Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40167
         (605 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   2.0  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   3.5  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   4.6  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   4.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.1  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.1  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 527 WPLLPRSFRYVGCADGGEALPATER 601
           +P    +++Y GC+D    LP   R
Sbjct: 17  YPFQGTTYKYTGCSDNDGFLPGQGR 41


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/46 (19%), Positives = 24/46 (52%)
 Frame = +1

Query: 310 EKVETKVTMNDEALALCKVLQGQIYIEQLNDYDAAEKIIEHLDSTL 447
           +K+     +    L  C ++  +IY +++  ++ + +I+  LDS +
Sbjct: 42  DKISAICFLLSTILGTCWIIYVRIYCKEIRFFEISFEILGSLDSLI 87


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 1/84 (1%)
 Frame = +2

Query: 104 YNKKLWHQLTLKLQEFVKNPALQRGDNLIQ-LYNNFLTTFESKINPLSLVETLLISWNSM 280
           +N K W    ++      +P  ++  + I+ LY + L  F+  +  +   E  L  WNS 
Sbjct: 316 FNAKPWSNYCVEPPCGQLDPTKEKLYDAIEALYGDMLKQFKPPLFHMGGDEVHLGCWNST 375

Query: 281 STREMLSHSLRRWKRKLQ*MMKHW 352
            +        + W R     +K W
Sbjct: 376 PSIVQWMQDQKGWGRSEGDFIKLW 399


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/47 (19%), Positives = 22/47 (46%)
 Frame = -2

Query: 517 RTLNIPRLTYKIVRELESHHQHLRVYCLNVQLFSRLHHNHSAVQCIF 377
           +  N+ ++  K+VRE+        + C ++     +   H+++  IF
Sbjct: 135 KLFNLHKILVKVVREINGIFAFQVLMCTSMNFVLLIGDLHTSIYIIF 181


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = -3

Query: 345 FIIHCNFRFHLL 310
           ++ HC+F FH++
Sbjct: 667 WLFHCHFLFHIV 678


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = -3

Query: 345 FIIHCNFRFHLL 310
           ++ HC+F FH++
Sbjct: 667 WLFHCHFLFHIV 678


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,120
Number of Sequences: 336
Number of extensions: 3021
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)