Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40169
         (689 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    27   0.11 
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    22   4.1  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   5.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.5  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 26/123 (21%), Positives = 52/123 (42%), Gaps = 3/123 (2%)
 Frame = +2

Query: 287 DIWSIFLESQRLFSPTAVFQLGSQMLDILEYIHNRGYVHADIKGANILMGLKKGKEHQAY 466
           D  ++  E+  +  P  +  +  Q+   +E++     VH D+   N+L+     + H   
Sbjct: 577 DFHNMSFENDFIIQPKHLLSIARQVALGMEHLAKTRVVHRDLAARNVLV----CENHTVK 632

Query: 467 LVDFGLASRVNDKESNQILNLPIMELLSTQVVMHT*VYRRCVVI*RFWGYNMLQW--IT- 637
           + DFGL+  V   + N        +L    + + +  ++R       W + +L W  +T 
Sbjct: 633 VSDFGLSRDV--YQDNVYCKNGGGKLPVRWMALESLTHQRYTTYSDVWSFGVLLWEIVTL 690

Query: 638 GGT 646
           GGT
Sbjct: 691 GGT 693


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +1

Query: 58  PGRMRITRMLSKSNLMRMDPCLLRNTFTLEMP 153
           PG +   R L +  +   + CL+ N +T  +P
Sbjct: 34  PGNVCYQRDLFRQKITGSENCLVLNVYTRNIP 65


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 446 GKEHQAYLVDFGLASRVNDKESNQI 520
           GK++   +V+   ASRVN +   Q+
Sbjct: 476 GKDYSLPMVNHAAASRVNIQRMKQV 500


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -3

Query: 75  NSHSSWESH 49
           N HS+W+SH
Sbjct: 357 NRHSAWQSH 365


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +1

Query: 520 PKSAHNGTIEYTSRDAHLGVPTMRGDLEILG 612
           P   HNG        AH+G+P  + D +  G
Sbjct: 125 PFFCHNGDPLSQPPPAHMGIPPYQLDSKTAG 155


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +1

Query: 520 PKSAHNGTIEYTSRDAHLGVPTMRGDLEILG 612
           P   HNG        AH+G+P  + D +  G
Sbjct: 17  PFFCHNGDPLSQPPPAHMGIPPYQLDSKTAG 47


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,642
Number of Sequences: 336
Number of extensions: 4036
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)