Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40168
         (617 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y08614-1|CAA69905.2| 1071|Homo sapiens CRM1 protein.                  172   7e-43
D89729-1|BAA23415.1| 1071|Homo sapiens CRM1 protein protein.          172   7e-43
BC032847-1|AAH32847.1| 1071|Homo sapiens XPO1 protein protein.        172   7e-43
AC016727-1|AAY14949.1| 1071|Homo sapiens unknown protein.             172   7e-43

>Y08614-1|CAA69905.2| 1071|Homo sapiens CRM1 protein.
          Length = 1071

 Score =  172 bits (419), Expect = 7e-43
 Identities = 78/91 (85%), Positives = 83/91 (91%)
 Frame = +1

Query: 241 KEIFGIVIKELLGLCEQKKGKDNKAIIASNIMHVVGQYPRFLRAHWKFLKTVVNKLFEFM 420
           K     VIK+LLGLCEQK+GKDNKAIIASNIM++VGQYPRFLRAHWKFLKTVVNKLFEFM
Sbjct: 514 KRFLVTVIKDLLGLCEQKRGKDNKAIIASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFM 573

Query: 421 HETHDGVQDMACDTFIKIAIKCRRHFVTTQL 513
           HETHDGVQDMACDTFIKIA KCRRHFV  Q+
Sbjct: 574 HETHDGVQDMACDTFIKIAQKCRRHFVQVQV 604



 Score =  169 bits (411), Expect = 7e-42
 Identities = 79/104 (75%), Positives = 84/104 (80%)
 Frame = +2

Query: 2   ENENGEVVREFMKDTDSINLYKNMRETLVYLTHLDYLDTERIMTEKLQNQVNGTEWSWKN 181
           EN+ GEVVREFMKDTDSINLYKNMRETLVYLTHLDY+DTERIMTEKL NQVNGTEWSWKN
Sbjct: 434 ENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYVDTERIMTEKLHNQVNGTEWSWKN 493

Query: 182 LNTLCWAIGSISGALSEDDEKRXXXXXXXXXXXXXNRKREKITK 313
           LNTLCWAIGSISGA+ E+DEKR              +KR K  K
Sbjct: 494 LNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNK 537



 Score = 60.1 bits (139), Expect = 6e-09
 Identities = 27/41 (65%), Positives = 30/41 (73%)
 Frame = +3

Query: 495 FCHYSVGEACPFIEEILGTISTIICDLPTLQVHTFYEAVGH 617
           F    VGE  PFI+EIL  I+TIICDL   QVHTFYEAVG+
Sbjct: 599 FVQVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGY 639


>D89729-1|BAA23415.1| 1071|Homo sapiens CRM1 protein protein.
          Length = 1071

 Score =  172 bits (419), Expect = 7e-43
 Identities = 78/91 (85%), Positives = 83/91 (91%)
 Frame = +1

Query: 241 KEIFGIVIKELLGLCEQKKGKDNKAIIASNIMHVVGQYPRFLRAHWKFLKTVVNKLFEFM 420
           K     VIK+LLGLCEQK+GKDNKAIIASNIM++VGQYPRFLRAHWKFLKTVVNKLFEFM
Sbjct: 514 KRFLVTVIKDLLGLCEQKRGKDNKAIIASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFM 573

Query: 421 HETHDGVQDMACDTFIKIAIKCRRHFVTTQL 513
           HETHDGVQDMACDTFIKIA KCRRHFV  Q+
Sbjct: 574 HETHDGVQDMACDTFIKIAQKCRRHFVQVQV 604



 Score =  169 bits (411), Expect = 7e-42
 Identities = 79/104 (75%), Positives = 84/104 (80%)
 Frame = +2

Query: 2   ENENGEVVREFMKDTDSINLYKNMRETLVYLTHLDYLDTERIMTEKLQNQVNGTEWSWKN 181
           EN+ GEVVREFMKDTDSINLYKNMRETLVYLTHLDY+DTERIMTEKL NQVNGTEWSWKN
Sbjct: 434 ENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYVDTERIMTEKLHNQVNGTEWSWKN 493

Query: 182 LNTLCWAIGSISGALSEDDEKRXXXXXXXXXXXXXNRKREKITK 313
           LNTLCWAIGSISGA+ E+DEKR              +KR K  K
Sbjct: 494 LNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNK 537



 Score = 60.1 bits (139), Expect = 6e-09
 Identities = 27/41 (65%), Positives = 30/41 (73%)
 Frame = +3

Query: 495 FCHYSVGEACPFIEEILGTISTIICDLPTLQVHTFYEAVGH 617
           F    VGE  PFI+EIL  I+TIICDL   QVHTFYEAVG+
Sbjct: 599 FVQVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGY 639


>BC032847-1|AAH32847.1| 1071|Homo sapiens XPO1 protein protein.
          Length = 1071

 Score =  172 bits (419), Expect = 7e-43
 Identities = 78/91 (85%), Positives = 83/91 (91%)
 Frame = +1

Query: 241 KEIFGIVIKELLGLCEQKKGKDNKAIIASNIMHVVGQYPRFLRAHWKFLKTVVNKLFEFM 420
           K     VIK+LLGLCEQK+GKDNKAIIASNIM++VGQYPRFLRAHWKFLKTVVNKLFEFM
Sbjct: 514 KRFLVTVIKDLLGLCEQKRGKDNKAIIASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFM 573

Query: 421 HETHDGVQDMACDTFIKIAIKCRRHFVTTQL 513
           HETHDGVQDMACDTFIKIA KCRRHFV  Q+
Sbjct: 574 HETHDGVQDMACDTFIKIAQKCRRHFVQVQV 604



 Score =  169 bits (411), Expect = 7e-42
 Identities = 79/104 (75%), Positives = 84/104 (80%)
 Frame = +2

Query: 2   ENENGEVVREFMKDTDSINLYKNMRETLVYLTHLDYLDTERIMTEKLQNQVNGTEWSWKN 181
           EN+ GEVVREFMKDTDSINLYKNMRETLVYLTHLDY+DTERIMTEKL NQVNGTEWSWKN
Sbjct: 434 ENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYVDTERIMTEKLHNQVNGTEWSWKN 493

Query: 182 LNTLCWAIGSISGALSEDDEKRXXXXXXXXXXXXXNRKREKITK 313
           LNTLCWAIGSISGA+ E+DEKR              +KR K  K
Sbjct: 494 LNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNK 537



 Score = 60.1 bits (139), Expect = 6e-09
 Identities = 27/41 (65%), Positives = 30/41 (73%)
 Frame = +3

Query: 495 FCHYSVGEACPFIEEILGTISTIICDLPTLQVHTFYEAVGH 617
           F    VGE  PFI+EIL  I+TIICDL   QVHTFYEAVG+
Sbjct: 599 FVQVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGY 639


>AC016727-1|AAY14949.1| 1071|Homo sapiens unknown protein.
          Length = 1071

 Score =  172 bits (419), Expect = 7e-43
 Identities = 78/91 (85%), Positives = 83/91 (91%)
 Frame = +1

Query: 241 KEIFGIVIKELLGLCEQKKGKDNKAIIASNIMHVVGQYPRFLRAHWKFLKTVVNKLFEFM 420
           K     VIK+LLGLCEQK+GKDNKAIIASNIM++VGQYPRFLRAHWKFLKTVVNKLFEFM
Sbjct: 514 KRFLVTVIKDLLGLCEQKRGKDNKAIIASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFM 573

Query: 421 HETHDGVQDMACDTFIKIAIKCRRHFVTTQL 513
           HETHDGVQDMACDTFIKIA KCRRHFV  Q+
Sbjct: 574 HETHDGVQDMACDTFIKIAQKCRRHFVQVQV 604



 Score =  169 bits (411), Expect = 7e-42
 Identities = 79/104 (75%), Positives = 84/104 (80%)
 Frame = +2

Query: 2   ENENGEVVREFMKDTDSINLYKNMRETLVYLTHLDYLDTERIMTEKLQNQVNGTEWSWKN 181
           EN+ GEVVREFMKDTDSINLYKNMRETLVYLTHLDY+DTERIMTEKL NQVNGTEWSWKN
Sbjct: 434 ENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYVDTERIMTEKLHNQVNGTEWSWKN 493

Query: 182 LNTLCWAIGSISGALSEDDEKRXXXXXXXXXXXXXNRKREKITK 313
           LNTLCWAIGSISGA+ E+DEKR              +KR K  K
Sbjct: 494 LNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNK 537



 Score = 60.1 bits (139), Expect = 6e-09
 Identities = 27/41 (65%), Positives = 30/41 (73%)
 Frame = +3

Query: 495 FCHYSVGEACPFIEEILGTISTIICDLPTLQVHTFYEAVGH 617
           F    VGE  PFI+EIL  I+TIICDL   QVHTFYEAVG+
Sbjct: 599 FVQVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGY 639


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,870,287
Number of Sequences: 237096
Number of extensions: 1756774
Number of successful extensions: 3473
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3473
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)