 TIKLWNTLAECKYT 459
T+K+W + K T
Sbjct: 275 TVKVWRREDQAKDT 288
Score = 33.1 bits (72), Expect = 0.16
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1
Query: 346 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCV 498
H + +A S D R + SGS DKT K+W +++ + + H D V+ V
Sbjct: 210 HLDAISCLALSEDKRLLYSGSWDKTFKVWR-VSDLRCVESVNAHEDAVNAV 259
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 41.1 bits (92), Expect = 6e-04
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = +1
Query: 241 CCAVYDGNYALSGSWDKTLRLWDLAAGKTTRRF----EDHTKDVLSVAFSVDNRQIVSGS 408
C DG G D ++++W L G +R + HT D+ SV FS D R ++S S
Sbjct: 333 CAWDRDGKRIAGGVGDGSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRS 392
Query: 409 RDKTIKLWN 435
D ++K+W+
Sbjct: 393 FDGSLKVWD 401
Score = 30.7 bits (66), Expect = 0.85
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRR-FE--DHTKDVLSVAFSVDNRQIVSGS 408
DG LS S+D +L++WDL K + FE + +VAFS D + I++G+
Sbjct: 384 DGRILLSRSFDGSLKVWDLRQMKEALKVFEGLPNYYPQTNVAFSPDEQIILTGT 437
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 41.1 bits (92), Expect = 6e-04
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
DG+ S SWD++ ++W + K E D ++ + + +GS DK IK+WN
Sbjct: 203 DGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKDGFVYTGSADKKIKVWN 262
Score = 37.1 bits (82), Expect = 0.010
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 13/77 (16%)
Frame = +1
Query: 244 CAVYDGNYALSGSWDKTLRLW-----DLAAGKTTRRFEDHTKDVLSVAFSVDNR------ 390
C + LSGS DK+LR+W + E HTK V S+A SV +
Sbjct: 333 CLAVASDLVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKPVKSLAVSVSDSDSNSDY 392
Query: 391 --QIVSGSRDKTIKLWN 435
+ SGS D ++K+WN
Sbjct: 393 SCMVYSGSLDLSLKVWN 409
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = +2
Query: 62 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISD 241
G LRGH + +A D++LS S DK+L VW+ E L GH+ +
Sbjct: 322 GALRGHRKAIMCLAVAS---DLVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKPVKS 378
Query: 242 VVLSMT 259
+ +S++
Sbjct: 379 LAVSVS 384
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 8/67 (11%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWD-LAAG-------KTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 411
DG SG+ D+++ +W+ L G H K ++ +A + D ++SGS
Sbjct: 289 DGKVLYSGACDRSILVWERLINGDDEELHMSVVGALRGHRKAIMCLAVASD--LVLSGSA 346
Query: 412 DKTIKLW 432
DK++++W
Sbjct: 347 DKSLRVW 353
Score = 27.9 bits (59), Expect = 6.0
Identities = 7/37 (18%), Positives = 18/37 (48%)
Frame = +3
Query: 471 WTQRLGVMCQILTNHANPIIVSCGWDRTVKVWHLTNW 581
W + + + + ++ S WDR+ K+W +++
Sbjct: 188 WVHHVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDF 224
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 40.7 bits (91), Expect = 8e-04
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +1
Query: 274 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 453
S SWD T+++W +A K H + SV D+ + +GS D T+K+W + K
Sbjct: 252 SSSWDTTIKVWRIADSKCLESIHAHDDAINSVMSGFDD-LVFTGSADGTVKVWKRELQGK 310
Query: 454 YT 459
T
Sbjct: 311 GT 312
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +1
Query: 346 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCV 498
H V S++ V+ + S S D TIK+W +A+ K H D ++ V
Sbjct: 234 HNDAVSSLSLDVELGLLYSSSWDTTIKVWR-IADSKCLESIHAHDDAINSV 283
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 40.7 bits (91), Expect = 8e-04
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +1
Query: 262 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTI 423
N S S DK +++WD+A G E HTK+V +VA++ ++SGS D+T+
Sbjct: 279 NILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTV 333
Score = 37.5 bits (83), Expect = 0.007
Identities = 19/65 (29%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Frame = +1
Query: 262 NYALSGSWDKTLRLWDLAAGKTT--RRFEDHTKDVLSVAFSVDNRQIVS-GSRDKTIKLW 432
N +GS DK+++LWDL+ + + + + V S++F+VDN +++ G + +W
Sbjct: 418 NLLATGSMDKSVKLWDLSNNEPSCIATHQPNAGAVFSISFAVDNPFLLAIGGSKGELHVW 477
Query: 433 NTLAE 447
+TL +
Sbjct: 478 DTLLD 482
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 40.7 bits (91), Expect = 8e-04
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
DG SG DK ++W L +G H + ++A+ + +GS DKT+K W+
Sbjct: 83 DGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWD 142
Query: 436 T 438
T
Sbjct: 143 T 143
Score = 33.1 bits (72), Expect = 0.16
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Frame = +1
Query: 280 SWDKTLRLWDL-----AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 444
SWD +R W++ + + H + VL A+ D + SG DK K+W L+
Sbjct: 44 SWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLS 103
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/64 (29%), Positives = 39/64 (60%)
Frame = +1
Query: 322 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 501
K F H+ D+L +++S +NR ++S S D +++LW C+ + H+++V+ V+
Sbjct: 347 KPLHEFLGHSGDILDISWSKNNR-LLSASVDNSVRLWQ--IGCEDCLGIFSHNNYVTSVQ 403
Query: 502 FSPI 513
F+P+
Sbjct: 404 FNPV 407
Score = 38.3 bits (85), Expect = 0.004
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +1
Query: 262 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNT 438
N LS S D ++RLW + F H V SV F+ VD+ +SGS D +++W+
Sbjct: 368 NRLLSASVDNSVRLWQIGCEDCLGIFS-HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSA 426
Query: 439 LAECK 453
++C+
Sbjct: 427 -SQCQ 430
Score = 31.9 bits (69), Expect = 0.37
Identities = 18/74 (24%), Positives = 35/74 (47%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
D ++ +SGS D +R+W + + + D V +V + D + ++ G+ + +N
Sbjct: 408 DDDHFISGSIDGKVRIWSASQCQVV-DWADARGIVTAVCYQPDGQAVIIGTLTSDCRFYN 466
Query: 436 TLAECKYTIQDDGH 477
C +Q DGH
Sbjct: 467 VSGHC---LQLDGH 477
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 77 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 178
HN +VT + NP D +S S D + +W ++
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/64 (29%), Positives = 39/64 (60%)
Frame = +1
Query: 322 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 501
K F H+ D+L +++S +NR ++S S D +++LW C+ + H+++V+ V+
Sbjct: 347 KPLHEFLGHSGDILDISWSKNNR-LLSASVDNSVRLWQ--IGCEDCLGIFSHNNYVTSVQ 403
Query: 502 FSPI 513
F+P+
Sbjct: 404 FNPV 407
Score = 38.3 bits (85), Expect = 0.004
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +1
Query: 262 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNT 438
N LS S D ++RLW + F H V SV F+ VD+ +SGS D +++W+
Sbjct: 368 NRLLSASVDNSVRLWQIGCEDCLGIFS-HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSA 426
Query: 439 LAECK 453
++C+
Sbjct: 427 -SQCQ 430
Score = 31.9 bits (69), Expect = 0.37
Identities = 18/74 (24%), Positives = 35/74 (47%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
D ++ +SGS D +R+W + + + D V +V + D + ++ G+ + +N
Sbjct: 408 DDDHFISGSIDGKVRIWSASQCQVV-DWADARGIVTAVCYQPDGQAVIIGTLTSDCRFYN 466
Query: 436 TLAECKYTIQDDGH 477
C +Q DGH
Sbjct: 467 VSGHC---LQLDGH 477
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 77 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 178
HN +VT + NP D +S S D + +W ++
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +1
Query: 259 GNYALSGSWDKTLRLWDLAAGKTTRRFED-HTK-DVLSVAFSVDNRQIVSGSRDKTIKLW 432
G+ ++ S D +RL+D + K R + H K +V S F+ D R ++S +D T+KLW
Sbjct: 186 GSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLW 245
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +1
Query: 259 GNYALSGSWDKTLRLWDLAAGKTTRRFED-HTK-DVLSVAFSVDNRQIVSGSRDKTIKLW 432
G+ ++ S D +RL+D + K R + H K +V S F+ D R ++S +D T+KLW
Sbjct: 278 GSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLW 337
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = +1
Query: 259 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 438
GN ++G D +RL+D GK + H V V F+ SGS D TI++W T
Sbjct: 240 GNKFVAGGEDMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTGESYASGSEDGTIRIWQT 299
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 295 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
+RLWD+ +GK + E + V S S D R I + T+K W+
Sbjct: 170 VRLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD 214
Score = 28.7 bits (61), Expect = 3.4
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
DG + +S S D L + G FE H V S + + S S D + KLW+
Sbjct: 30 DGFFLISASKDSQPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWD 89
Query: 436 TL 441
L
Sbjct: 90 AL 91
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 432
DG A + WD +R+++ G + H +V++S D + S S D T+ LW
Sbjct: 319 DGKIAATAGWDHRIRVYNYRKGNALAILKYHRATCNAVSYSPDCELMASASEDATVALW 377
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 38.7 bits (86), Expect = 0.003
Identities = 23/64 (35%), Positives = 31/64 (48%)
Frame = +1
Query: 244 CAVYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 423
C +D + S D +R D AGK H K V V +S Q+++GS DKTI
Sbjct: 63 CCFHDDSSGFSVCADTKVRRIDFNAGKEDV-LGTHEKPVRCVEYSYAAGQVITGSWDKTI 121
Query: 424 KLWN 435
K W+
Sbjct: 122 KCWD 125
Score = 31.5 bits (68), Expect = 0.49
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 253 YDGNYALSGSWDKTLRLWDLAAGKTTRR 336
Y ++GSWDKT++ WD T R
Sbjct: 107 YAAGQVITGSWDKTIKCWDPRGASGTER 134
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN 387
+ ++ L SWDK++RL+D A G R H VL F D+
Sbjct: 27 NSDHLLVSSWDKSVRLYD-ANGDLMRGEFKHGGAVLDCCFHDDS 69
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 38.3 bits (85), Expect = 0.004
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDH---TKDVLSVAFSVDNRQIVSGSRDKTIK 426
DG +GS D +L +W+ ++ + H T+ + + + ++ +SGS+D ++
Sbjct: 208 DGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVH 267
Query: 427 LWNTLAECKYTIQDDGHSDWVSCVRFSPIMPT 522
+ N + K + H+D V CV+FSP T
Sbjct: 268 IVNIVTG-KVVSSLNSHTDSVECVKFSPSSAT 298
Score = 36.7 bits (81), Expect = 0.013
Identities = 21/89 (23%), Positives = 36/89 (40%)
Frame = +1
Query: 244 CAVYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 423
C+ D +G D LW + G H V +AFS D + + SG D +
Sbjct: 78 CSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVV 137
Query: 424 KLWNTLAECKYTIQDDGHSDWVSCVRFSP 510
++++ + + DG + VR+ P
Sbjct: 138 QIFDASSGTLKCVL-DGPGAGIEWVRWHP 165
Score = 34.3 bits (75), Expect = 0.069
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI---VSGSRDKTIK 426
+ + A+SGS D ++ + ++ GK HT V V FS + I +G DK +
Sbjct: 253 NSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLI 312
Query: 427 LWN 435
+W+
Sbjct: 313 IWD 315
Score = 31.5 bits (68), Expect = 0.49
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +1
Query: 265 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 438
Y +G + T+ +WD G + H V +++ S + IVS S D T +++ +
Sbjct: 342 YLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARVFES 399
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 37.9 bits (84), Expect = 0.006
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Frame = +1
Query: 286 DKTLRLWDL---AAGKTTRRFEDHTKDVLSVAFSVDNRQIVS-GSRDKTIKLWN--TLAE 447
D+ L +WDL +A K + H+ +V +AF+ N +V+ GS DKT+KL++ L+
Sbjct: 249 DQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLST 308
Query: 448 CKYTIQDDGHSDWVSCVRFSPIMPTPLLYPVVGTEL 555
+T D H + V V ++P T L +G L
Sbjct: 309 ALHTF--DSHKEEVFQVGWNPKNETILASCCLGRRL 342
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 65 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 178
T H V Q+ NPK ++ S + L+VW L+R
Sbjct: 312 TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 37.9 bits (84), Expect = 0.006
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +1
Query: 331 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFS 507
++ H+KDV FS +N+ I S S DKTI++W + C I G S C+RF
Sbjct: 210 KQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVIY--GISPQY-CIRFH 266
Query: 508 PI 513
P+
Sbjct: 267 PV 268
Score = 31.9 bits (69), Expect = 0.37
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
+ Y S S DKT+R+W+L+ G R + V+N + +G+ +K + ++N
Sbjct: 227 NNQYIASSSLDKTIRVWELSRGVCIRVIYGISPQYCIRFHPVNNNFLSAGNANKELTVFN 286
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +2
Query: 68 LRGHNGWVTQI--ATNPKYPDMILSSSRDKTLIVWKLTR 178
L GH+ VT ++N +Y I SSS DKT+ VW+L+R
Sbjct: 212 LTGHSKDVTDFDFSSNNQY---IASSSLDKTIRVWELSR 247
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 37.5 bits (83), Expect = 0.007
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +1
Query: 328 TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD---DGHSDWVSCV 498
+R ++ H K V SVA++ + ++ SGS D+T ++WN +D GH+D V +
Sbjct: 13 SREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQL 72
Query: 499 RFSP 510
+ P
Sbjct: 73 CWDP 76
Score = 35.9 bits (79), Expect = 0.023
Identities = 15/52 (28%), Positives = 31/52 (59%)
Frame = +1
Query: 274 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 429
+ S DK++RLWD +GK T++ E +++ ++ + D + G+RD + +
Sbjct: 84 TASGDKSVRLWDARSGKCTQQVELSGENI-NITYKPDGTHVAVGNRDDELTI 134
Score = 33.9 bits (74), Expect = 0.092
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +2
Query: 68 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 166
L+GH V Q+ +PK+ D++ ++S DK++ +W
Sbjct: 62 LKGHTDSVDQLCWDPKHSDLVATASGDKSVRLW 94
Score = 31.9 bits (69), Expect = 0.37
Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTR----RFEDHTKDVLSVAFSVDNRQIV-SGSRDKT 420
+G SGS D+T R+W++ ++ + HT V + + + +V + S DK+
Sbjct: 31 NGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPKHSDLVATASGDKS 90
Query: 421 IKLWNTLA-ECKYTIQDDGHS 480
++LW+ + +C ++ G +
Sbjct: 91 VRLWDARSGKCTQQVELSGEN 111
Score = 31.9 bits (69), Expect = 0.37
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +1
Query: 259 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
G Y GS D + LWD++ R F V +++F+ I S S D I + N
Sbjct: 203 GRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISFNYSGEYIASASEDLFIDIAN 261
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 37.5 bits (83), Expect = 0.007
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +1
Query: 274 SGSWDKTLRLWDLAAGKT-TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 450
SGS DK++ D+ + + H +V + +S DNR++ SG D + +WN
Sbjct: 309 SGSRDKSILQRDIRCQEDHVSKLAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQ-HST 367
Query: 451 KYTIQDDGHSDWVSCVRFSP 510
+ ++ H+ V + +SP
Sbjct: 368 QPVLKYSEHTAAVKAIAWSP 387
Score = 36.7 bits (81), Expect = 0.013
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +1
Query: 253 YDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS---GSRDKTI 423
YD SG D L +W+ + + ++ +HT V ++A+S +++ G+ D+ I
Sbjct: 345 YDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPHVHGLLASGGGTADRCI 404
Query: 424 KLWNT 438
+ WNT
Sbjct: 405 RFWNT 409
Score = 34.3 bits (75), Expect = 0.069
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 346 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 453
HT VL +A S D + IV+G+ D+T++ WN K
Sbjct: 464 HTYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPK 499
Score = 32.3 bits (70), Expect = 0.28
Identities = 22/83 (26%), Positives = 41/83 (49%)
Frame = +1
Query: 259 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 438
G + G+ +++WD + K TR E H V ++A+ + + SGSRDK+I +
Sbjct: 264 GTHLAVGTSTGKVQIWDASRCKRTRTMEGHRLRVGALAWG--SSVLSSGSRDKSILQRDI 321
Query: 439 LAECKYTIQDDGHSDWVSCVRFS 507
+ + + GH V +++S
Sbjct: 322 RCQEDHVSKLAGHKSEVCGLKWS 344
>At1g80710.1 68414.m09470 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to damage-specific DNA-binding protein 2 (DDB2)
[Mus musculus]
Length = 516
Score = 37.5 bits (83), Expect = 0.007
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +1
Query: 301 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWNTL---AECKYTIQD 468
+WDL AGK+ +E H + + S+ F+ N ++ + S D T LW+ A+ T+
Sbjct: 332 VWDLRAGKSVFHWELHERRINSIDFNPQNPHVMATSSTDGTACLWDLRSMGAKKPKTLST 391
Query: 469 DGHSDWVSCVRFSP 510
HS V FSP
Sbjct: 392 VNHSRAVHSAYFSP 405
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 37.1 bits (82), Expect = 0.010
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Frame = +1
Query: 259 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHT------KDVLSVAFSVDNRQIVSGSRDKT 420
G SG+ L +W L +T + ++ H KDVL + +S D+ ++SGS D +
Sbjct: 76 GELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNS 135
Query: 421 IKLWNTLAECKYTIQDDGHSDWVSCVRFSPI 513
+W+ + I D H +V V + P+
Sbjct: 136 CIIWDVNKGSVHQIL-DAHCHYVQGVAWDPL 165
Score = 34.7 bits (76), Expect = 0.052
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
D Y +SGS D + +WD+ G + + H V VA+ + + S S D+T +++
Sbjct: 123 DDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIYA 182
Query: 436 TLAECK 453
+ K
Sbjct: 183 NKPQTK 188
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 37.1 bits (82), Expect = 0.010
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Frame = +1
Query: 259 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHT------KDVLSVAFSVDNRQIVSGSRDKT 420
G SG+ L +W L +T + ++ H KDVL + +S D+ ++SGS D +
Sbjct: 76 GELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNS 135
Query: 421 IKLWNTLAECKYTIQDDGHSDWVSCVRFSPI 513
+W+ + I D H +V V + P+
Sbjct: 136 CIIWDVNKGSVHQIL-DAHCHYVQGVAWDPL 165
Score = 34.7 bits (76), Expect = 0.052
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
D Y +SGS D + +WD+ G + + H V VA+ + + S S D+T +++
Sbjct: 123 DDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIYA 182
Query: 436 TLAECK 453
+ K
Sbjct: 183 NKPQTK 188
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 37.1 bits (82), Expect = 0.010
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = +1
Query: 262 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 432
N SGS DKT+++W L + + DH+ V+S+ ++ ++S S D T+K+W
Sbjct: 285 NRLYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSLI--CWDQFLLSCSLDNTVKIW 339
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +1
Query: 274 SGSWDKTLRLWDLAAGKTT 330
+GS D+TLR+WD A+G+ T
Sbjct: 168 TGSKDETLRVWDCASGQCT 186
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2
Query: 44 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 166
E+ L L GH V+ IA P D + + S+D+TL VW
Sbjct: 139 ESFALLTQLDGHEKLVSGIAL-PSGSDKLYTGSKDETLRVW 178
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 367 VAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQD 468
V V ++ SGS DKTIK+W+ +C T+ D
Sbjct: 278 VTLYVGANRLYSGSMDKTIKVWSLDNLQCIQTLTD 312
Score = 27.5 bits (58), Expect = 7.9
Identities = 9/34 (26%), Positives = 22/34 (64%)
Frame = +1
Query: 334 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
+ + H K V +A + ++ +GS+D+T+++W+
Sbjct: 146 QLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWD 179
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 36.7 bits (81), Expect = 0.013
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +1
Query: 259 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD---VLSVAFSVDNRQIVSGSRDKTIKL 429
G ++GS+D+++R++ G + + HTK V V +S D ++SGS D ++L
Sbjct: 291 GREFVTGSYDRSVRIFPYNGGHSREIY--HTKRMQRVFCVKYSCDATYVISGSDDTNLRL 348
Query: 430 WNTLA 444
W A
Sbjct: 349 WKAKA 353
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 62 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 175
G + GH V+ +A NP Y I S+S D + +W ++
Sbjct: 50 GAMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDIS 87
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 196 YTSKAFIRSFALHF*CCAVYDGNYALSGSWDKTLRLWDLAAGK 324
Y +K R F + + C D Y +SGS D LRLW A +
Sbjct: 317 YHTKRMQRVFCVKYSC----DATYVISGSDDTNLRLWKAKASE 355
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 36.3 bits (80), Expect = 0.017
Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +1
Query: 286 DKTLRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYT 459
D T+ LWD + G T+ ++ V S+ ++ D R + G + ++LW++ + +
Sbjct: 159 DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLR 218
Query: 460 IQDDGHSDWVSCVRFS 507
GH V + ++
Sbjct: 219 TLKGGHQSRVGSLAWN 234
Score = 35.9 bits (79), Expect = 0.023
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 9/69 (13%)
Frame = +1
Query: 259 GNYALSGSWDKTLRLWD---LAAGKTTR---RFEDHTKDVLSVAFSVDNRQIVS---GSR 411
G SG D + +WD ++ TT+ R E+HT V ++A+ +++ G
Sbjct: 278 GQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGG 337
Query: 412 DKTIKLWNT 438
D+TIK WNT
Sbjct: 338 DRTIKFWNT 346
Score = 31.9 bits (69), Expect = 0.37
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +1
Query: 277 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
G L LW + HT VL +A S D + S + D+T++ WN
Sbjct: 378 GFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWN 430
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 337 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ 465
+ HT++V + +S +Q+ SG D + +W+ ++A T Q
Sbjct: 262 YRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQ 305
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 36.3 bits (80), Expect = 0.017
Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +1
Query: 286 DKTLRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYT 459
D T+ LWD + G T+ ++ V S+ ++ D R + G + ++LW++ + +
Sbjct: 149 DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLR 208
Query: 460 IQDDGHSDWVSCVRFS 507
GH V + ++
Sbjct: 209 TLKGGHQSRVGSLAWN 224
Score = 35.9 bits (79), Expect = 0.023
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 9/69 (13%)
Frame = +1
Query: 259 GNYALSGSWDKTLRLWD---LAAGKTTR---RFEDHTKDVLSVAFSVDNRQIVS---GSR 411
G SG D + +WD ++ TT+ R E+HT V ++A+ +++ G
Sbjct: 268 GQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGG 327
Query: 412 DKTIKLWNT 438
D+TIK WNT
Sbjct: 328 DRTIKFWNT 336
Score = 31.9 bits (69), Expect = 0.37
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +1
Query: 277 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
G L LW + HT VL +A S D + S + D+T++ WN
Sbjct: 368 GFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWN 420
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 337 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ 465
+ HT++V + +S +Q+ SG D + +W+ ++A T Q
Sbjct: 252 YRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQ 295
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 36.3 bits (80), Expect = 0.017
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 274 SGSWDKTLRLWDLAAGKT-TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
SGS DK++ D+ + + + H ++ + +S DNR++ SG D + +WN
Sbjct: 266 SGSRDKSILQRDIRTQEDHVSKLKGHKSEICGLKWSSDNRELASGGNDNKLFVWN 320
Score = 34.7 bits (76), Expect = 0.052
Identities = 22/83 (26%), Positives = 42/83 (50%)
Frame = +1
Query: 259 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 438
G + G+ T+++WD+ K R E H V ++A+S + + SGSRDK+I +
Sbjct: 221 GTHLAIGTSSGTVQIWDVLRCKNIRTMEGHRLRVGALAWS--SSVLSSGSRDKSILQRDI 278
Query: 439 LAECKYTIQDDGHSDWVSCVRFS 507
+ + + GH + +++S
Sbjct: 279 RTQEDHVSKLKGHKSEICGLKWS 301
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 346 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 453
H+ VL +A S D + IV+G+ D+T++ WN K
Sbjct: 421 HSYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPK 456
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 36.3 bits (80), Expect = 0.017
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +1
Query: 337 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAECKYTIQDDGHSDWVSCVRFSPI 513
++ HT V S++ I SGS D ++++W C Q D + + CV ++P+
Sbjct: 419 YKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFD---EAIMCVAWNPL 475
Query: 514 MPTPLLYPVVGTEL 555
P+L +G +L
Sbjct: 476 SRLPVLAVAMGRDL 489
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 36.3 bits (80), Expect = 0.017
Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
Frame = +1
Query: 241 CCAVYDGNYALSGSWDKTLRLWDLAAGK--TTRRFEDHTKDVLSVAFSVDNRQIVSGSRD 414
C G + S+D T +W + E H +V SV+++ + + SRD
Sbjct: 80 CAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSRD 139
Query: 415 KTIKLWNTLAECKYTIQD--DGHSDWVSCVRFSPIM 516
K++ +W L +Y GH+ V V++ P M
Sbjct: 140 KSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTM 175
Score = 33.5 bits (73), Expect = 0.12
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Frame = +1
Query: 274 SGSWDKTLRLWD---LAAGKTTRRF--EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 438
S S D T+R+W+ L+ T + E HT+ V S A+S + + + S D T +W
Sbjct: 44 SCSGDNTVRIWEQSSLSRSWTCKTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIWKN 103
Query: 439 LA---ECKYTIQDDGHSDWVSCVRFS 507
EC T+ +GH + V V ++
Sbjct: 104 YGSEFECISTL--EGHENEVKSVSWN 127
Score = 30.3 bits (65), Expect = 1.1
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Frame = +1
Query: 259 GNYALSGSWDKTLRLWDLAAGKT---TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 429
G+ + S DK++ +W++ G HT+DV V + + S S D TIK+
Sbjct: 130 GSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKV 189
Query: 430 W-----NTLAECKYTI--QDDGHSDWVSCVRFS 507
W + +C T+ ++GHS V + F+
Sbjct: 190 WWSEDDDGEYQCVQTLGESNNGHSSTVWSISFN 222
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +1
Query: 346 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 438
H+ V S++F+ ++V+ S D T+K+W T
Sbjct: 212 HSSTVWSISFNAAGDKMVTCSDDLTLKIWGT 242
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 36.3 bits (80), Expect = 0.017
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
D N G D T++++++ + + + H+K + +AFS +VS D + +WN
Sbjct: 877 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 936
Query: 436 T 438
T
Sbjct: 937 T 937
Score = 34.3 bits (75), Expect = 0.069
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 286 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIKLW 432
DKT+++WD A G FE H V S+ + + + I S + D IK W
Sbjct: 485 DKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAW 535
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 36.3 bits (80), Expect = 0.017
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
D N G D T++++++ + + + H+K + +AFS +VS D + +WN
Sbjct: 877 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 936
Query: 436 T 438
T
Sbjct: 937 T 937
Score = 34.3 bits (75), Expect = 0.069
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 286 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIKLW 432
DKT+++WD A G FE H V S+ + + + I S + D IK W
Sbjct: 485 DKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAW 535
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 36.3 bits (80), Expect = 0.017
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
D N G D T++++++ + + + H+K + +AFS +VS D + +WN
Sbjct: 888 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 947
Query: 436 T 438
T
Sbjct: 948 T 948
Score = 35.5 bits (78), Expect = 0.030
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 286 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIKLW 432
DKT+++WD A G FE H V SV + + + I S + D IK W
Sbjct: 485 DKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAW 535
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +1
Query: 295 LRLWDLAAGKTTRR---FEDHTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTLAECK 453
++L+ G+ R+ + H V ++FS N+Q +++ DKTIK+W+ K
Sbjct: 441 VQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVK 498
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 36.3 bits (80), Expect = 0.017
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
D N G D T++++++ + + + H+K + +AFS +VS D + +WN
Sbjct: 888 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 947
Query: 436 T 438
T
Sbjct: 948 T 948
Score = 35.5 bits (78), Expect = 0.030
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 286 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIKLW 432
DKT+++WD A G FE H V SV + + + I S + D IK W
Sbjct: 485 DKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAW 535
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +1
Query: 295 LRLWDLAAGKTTRR---FEDHTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTLAECK 453
++L+ G+ R+ + H V ++FS N+Q +++ DKTIK+W+ K
Sbjct: 441 VQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVK 498
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 35.9 bits (79), Expect = 0.023
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = +1
Query: 322 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 501
K + H KDVL + +S D+ ++SGS D + +W+ + I D H +V V
Sbjct: 44 KVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQIL-DAHCHYVQGVA 102
Query: 502 FSPI 513
+ P+
Sbjct: 103 WDPL 106
Score = 34.7 bits (76), Expect = 0.052
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
D Y +SGS D + +WD+ G + + H V VA+ + + S S D+T +++
Sbjct: 64 DDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIYA 123
Query: 436 TLAECK 453
+ K
Sbjct: 124 NKPQTK 129
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 35.9 bits (79), Expect = 0.023
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLW 432
DG S D T+++ D G + H + V F + +IV SGS D ++LW
Sbjct: 117 DGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWVVRFHPHHSEIVASGSLDLEVRLW 176
Query: 433 N-TLAEC 450
N T +EC
Sbjct: 177 NTTTSEC 183
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +1
Query: 352 KDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSP 510
+ ++ AFS D R + S D T+K+ + C + + WV VRF P
Sbjct: 107 RSTIAAAFSTDGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWV--VRFHP 158
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 35.9 bits (79), Expect = 0.023
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +1
Query: 277 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 447
G L LW + HT VL +A S D + S + D+T++LWN E
Sbjct: 348 GFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGE 404
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 346 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ 465
HT++V + +S +++ SG D + +W+ +LA T Q
Sbjct: 235 HTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQ 275
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 35.9 bits (79), Expect = 0.023
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +1
Query: 277 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 447
G L LW + HT VL +A S D + S + D+T++LWN E
Sbjct: 331 GFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGE 387
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/74 (20%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +1
Query: 292 TLRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 465
T+ LWD ++G T + ++ V S+ ++ D + G + ++LW+ ++ +
Sbjct: 113 TVYLWDASSGSTYKLVTIDEEEGPVTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQVRTL 172
Query: 466 DDGHSDWVSCVRFS 507
GH V + ++
Sbjct: 173 RGGHESRVGSLAWN 186
Score = 27.9 bits (59), Expect = 6.0
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = +1
Query: 346 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
HT++V + +S +++ SG D + +W+
Sbjct: 217 HTEEVCGLKWSESGKKLASGGNDNVVHIWD 246
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 35.9 bits (79), Expect = 0.023
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 295 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 453
+ LW + H+ VL +A S D + IV+G+ D+T++ WN K
Sbjct: 410 IMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNVFPSVK 462
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +1
Query: 274 SGSWDKTLRLWDLAAGKT-TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 450
SGS D+ + D+ + H +V + +S D+R++ SG D + +WN ++
Sbjct: 272 SGSRDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQ- 330
Query: 451 KYTIQDDGHSDWVSCVRFSP 510
+ ++ H+ V + +SP
Sbjct: 331 QPILKLTEHTAAVKAITWSP 350
Score = 32.3 bits (70), Expect = 0.28
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +1
Query: 253 YDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS---GSRDKTI 423
+D SG D L +W+ + + + +HT V ++ +S +++ G+ D+ I
Sbjct: 308 HDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQSSLLASGGGTADRCI 367
Query: 424 KLWNT 438
+ WNT
Sbjct: 368 RFWNT 372
Score = 28.3 bits (60), Expect = 4.5
Identities = 20/84 (23%), Positives = 39/84 (46%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
+G+Y G+ +++WD K R H +A++ +R + SGSRD+ I +
Sbjct: 226 EGSYISIGTSHGQVQVWDGTQCKRVRTMGGHQTRTGVLAWN--SRILSSGSRDRNILQHD 283
Query: 436 TLAECKYTIQDDGHSDWVSCVRFS 507
+ + + GH V +++S
Sbjct: 284 IRVQSDFVSKLVGHKSEVCGLKWS 307
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 35.9 bits (79), Expect = 0.023
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 301 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNR-QIVSGSRDKTIKLWNTLAECKYTIQDDGH 477
+WD +G F+ H++ VLS A +IV+ D + + K+ + H
Sbjct: 130 MWD--SGSNVGEFDGHSRRVLSCAIKPTRPFRIVTCGEDFLVNFYEG-PPFKFKLSSREH 186
Query: 478 SDWVSCVRFSP 510
S++V+CVRF+P
Sbjct: 187 SNFVNCVRFAP 197
Score = 30.3 bits (65), Expect = 1.1
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = +1
Query: 340 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
+ H + +V++S D +Q+++ S DK+ K+W+
Sbjct: 229 DGHKGSIYAVSWSPDGKQVLTVSADKSAKIWD 260
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 35.9 bits (79), Expect = 0.023
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +1
Query: 265 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
+ +GS D T++ W L G H K V+S V N + SGS D T++LW+
Sbjct: 599 HVYTGSGDNTIKAWSLQDGSLLCTMSGH-KSVVSTLVVV-NGVLYSGSWDGTVRLWS 653
Score = 32.7 bits (71), Expect = 0.21
Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 16/81 (19%)
Frame = +1
Query: 274 SGSWDKTLRLWDLAAGKTTRRFEDHT------KDVLSVAFSVDNRQIVS----------G 405
SGSWD T+RLW L+ + T D L + + N I+S G
Sbjct: 642 SGSWDGTVRLWSLSDNSLLTVLGEETPGIIWRDDTLMKSMKIQNGAILSIAVNGKWLFTG 701
Query: 406 SRDKTIKLWNTLAECKYTIQD 468
DKTI + L K +QD
Sbjct: 702 GWDKTINVQGNLGRLKRNVQD 722
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 35.5 bits (78), Expect = 0.030
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 250 VYDGNYALSGSWDKTLRLWDLAAGKTTRRFE--DHTKDVLSVAFSVDNRQIVSGSRDKTI 423
+Y SG D ++R+W++ T ++ +H V + S ++SGS DKTI
Sbjct: 860 IYHKGLLFSGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSLSETGECVLSGSADKTI 919
Query: 424 KLW 432
++W
Sbjct: 920 RVW 922
Score = 31.1 bits (67), Expect = 0.65
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +1
Query: 259 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD 357
G LSGS DKT+R+W + GK TKD
Sbjct: 907 GECVLSGSADKTIRVWQIVKGKLECAEVIKTKD 939
>At2g47790.1 68415.m05965 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; The first 3 exons are
identical to that of GB:AJ224957. This gene appears to
be a truncated version of that in GB:AJ224957; contains
4 WD-40 repeats (PF00400)
Length = 392
Score = 35.5 bits (78), Expect = 0.030
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +1
Query: 274 SGSWDKTLRLWDLAAGKTTRRFED-HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 450
S S D T+R WD + + R + + +++ S ++ +++G + + LW+
Sbjct: 104 SCSSDGTIRSWDTRSFQQVSRIDTGNDQEIFSFSYGGAADNLLAGGCKEQVLLWDWRNSK 163
Query: 451 KYTIQDDGHSDWVSCVRFSPIMPTPLL 531
+ ++ H D V+ V F P P LL
Sbjct: 164 QVACLEESHMDDVTQVHFVPNKPNKLL 190
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 35.5 bits (78), Expect = 0.030
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 432
D S SWD+T+++W + K + H V SV + + +GS D T+K+W
Sbjct: 146 DQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSV--TTAESLVFTGSADGTVKVW 202
Score = 28.3 bits (60), Expect = 4.5
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 525 IIVSCGWDRTVKVWHL 572
++ S WDRTVKVW +
Sbjct: 149 LLYSASWDRTVKVWRI 164
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 35.5 bits (78), Expect = 0.030
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLW 432
DG S D T+++ D GK + H + V F + +IV SGS D ++LW
Sbjct: 114 DGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLW 173
Query: 433 NT-LAEC 450
N EC
Sbjct: 174 NAKTGEC 180
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 274 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
SGS D +RLW+ G+ R D + + S+AF + S K + +W+
Sbjct: 163 SGSLDHEVRLWNAKTGECIRT-HDFYRPIASIAFHAGGELLAVASGHK-LHIWH 214
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 352 KDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSP 510
+ ++ AFS D R + S D T+K+ + +C + + WV VRF P
Sbjct: 104 RSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWV--VRFHP 155
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 35.5 bits (78), Expect = 0.030
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLW 432
DG S D T+++ D GK + H + V F + +IV SGS D ++LW
Sbjct: 114 DGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLW 173
Query: 433 NT-LAEC 450
N EC
Sbjct: 174 NAKTGEC 180
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 274 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
SGS D +RLW+ G+ R D + + S+AF + S K + +W+
Sbjct: 163 SGSLDHEVRLWNAKTGECIRT-HDFYRPIASIAFHAGGELLAVASGHK-LHIWH 214
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 352 KDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSP 510
+ ++ AFS D R + S D T+K+ + +C + + WV VRF P
Sbjct: 104 RSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWV--VRFHP 155
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 35.1 bits (77), Expect = 0.040
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Frame = +1
Query: 130 LIFLSRQNSHRVEADQRRKQLRYT---SKAFIRSFALHF*CCAVYDGNYALSGSWDKTLR 300
L+ S +S R+ KQL+ T R H + Y L S ++LR
Sbjct: 39 LVTSSEDDSLRLFDIANAKQLKITYHKKHGTDRVCFTHHPSSLICSSRYNLE-STGESLR 97
Query: 301 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
+ + R F+ H V+S+ S N +SGS D++++LW+
Sbjct: 98 YLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWD 142
Score = 31.5 bits (68), Expect = 0.49
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 408
DG Y LSGS D TL W++ R+E++ V + ++ V+ S
Sbjct: 255 DGKYVLSGSGDGTLHAWNIENPSEVARWENNIGVVSCLKWAPRRAMFVAAS 305
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 361 LSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 510
+ F+ D + ++SGS D T+ WN + + + + VSC++++P
Sbjct: 248 IEATFTPDGKYVLSGSGDGTLHAWN-IENPSEVARWENNIGVVSCLKWAP 296
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 35.1 bits (77), Expect = 0.040
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +1
Query: 331 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 510
+ E H V ++A++ + ++SGS D I +WN + D GH+ + C +F P
Sbjct: 44 QELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVP 103
Query: 511 IMPTPLLYPVVG-TELSRSGIS-LTGKLQD 594
L+ G E+ S L+G+ +D
Sbjct: 104 ETSDELVVSGAGDAEVRLFNTSRLSGRAED 133
Score = 34.3 bits (75), Expect = 0.069
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFE-DHTKDVLSVAF--SVDNRQIVSGSRDKTIK 426
+G+ +SGS D + +W+ ++ K + HT ++ F + +VSG+ D ++
Sbjct: 61 NGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPETSDELVVSGAGDAEVR 120
Query: 427 LWNT 438
L+NT
Sbjct: 121 LFNT 124
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 35.1 bits (77), Expect = 0.040
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
Frame = +1
Query: 244 CAVYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV-DNRQIVSGSRDKT 420
C DG + ++++D+ R H+ V + V D +VSG D
Sbjct: 100 CFRSDGALFAACDLSGVVQVFDIKERMALRTLRSHSAPARFVKYPVQDKLHLVSGGDDGV 159
Query: 421 IKLWNTLAECKYTIQDD--GHSDWVSCVRFSPIMPTPLL 531
+K W+ T+ D GH D+V C SP+ + L+
Sbjct: 160 VKYWDVAGA---TVISDLLGHKDYVRCGDCSPVNDSMLV 195
Score = 35.1 bits (77), Expect = 0.040
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +1
Query: 250 VYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIK 426
V D + +SG D ++ WD+A H V S V++ +V+GS D T+K
Sbjct: 145 VQDKLHLVSGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVK 204
Query: 427 LWNTLAECKYTIQDDGHSDWVSCVRFSP 510
+W+ I + H V V + P
Sbjct: 205 VWDARVHTSNWIAEINHGLPVEDVVYLP 232
Score = 31.9 bits (69), Expect = 0.37
Identities = 17/87 (19%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +1
Query: 244 CAVYDGNYALSGSWDKTLRLWDLAAGKTTRRFE-DHTKDVLSVAFSVDNRQIVSGSRDKT 420
C+ + + ++GS+D T+++WD + E +H V V + + + +++ + +
Sbjct: 186 CSPVNDSMLVTGSYDHTVKVWDARVHTSNWIAEINHGLPVEDVVY-LPSGGLIATAGGNS 244
Query: 421 IKLWNTLAECKYTIQDDGHSDWVSCVR 501
+K+W+ + K + H+ V+ +R
Sbjct: 245 VKVWDLIGGGKMVCSMESHNKTVTSLR 271
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 35.1 bits (77), Expect = 0.040
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 286 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
D WD+ +GK F+ H+ + +V QI++GS D T ++W+
Sbjct: 180 DSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWD 229
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 34.7 bits (76), Expect = 0.052
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +1
Query: 274 SGSWDKTLRLWDLAAGK-TTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL--A 444
S SWD ++R WD+ GK + F + + V + I +G D +++W+
Sbjct: 288 SSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVG-GESSALIAAGGSDPILRVWDPRKPG 346
Query: 445 ECKYTIQDDGHSDWVSCVRF 504
Q HS W+S ++
Sbjct: 347 TSAPVFQFSSHSSWISACKW 366
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 34.7 bits (76), Expect = 0.052
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +1
Query: 274 SGSWDKTLRLWDLAAGK-TTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL--A 444
S SWD ++R WD+ GK + F + + V + I +G D +++W+
Sbjct: 288 SSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVG-GESSALIAAGGSDPILRVWDPRKPG 346
Query: 445 ECKYTIQDDGHSDWVSCVRF 504
Q HS W+S ++
Sbjct: 347 TSAPVFQFSSHSSWISACKW 366
Score = 31.1 bits (67), Expect = 0.65
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +1
Query: 265 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 444
+ LS S+D + LWDL + H VLS + +VSG D +++ + +A
Sbjct: 373 HLLSASYDGKIMLWDLRTAWPLSVIDTHNDKVLSADW-WKGESVVSGGADSNLRISSGIA 431
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 34.7 bits (76), Expect = 0.052
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 286 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQ-IVSGSRDKTIKLW 432
DKT+++WD G FE H V SV +N Q I S + D IK W
Sbjct: 487 DKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW 537
Score = 30.7 bits (66), Expect = 0.85
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
D N G D +++++++ + + + H K V +AFS +VS D + +W+
Sbjct: 898 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWS 957
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +1
Query: 346 HTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTL 441
H +V +AFS N+Q +V+ DKTIK+W+ +
Sbjct: 463 HAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAV 496
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 34.7 bits (76), Expect = 0.052
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 286 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQ-IVSGSRDKTIKLW 432
DKT+++WD G FE H V SV +N Q I S + D IK W
Sbjct: 487 DKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW 537
Score = 30.7 bits (66), Expect = 0.85
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
D N G D +++++++ + + + H K V +AFS +VS D + +W+
Sbjct: 898 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWS 957
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +1
Query: 346 HTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTL 441
H +V +AFS N+Q +V+ DKTIK+W+ +
Sbjct: 463 HAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAV 496
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 34.7 bits (76), Expect = 0.052
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +2
Query: 65 TLRGHNGWVTQIA-TNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISD 241
TL GH G V Q+A +PK+ ++ S S D +I+WK E N + + +H +D
Sbjct: 51 TLTGHRGPVWQVAWAHPKFGSLLASCSYDGQIILWK----EGN-----QNQWTQAHVFTD 101
Query: 242 VVLSMTVITHFP-VLGTRLCVCGIS 313
+S+ I P LG L CG S
Sbjct: 102 HKVSVNSIAWAPHELGLSL-ACGAS 125
Score = 28.7 bits (61), Expect = 3.4
Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 12/126 (9%)
Frame = +1
Query: 244 CAVYDGNYAL-----SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR--QIVS 402
C DGN ++ G WD T G T+ + T+ V+ + + ++ S
Sbjct: 122 CGASDGNISVFSARADGGWDTTKIDQAHPVGVTSVSWAPATEPGALVSSGMIDPVYKLAS 181
Query: 403 GSRDKTIKLW-----NTLAECKYTIQDDGHSDWVSCVRFSPIMPTPLLYPVVGTELSRSG 567
G D T+K+W + +C + H+DWV V ++P + P G+E +
Sbjct: 182 GGCDSTVKVWKFSNGSWKMDCFPALNK--HTDWVRDVAWAPNLGLPKSTIASGSEDGKVI 239
Query: 568 ISLTGK 585
I GK
Sbjct: 240 IWTIGK 245
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 34.3 bits (75), Expect = 0.069
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +1
Query: 262 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 408
N LSG +LRLWD+ A K + +L V F +Q +S S
Sbjct: 260 NVFLSGGSKGSLRLWDIRANKFVHEYVRDLGPILDVEFIAGGKQFISSS 308
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 34.3 bits (75), Expect = 0.069
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFED-HTKDVLSVAFS--VDNRQIVSGSRDKTIK 426
DG+ LSGS D+ + LWD F+ H ++ F D+R IV+ + DK ++
Sbjct: 66 DGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMPFSDDRTIVTSAADKQVR 125
Score = 32.7 bits (71), Expect = 0.21
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +1
Query: 331 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 510
++ + H V +V+F+ D ++SGS D+ + LW+ D GH + + +F P
Sbjct: 49 KKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMP 108
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 34.3 bits (75), Expect = 0.069
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +1
Query: 334 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 510
+ H V +V F+ +VSGS D+ I LWN L+ + GH + V +F P
Sbjct: 50 KLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIP 108
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +1
Query: 259 GNYALSGSWDKTLRLWDLAAGKTTRRF-EDHTKDVLSVAF--SVDNRQIVSGSRDKTIKL 429
G+ +SGS D+ + LW+ +G + H ++V F D+R I++ D ++L
Sbjct: 67 GDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPFTDDRTIITSGADGQVRL 126
Query: 430 WNTLAECK 453
L K
Sbjct: 127 GQILENGK 134
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 34.3 bits (75), Expect = 0.069
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2
Query: 56 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ 205
LR RGH+ VT +A + DM+ S S D + VWK++ PQ
Sbjct: 194 LRSLFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQ 243
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 34.3 bits (75), Expect = 0.069
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2
Query: 56 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ 205
LR RGH+ VT +A + DM+ S S D + VWK++ PQ
Sbjct: 229 LRSLFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQ 278
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 34.3 bits (75), Expect = 0.069
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 426
DG +G DK ++W L +G H +A+ +V+GS DKT+K
Sbjct: 84 DGTTVFTGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQIAWIPGMNLLVTGSWDKTLK 140
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 33.9 bits (74), Expect = 0.092
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 241 CCAVYDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDK 417
C Y + S ++D +++WD+A + ++H K V S+ S D + SGS D
Sbjct: 590 CWNSYIKSQIASSNFDGVVQIWDVARSQLVTEMKEHKKRVWSIDISSADPTLLASGSDDG 649
Query: 418 T 420
T
Sbjct: 650 T 650
Score = 33.5 bits (73), Expect = 0.12
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = +1
Query: 241 CCAVY--DGNYALS-GSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGS 408
CC + D +L+ GS D + +DL K H+K V V F VD+ +VS S
Sbjct: 664 CCVQFPSDSGRSLAFGSADHKVYYYDLRNPKIPLCTMIGHSKTVSYVKF-VDSSTLVSSS 722
Query: 409 RDKTIKLWN 435
D T+KLW+
Sbjct: 723 TDNTLKLWD 731
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 33.9 bits (74), Expect = 0.092
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 65 TLRGHNGWVTQIA-TNPKYPDMILSSSRDKTLIVWK 169
TL GH G V ++A +PKY ++ S S D +I+WK
Sbjct: 51 TLTGHRGPVWEVAWAHPKYGSILASCSYDGQVILWK 86
Score = 27.9 bits (59), Expect = 6.0
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Frame = +1
Query: 391 QIVSGSRDKTIKLWNTL-----AECKYTIQDDGHSDWVSCVRFSPIMPTPLLYPVVGTEL 555
++ SG D T+K+W +C +Q H+DWV V ++P + P G++
Sbjct: 178 KLASGGCDNTVKVWKLANGSWKMDCFPALQK--HTDWVRDVAWAPNLGLPKSTIASGSQD 235
Query: 556 SRSGISLTGK 585
+ I GK
Sbjct: 236 GKVIIWTVGK 245
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 33.5 bits (73), Expect = 0.12
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +1
Query: 274 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 453
SGSWD ++R+WD ++ K + H+ V +A SGS + +W+ +E
Sbjct: 272 SGSWDMSVRIWDRSSMKCVKTLR-HSDWVWGLAPHETTLASTSGS---DVYIWDVSSETP 327
Query: 454 YTIQDDGH 477
I D H
Sbjct: 328 LAIIPDAH 335
Score = 33.1 bits (72), Expect = 0.16
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = +1
Query: 280 SWDKTLRLWDLAA---GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAE 447
S D L+DL KT R H + S+A +D I SGS D ++++W+ + +
Sbjct: 231 SLDGLRNLFDLTGFQKEKTEFRLWGHEGPITSLA--LDMTSIFSGSWDMSVRIWDRSSMK 288
Query: 448 CKYTIQDDGHSDWV 489
C T++ HSDWV
Sbjct: 289 CVKTLR---HSDWV 299
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 33.5 bits (73), Expect = 0.12
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 331 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFS 507
++ E H V +V+F+ + ++SGS D+ + LW+ L K + GH++ V +F
Sbjct: 53 KKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFH-SGHANNVFQAKFM 111
Query: 508 P 510
P
Sbjct: 112 P 112
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFED-HTKDVLSVAFS--VDNRQIVSGSRDKTIK 426
+G+ +SGS D+ + LWD G F H +V F D+R IV+ + D ++
Sbjct: 70 EGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKFMPFSDDRTIVTCAADGMVR 129
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 33.5 bits (73), Expect = 0.12
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +1
Query: 259 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 438
G ++G D +R++D G+ + H V V F+ SGS D TI++W T
Sbjct: 240 GEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIWQT 299
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 295 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
+RLWD+ +GK + E + V S S D R I + T+K W+
Sbjct: 170 VRLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD 214
Score = 28.3 bits (60), Expect = 4.5
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
DG + +S S D L + G FE H V S + + S S D + KLW+
Sbjct: 30 DGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWD 89
Query: 436 TL 441
L
Sbjct: 90 AL 91
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 33.5 bits (73), Expect = 0.12
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +1
Query: 259 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 438
G ++G D +R++D G+ + H V V F+ SGS D TI++W T
Sbjct: 240 GEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIWQT 299
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 295 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
+RLWD+ +GK + E + V S S D R I + T+K W+
Sbjct: 170 VRLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD 214
Score = 28.3 bits (60), Expect = 4.5
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
DG + +S S D L + G FE H V S + + S S D + KLW+
Sbjct: 30 DGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWD 89
Query: 436 TL 441
L
Sbjct: 90 AL 91
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 WD-40
repeats (PF00400) (2 weak)
Length = 1108
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
D N G D T+ ++++ + + + H K + +AFS +VS D I W+
Sbjct: 873 DNNVIAIGMEDSTIHIYNVRVDEVKSKLKGHQKRITGLAFSTALNILVSSGADAQICFWS 932
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 33.1 bits (72), Expect = 0.16
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 68 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 178
+ H G V Q+ +P + ++ SS D+ L+VW L R
Sbjct: 300 MSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNR 336
Score = 31.9 bits (69), Expect = 0.37
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Frame = +1
Query: 265 YALSGSWDKTLRLWDLAAGKTTR------RFEDHTKDVLSVAFSVDNRQIV-SGSRDKTI 423
Y LSGS D+ + LWD++A + +E H + V++ + N + S D +
Sbjct: 183 YLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSAGEDGRL 242
Query: 424 KLWNTLAECKYTIQDDGHSDWVSCVRFSP 510
+W+T + Q H V+ + F+P
Sbjct: 243 VIWDTRTN-QMQHQVKVHEREVNYLSFNP 270
>At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to retinoblastoma A associated protein; RbAp48
(GI:3309245) [Xenopus laevis]
Length = 350
Score = 33.1 bits (72), Expect = 0.16
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 68 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 166
L GH W + NP+Y ++ILS D + +W
Sbjct: 248 LPGHTHWTWAVRCNPEYEELILSVGTDSAVNLW 280
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 33.1 bits (72), Expect = 0.16
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 68 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 166
L GH W + NP+Y +ILS+ D + +W
Sbjct: 248 LPGHTHWTWAVRCNPEYDGLILSAGTDSVVNLW 280
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 32.7 bits (71), Expect = 0.21
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +1
Query: 277 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 447
G L LW + HT VL +A S + + S + D+ ++LWN E
Sbjct: 362 GFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGE 418
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 32.7 bits (71), Expect = 0.21
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +1
Query: 277 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 447
G L LW + HT VL +A S + + S + D+ ++LWN E
Sbjct: 364 GFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGE 420
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 346 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ 465
HT++V + +S + SG D + +W+ +LA K T Q
Sbjct: 251 HTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQ 291
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 32.7 bits (71), Expect = 0.21
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +1
Query: 247 AVYDG-NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 423
++Y G N SG+ D ++++W L + + +HT V+S+ ++ ++S S D T+
Sbjct: 272 SLYVGANRLYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSLI--CWDQFLLSCSLDNTV 329
Query: 424 KLW 432
K+W
Sbjct: 330 KIW 332
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +2
Query: 41 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 172
SET+ +L GH V +I T P P +++++S+D+++ +W +
Sbjct: 117 SETI--HKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNV 158
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 32.7 bits (71), Expect = 0.21
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
DG + +S S D L + G FE H V S + + + S S D T K+WN
Sbjct: 25 DGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSLDKNAIRAASASADFTAKIWN 84
Query: 436 TL 441
L
Sbjct: 85 AL 86
Score = 30.7 bits (66), Expect = 0.85
Identities = 15/58 (25%), Positives = 26/58 (44%)
Frame = +1
Query: 259 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 432
GN ++G D + +D G+ + H V V ++ SGS D T+++W
Sbjct: 235 GNTFIAGGEDMWVHRFDFQTGEEIGCNKGHHGPVHCVRYAPGGESYTSGSEDGTVRIW 292
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 32.3 bits (70), Expect = 0.28
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +2
Query: 71 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 178
R H+G+VT++ + +++SSS DKTL +W L +
Sbjct: 451 RAHDGYVTKLVAPESH--LLVSSSLDKTLRIWDLRK 484
Score = 31.9 bits (69), Expect = 0.37
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRF--EDHTKDVLSVAFSVDNRQIVSGSRD 414
+ + +S S DKTLR+WDL T + F + H V FS+ + ++S SR+
Sbjct: 464 ESHLLVSSSLDKTLRIWDLRKSWTPQPFVVKGHNDGV--SGFSIWGKDVISISRN 516
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 32.3 bits (70), Expect = 0.28
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 68 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 178
L H G V Q+ +P + ++ SS D+ L+VW + R
Sbjct: 301 LSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINR 337
Score = 31.9 bits (69), Expect = 0.37
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Frame = +1
Query: 265 YALSGSWDKTLRLWDLAAGKTTR------RFEDHTKDVLSVAFSVDNRQIV-SGSRDKTI 423
Y LSGS D+ + LWD++A T + +E H + VA+ + N I S D +
Sbjct: 184 YLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQL 243
Query: 424 KLWNTLAECKYTIQDDGHSDWVSCVRFSP 510
+W+ L + Q H ++ + F+P
Sbjct: 244 VIWD-LRTNQMQHQVKVHEREINYLSFNP 271
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 31.9 bits (69), Expect = 0.37
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +1
Query: 301 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
LW++ K R + H+ V + FS D+ ++S SRD+ +++
Sbjct: 631 LWEVGTWKAVGRLQSHSLTVTHLEFSYDDTLLLSVSRDRHFSVFS 675
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Frame = +1
Query: 253 YDGNYALSGSWDKTLRLWDL-------AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 411
YD LS S D+ ++ + + K + E H + + + +++ Q + SR
Sbjct: 657 YDDTLLLSVSRDRHFSVFSIQRTDNGEVSHKLMAKVEAHKRIIWACSWNPFGHQFATSSR 716
Query: 412 DKTIKLWN 435
DKT+K+W+
Sbjct: 717 DKTVKIWS 724
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 8/43 (18%)
Frame = +2
Query: 68 LRGHNGWVTQIA------TNPKYPD--MILSSSRDKTLIVWKL 172
L+GH W+ + T + P+ M++SSS+DK + +WKL
Sbjct: 219 LKGHTDWIRSLDFSLPLHTTEEIPNSIMLVSSSQDKVIRIWKL 261
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 53 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRD 181
KL + H + + NP + +SSRDKT+ +W + D
Sbjct: 687 KLMAKVEAHKRIIWACSWNP-FGHQFATSSRDKTVKIWSVEND 728
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 31.5 bits (68), Expect = 0.49
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 68 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 169
L GH V +A NP +I S S DKT+ +W+
Sbjct: 16 LEGHTDRVWNVAWNPAADGVIASCSADKTVRIWE 49
Score = 30.7 bits (66), Expect = 0.85
Identities = 20/82 (24%), Positives = 43/82 (52%)
Frame = +2
Query: 17 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG 196
+++ F+ SE++ + LRGH V ++ N ++ + RDK++ +W++ +E++
Sbjct: 74 VWENFATDSESVSV---LRGHESEVKSVSWNAS-GSLLATCGRDKSVWIWEIQPEEDDEF 129
Query: 197 IPQKRLYGHSHFISDVVLSMTV 262
L GHS + V+ T+
Sbjct: 130 DTIAVLTGHSEDVKMVLWHPTM 151
Score = 29.1 bits (62), Expect = 2.6
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Frame = +1
Query: 277 GSWDKTLRLWDLAA--GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 450
GS+D +W+ A ++ H +V SV+++ + + RDK++ +W E
Sbjct: 66 GSFDGNTCVWENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEE 125
Query: 451 KYTIQD----DGHSDWVSCVRFSPIM 516
GHS+ V V + P M
Sbjct: 126 DDEFDTIAVLTGHSEDVKMVLWHPTM 151
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 31.5 bits (68), Expect = 0.49
Identities = 16/80 (20%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKT--------TRRFEDHTKDVLSVAFSVDNRQIVSGSR 411
+G + + ++ +++W++ K + + H V + FS ++ QI++ S+
Sbjct: 250 NGRFLAAAAFTADVKVWEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIITASK 309
Query: 412 DKTIKLWNTLAECKYTIQDD 471
D +I++WN +Y + +D
Sbjct: 310 DGSIRVWN--INVRYHLDED 327
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 31.5 bits (68), Expect = 0.49
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 346 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
H K V V +S Q+++GS DKT+K W+
Sbjct: 97 HDKAVRCVEYSYAAGQVITGSWDKTVKCWD 126
Score = 29.5 bits (63), Expect = 2.0
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 253 YDGNYALSGSWDKTLRLWD 309
Y ++GSWDKT++ WD
Sbjct: 108 YAAGQVITGSWDKTVKCWD 126
>At5g60050.1 68418.m07530 PRLI-interacting factor-related contains
weak similarity to PRLI-interacting factor G
(GI:11139264) [Arabidopsis thaliana]
Length = 499
Score = 31.1 bits (67), Expect = 0.65
Identities = 13/43 (30%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +2
Query: 143 RDKTLIVWKLTRDENNYGIPQKRLYGHSH-FISDVVLSMTVIT 268
R+ ++++KL R+E +Y + + LYG H ++ +VL ++ +T
Sbjct: 271 REMKVLIFKLVREEADYDVSRDTLYGLCHRCLTSLVLCLSEVT 313
>At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat
family protein
Length = 334
Score = 31.1 bits (67), Expect = 0.65
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +1
Query: 346 HTKDVLSVAFSV---DNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 483
H V VAFS+ R ++SG DKT+K+W+ +C ++ +SD
Sbjct: 247 HNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCF-KCLDPNNNNNNSD 294
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 31.1 bits (67), Expect = 0.65
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +1
Query: 346 HTKDVLSVAFSV---DNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 483
H V VAFS+ R ++SG DKT+K+W+ +C ++ +SD
Sbjct: 273 HNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCF-KCLDPNNNNNNSD 320
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to
beta-transducin repeats containing protein - Homo
sapiens,PID:e1284220; 3' EST no_NP:TC8031
Length = 1446
Score = 31.1 bits (67), Expect = 0.65
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 271 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 378
+SGS D T+R+WDL +G H V + S
Sbjct: 553 ISGSMDCTIRIWDLESGNVIMIMHHHVAPVRQIILS 588
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 31.1 bits (67), Expect = 0.65
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRF--ED-HTKDVLSVAFSVDNRQIVSGSRDKTIK 426
DG ++ S DK ++D G ED H + +V++S D++++++ S DK+ K
Sbjct: 62 DGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSKRVLTVSADKSAK 121
Query: 427 LW 432
+W
Sbjct: 122 VW 123
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 337 FEDHTKDVLSVAFSVDNR-QIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 510
F+ H++ VLS AF +I + D + ++ K+ HS++V+C+R+SP
Sbjct: 4 FDGHSRRVLSCAFKPTRPFRIATCGEDFLVNFYDG-PPFKFHSSHREHSNFVNCIRYSP 61
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 31.1 bits (67), Expect = 0.65
Identities = 11/49 (22%), Positives = 29/49 (59%)
Frame = +1
Query: 289 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
KT++ + + +G+TT H + V + F+ +++++ + D+ I +W+
Sbjct: 379 KTVKAFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGSDRQILVWS 427
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 31.1 bits (67), Expect = 0.65
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 265 YALSGSWDKTLRLWDLAAG 321
Y +SGS D T+RLWD+ +G
Sbjct: 221 YLMSGSGDSTVRLWDITSG 239
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 30.7 bits (66), Expect = 0.85
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 5/104 (4%)
Frame = +2
Query: 41 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT-----RDENNYGIPQ 205
S L+L +L H V + + Y MI SSS D T+I+W L+ R N+ +P
Sbjct: 3311 SRRLRLEKSLCAHTAKVICLRVSQPYM-MIASSSDDCTVIIWDLSSLSFVRQLPNFSVPV 3369
Query: 206 KRLYGHSHFISDVVLSMTVITHFPVLGTRLCVCGISLQARLPDD 337
+Y + V + +V+ + + G L V S +LP D
Sbjct: 3370 TVVYINDLTGEIVTAAGSVLAVWSINGDCLSVVNTS---QLPTD 3410
Score = 27.5 bits (58), Expect = 7.9
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Frame = +1
Query: 241 CCAV-YDGNYALSGSWDKTLRLW----DLAAGKTTRRFED----HTKDVLSVAFSVDNRQ 393
C V +DG ++G+ D + +W D G R E HT V+ + S
Sbjct: 3279 CAGVSHDGRIVVTGAEDGLVSVWRVSKDGPRGSRRLRLEKSLCAHTAKVICLRVSQPYMM 3338
Query: 394 IVSGSRDKTIKLWN 435
I S S D T+ +W+
Sbjct: 3339 IASSSDDCTVIIWD 3352
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 30.7 bits (66), Expect = 0.85
Identities = 13/59 (22%), Positives = 26/59 (44%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 432
D N G D ++ ++++ + + + H K + +AFS +VS D + W
Sbjct: 884 DNNIIAIGMEDSSIHIYNVRVDEVKTKLKGHQKHITGLAFSTALNILVSSGADAQLFFW 942
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 274 SGSWDKTLRLWDLAAGKTTRRF-EDHTKDVLSVAFSVDNRQIVSGSRDKTIK 426
+ S+DK ++LWDL + + TK + V FS D+R +++ + D ++
Sbjct: 601 TSSFDKDVKLWDLRQEPSRPCYTASSTKGNVMVCFSPDDRYLLASAVDNEVR 652
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 319 GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 438
G ++H V +A S D+ VS S D T+K+W++
Sbjct: 1071 GVLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWDS 1110
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +2
Query: 56 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 220
LR RGH+ VT +A + ++ S S D + VWK++ E + G Q ++ G
Sbjct: 213 LRSLFRGHSQRVTDMAFFAEDVHLLASVSLDGKVFVWKIS--EGSEGDEQSQITG 265
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +1
Query: 259 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 438
G+ G D ++ + L++ K + E H + + +AFS +VS D + LW+T
Sbjct: 481 GDLLAVGLDDGSIFIHCLSSRKVKEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLWST 540
Query: 439 LAECKYT 459
+ K T
Sbjct: 541 KSWVKLT 547
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/81 (25%), Positives = 34/81 (41%)
Frame = +2
Query: 17 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG 196
L+ P S S + L H G V + N K P+ + S + D T+ +W L N
Sbjct: 94 LWNPISSESGEIAHVRDLSKHKGPVRGLEFNVKSPNQLASGADDGTVCIWDLA----NPS 149
Query: 197 IPQKRLYGHSHFISDVVLSMT 259
P L G ++ + S++
Sbjct: 150 KPSHYLKGTGSYMQSEISSLS 170
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = +1
Query: 262 NYALSGSWDKTLRLWDLAAGKTTRR-FED---HTKDVLSVAFSV-DNRQIVSGSRDKTIK 426
N +GS D WD+ R F++ HT V ++ + D I +GS D+T++
Sbjct: 177 NLVYTGSDDCKFSCWDIRDSPADNRVFQNSKVHTMGVCCISSNPSDPYSIFTGSYDETLR 236
Query: 427 LWNT 438
+W+T
Sbjct: 237 VWDT 240
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +1
Query: 274 SGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 450
+G+ DKT R+WD ++ + + V S+ F+ D R + + +++T +
Sbjct: 336 TGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSGY 395
Query: 451 KYTIQDDGHSDWVSCVRFSP 510
K + D + +S + FSP
Sbjct: 396 KKEQEIDFFGE-ISGISFSP 414
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +1
Query: 301 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS 480
L D + G+T + H + A+ + +G++DKT ++W+T + G+
Sbjct: 303 LVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNL 362
Query: 481 DWVSCVRFS 507
V +RF+
Sbjct: 363 GAVRSIRFT 371
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +1
Query: 274 SGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 450
+G+ DKT R+WD ++ + + V S+ F+ D R + + +++T +
Sbjct: 330 TGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSGY 389
Query: 451 KYTIQDDGHSDWVSCVRFSP 510
K + D + +S + FSP
Sbjct: 390 KKEQEIDFFGE-ISGISFSP 408
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +1
Query: 301 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS 480
L D + G+T + H + A+ + +G++DKT ++W+T + G+
Sbjct: 297 LVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNL 356
Query: 481 DWVSCVRFS 507
V +RF+
Sbjct: 357 GAVRSIRFT 365
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 381
DG ++ D L+LW + G+ R +E H + V SV
Sbjct: 123 DGGTVVTAGTDGCLKLWSVEDGRVIRTYEGHVNNRNFVGLSV 164
>At5g04560.1 68418.m00456 DEMETER protein (DME) identical to DEMETER
protein [Arabidopsis thaliana] GI:21743571; contains
Pfam profile PF00730: HhH-GPD superfamily base excision
DNA repair protein
Length = 1729
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 286 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 423
D+T R+W+L GK + D KD + + R++ G D I
Sbjct: 702 DETTRIWNLLMGKGDEKEGDEEKDKKKEKWWEEERRVFRGRADSFI 747
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/49 (22%), Positives = 29/49 (59%)
Frame = +1
Query: 289 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
KT++ + + +G+TT H + V + F+ +++++ + D+ I +W+
Sbjct: 379 KTVKGFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGADRQIIVWS 427
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 29.1 bits (62), Expect = 2.6
Identities = 20/75 (26%), Positives = 30/75 (40%), Gaps = 15/75 (20%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTR---------------RFEDHTKDVLSVAFSVDNR 390
DG Y +G D + LWD+ + + F H V S+ F
Sbjct: 217 DGRYLATGGVDCHVHLWDIRTREHVQVNKLKNNQVKDSVHCAFTGHCGIVSSLCFREGTA 276
Query: 391 QIVSGSRDKTIKLWN 435
++ SGS D T+ +WN
Sbjct: 277 ELFSGSYDGTLSIWN 291
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +1
Query: 295 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
LR+ DL + R H V VA S D+ + S S+D TI W+
Sbjct: 127 LRVQDLQSSDKFRVIVKHQHSVTGVALSDDDSRGFSVSKDGTILHWD 173
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 29.1 bits (62), Expect = 2.6
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Frame = +1
Query: 199 TSKAFIRSFALHF*CCAVY---DGNY-ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 366
T+ A + FA H+ + DG A+ G + L L D +GK E H S
Sbjct: 266 TNFALLNRFAFHWSVNNISTSPDGKLVAVLGDSPECL-LADTGSGKVIHGLEGHLDYSFS 324
Query: 367 VAFSVDNRQIVSGSRDKTIKLWN 435
A+ + + + +G++D T +LW+
Sbjct: 325 SAWHPNGQILATGNQDTTCRLWD 347
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/48 (22%), Positives = 23/48 (47%)
Frame = +1
Query: 265 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 408
Y SG + +++WDL ++ + HT + V ++ + + S S
Sbjct: 107 YICSGGTGQIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVS 154
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 349 TKDVLSVAFSVDNRQIVSGSRDKTIKLWN 435
T LSV +S D ++I SGS D I+ W+
Sbjct: 198 TGRALSVTWSADAQRIFSGSSDGLIRCWD 226
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 27.9 bits (59), Expect = 6.0
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +1
Query: 334 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 432
R H + + +S+D +IVS S D++ ++W
Sbjct: 230 RLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIW 262
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 27.9 bits (59), Expect = 6.0
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +1
Query: 334 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 432
R H + + +S+D +IVS S D++ ++W
Sbjct: 230 RLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIW 262
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +2
Query: 17 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 184
L KP S+ S L+G+ G ++ I+ N K ++ S+S + T ++W L + +
Sbjct: 152 LLKP-SEPSHFPLLKGSGSATQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQK 206
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +2
Query: 17 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 184
L KP S+ S L+G+ G ++ I+ N K ++ S+S + T ++W L + +
Sbjct: 152 LLKP-SEPSHFPLLKGSGSATQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQK 206
>At2g35510.1 68415.m04349 WWE domain-containing protein contains
Pfam domain, PF02825: WWE domain
Length = 568
Score = 27.9 bits (59), Expect = 6.0
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 505 SPIMPTPLLYPVVGTELSRSGISL 576
SPIMP PLL+ + ++++R + L
Sbjct: 501 SPIMPFPLLFKAISSKIARKDMDL 524
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +2
Query: 41 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 166
S T+ RG GH V +A +P S D LI+W
Sbjct: 279 SPTVGPRGVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILW 320
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 27.9 bits (59), Expect = 6.0
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Frame = +1
Query: 241 CCAV-YDGNYALSGSWDKTLRLW----DLAAGKTTRRFED----HTKDVLSVAFSVDNRQ 393
C V +DG ++G+ D + +W D G R E HT V + S
Sbjct: 3335 CAGVSHDGRIVVTGAEDGLVCVWRVSKDGPRGSRRLRLEKALCAHTAKVTCLRVSQPYMM 3394
Query: 394 IVSGSRDKTIKLWN 435
I SGS D T+ +W+
Sbjct: 3395 IASGSDDCTVIIWD 3408
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 361 LSVAFSVDNRQIVSGSRDKTIKLWN 435
LSV +S D ++I SGS D I+ W+
Sbjct: 202 LSVTWSPDAKRIFSGSSDGLIRCWD 226
>At4g03970.1 68417.m00561 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At5g28170, At1g35110,
At1g44880, At3g42530, At4g19320, At5g36020, At3g43010,
At2g10350
Length = 1043
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 110 PKYPDMILSSSRDKTLIVWK-LTRDENNYGIPQ 205
P D++L S KT+++WK LT + +PQ
Sbjct: 220 PGLLDLVLDDSTSKTILLWKRLTHPKQVISLPQ 252
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 256 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 378
DG Y +G L ++DL + T + H ++ S++FS
Sbjct: 396 DGKYLAAGDCGGNLHIYDLQESEYTCFMDAHEAEIQSLSFS 436
>At2g28940.1 68415.m03517 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 343
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +1
Query: 427 LWNTLAECKYTIQDDGHSDWVSCVRFSPIMPTPLLYPVVG 546
L N+L Y++Q GH +W++ V F ++ P L +VG
Sbjct: 15 LLNSLIVKVYSVQ--GHKEWINEVNFLGVVNHPNLVKLVG 52
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,208,278
Number of Sequences: 28952
Number of extensions: 331255
Number of successful extensions: 2060
Number of sequences better than 10.0: 213
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1928
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1314848736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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