Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40167
(605 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007307-1|AAP35971.1| 376|Homo sapiens proteasome (prosome, ma... 101 3e-21
BC001747-1|AAH01747.1| 376|Homo sapiens proteasome (prosome, ma... 101 3e-21
BC001100-1|AAH01100.1| 376|Homo sapiens proteasome (prosome, ma... 101 3e-21
AF107837-1|AAD43442.1| 376|Homo sapiens 26S proteasome subunit ... 101 3e-21
AF086708-1|AAC64104.1| 376|Homo sapiens 26S proteasome subunit ... 101 3e-21
AK222895-1|BAD96615.1| 376|Homo sapiens proteasome 26S non-ATPa... 99 6e-21
AB009398-1|BAA33214.1| 376|Homo sapiens 26S proteasome subunit ... 99 6e-21
>BT007307-1|AAP35971.1| 376|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 13 protein.
Length = 376
Score = 101 bits (241), Expect = 3e-21
Identities = 47/103 (45%), Positives = 68/103 (66%)
Frame = +2
Query: 26 DVSDFLTKKQASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYNN 205
DV FL + Q+S P A W +LEELY KKLWHQLTL++ +FV++P +GD LI+LY N
Sbjct: 3 DVPGFLQQSQSSGPGQPAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYEN 62
Query: 206 FLTTFESKINPLSLVETLLISWNSMSTREMLSHSLRRWKRKLQ 334
F++ FE ++NPLSLVE +L M+ + L + + K++
Sbjct: 63 FISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVK 105
Score = 70.9 bits (166), Expect = 3e-12
Identities = 34/88 (38%), Positives = 52/88 (59%)
Frame = +1
Query: 256 IAHIVEQYVNKRDAVTFLEKVETKVTMNDEALALCKVLQGQIYIEQLNDYDAAEKIIEHL 435
I H+V Q + A+TFLEK KV +DEA+ LCK G + + + D ++ IE +
Sbjct: 80 ILHVVRQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGALKL-NIGDLQVTKETIEDV 138
Query: 436 DSTLEDADGVTPVHGRFYKLASEYSESV 519
+ L + GVT VH RFY L+S+Y +++
Sbjct: 139 EEMLNNLPGVTSVHSRFYDLSSKYYQTI 166
>BC001747-1|AAH01747.1| 376|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 13 protein.
Length = 376
Score = 101 bits (241), Expect = 3e-21
Identities = 47/103 (45%), Positives = 68/103 (66%)
Frame = +2
Query: 26 DVSDFLTKKQASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYNN 205
DV FL + Q+S P A W +LEELY KKLWHQLTL++ +FV++P +GD LI+LY N
Sbjct: 3 DVPGFLQQSQSSGPGQPAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYEN 62
Query: 206 FLTTFESKINPLSLVETLLISWNSMSTREMLSHSLRRWKRKLQ 334
F++ FE ++NPLSLVE +L M+ + L + + K++
Sbjct: 63 FISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVK 105
Score = 70.9 bits (166), Expect = 3e-12
Identities = 34/88 (38%), Positives = 52/88 (59%)
Frame = +1
Query: 256 IAHIVEQYVNKRDAVTFLEKVETKVTMNDEALALCKVLQGQIYIEQLNDYDAAEKIIEHL 435
I H+V Q + A+TFLEK KV +DEA+ LCK G + + + D ++ IE +
Sbjct: 80 ILHVVRQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGALKL-NIGDLQVTKETIEDV 138
Query: 436 DSTLEDADGVTPVHGRFYKLASEYSESV 519
+ L + GVT VH RFY L+S+Y +++
Sbjct: 139 EEMLNNLPGVTSVHSRFYDLSSKYYQTI 166
>BC001100-1|AAH01100.1| 376|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 13 protein.
Length = 376
Score = 101 bits (241), Expect = 3e-21
Identities = 47/103 (45%), Positives = 68/103 (66%)
Frame = +2
Query: 26 DVSDFLTKKQASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYNN 205
DV FL + Q+S P A W +LEELY KKLWHQLTL++ +FV++P +GD LI+LY N
Sbjct: 3 DVPGFLQQSQSSGPGQPAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYEN 62
Query: 206 FLTTFESKINPLSLVETLLISWNSMSTREMLSHSLRRWKRKLQ 334
F++ FE ++NPLSLVE +L M+ + L + + K++
Sbjct: 63 FISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVK 105
Score = 70.9 bits (166), Expect = 3e-12
Identities = 34/88 (38%), Positives = 52/88 (59%)
Frame = +1
Query: 256 IAHIVEQYVNKRDAVTFLEKVETKVTMNDEALALCKVLQGQIYIEQLNDYDAAEKIIEHL 435
I H+V Q + A+TFLEK KV +DEA+ LCK G + + + D ++ IE +
Sbjct: 80 ILHVVRQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGALKL-NIGDLQVTKETIEDV 138
Query: 436 DSTLEDADGVTPVHGRFYKLASEYSESV 519
+ L + GVT VH RFY L+S+Y +++
Sbjct: 139 EEMLNNLPGVTSVHSRFYDLSSKYYQTI 166
>AF107837-1|AAD43442.1| 376|Homo sapiens 26S proteasome subunit
p40.5 protein.
Length = 376
Score = 101 bits (241), Expect = 3e-21
Identities = 47/103 (45%), Positives = 68/103 (66%)
Frame = +2
Query: 26 DVSDFLTKKQASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYNN 205
DV FL + Q+S P A W +LEELY KKLWHQLTL++ +FV++P +GD LI+LY N
Sbjct: 3 DVPGFLQQSQSSGPGQPAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYEN 62
Query: 206 FLTTFESKINPLSLVETLLISWNSMSTREMLSHSLRRWKRKLQ 334
F++ FE ++NPLSLVE +L M+ + L + + K++
Sbjct: 63 FISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVK 105
Score = 70.9 bits (166), Expect = 3e-12
Identities = 34/88 (38%), Positives = 52/88 (59%)
Frame = +1
Query: 256 IAHIVEQYVNKRDAVTFLEKVETKVTMNDEALALCKVLQGQIYIEQLNDYDAAEKIIEHL 435
I H+V Q + A+TFLEK KV +DEA+ LCK G + + + D ++ IE +
Sbjct: 80 ILHVVRQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGALKL-NIGDLQVTKETIEDV 138
Query: 436 DSTLEDADGVTPVHGRFYKLASEYSESV 519
+ L + GVT VH RFY L+S+Y +++
Sbjct: 139 EEMLNNLPGVTSVHSRFYDLSSKYYQTI 166
>AF086708-1|AAC64104.1| 376|Homo sapiens 26S proteasome subunit 11
protein.
Length = 376
Score = 101 bits (241), Expect = 3e-21
Identities = 47/103 (45%), Positives = 68/103 (66%)
Frame = +2
Query: 26 DVSDFLTKKQASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYNN 205
DV FL + Q+S P A W +LEELY KKLWHQLTL++ +FV++P +GD LI+LY N
Sbjct: 3 DVPGFLQQSQSSGPGQPAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYEN 62
Query: 206 FLTTFESKINPLSLVETLLISWNSMSTREMLSHSLRRWKRKLQ 334
F++ FE ++NPLSLVE +L M+ + L + + K++
Sbjct: 63 FISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVK 105
Score = 70.9 bits (166), Expect = 3e-12
Identities = 34/88 (38%), Positives = 52/88 (59%)
Frame = +1
Query: 256 IAHIVEQYVNKRDAVTFLEKVETKVTMNDEALALCKVLQGQIYIEQLNDYDAAEKIIEHL 435
I H+V Q + A+TFLEK KV +DEA+ LCK G + + + D ++ IE +
Sbjct: 80 ILHVVRQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGALKL-NIGDLQVTKETIEDV 138
Query: 436 DSTLEDADGVTPVHGRFYKLASEYSESV 519
+ L + GVT VH RFY L+S+Y +++
Sbjct: 139 EEMLNNLPGVTSVHSRFYDLSSKYYQTI 166
>AK222895-1|BAD96615.1| 376|Homo sapiens proteasome 26S non-ATPase
subunit 13 isoform 1 variant protein.
Length = 376
Score = 99 bits (238), Expect = 6e-21
Identities = 47/103 (45%), Positives = 67/103 (65%)
Frame = +2
Query: 26 DVSDFLTKKQASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYNN 205
DV FL + Q S P A W +LEELY KKLWHQLTL++ +FV++P +GD LI+LY N
Sbjct: 3 DVPGFLQQSQNSGPGQPAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYEN 62
Query: 206 FLTTFESKINPLSLVETLLISWNSMSTREMLSHSLRRWKRKLQ 334
F++ FE ++NPLSLVE +L M+ + L + + K++
Sbjct: 63 FISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVK 105
Score = 70.9 bits (166), Expect = 3e-12
Identities = 34/88 (38%), Positives = 52/88 (59%)
Frame = +1
Query: 256 IAHIVEQYVNKRDAVTFLEKVETKVTMNDEALALCKVLQGQIYIEQLNDYDAAEKIIEHL 435
I H+V Q + A+TFLEK KV +DEA+ LCK G + + + D ++ IE +
Sbjct: 80 ILHVVRQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGALKL-NIGDLQVTKETIEDV 138
Query: 436 DSTLEDADGVTPVHGRFYKLASEYSESV 519
+ L + GVT VH RFY L+S+Y +++
Sbjct: 139 EEMLNNLPGVTSVHSRFYDLSSKYYQTI 166
>AB009398-1|BAA33214.1| 376|Homo sapiens 26S proteasome subunit
p40.5 protein.
Length = 376
Score = 99 bits (238), Expect = 6e-21
Identities = 47/103 (45%), Positives = 67/103 (65%)
Frame = +2
Query: 26 DVSDFLTKKQASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYNN 205
DV FL + Q S P A W +LEELY KKLWHQLTL++ +FV++P +GD LI+LY N
Sbjct: 3 DVPGFLQQSQNSGPGQPAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYEN 62
Query: 206 FLTTFESKINPLSLVETLLISWNSMSTREMLSHSLRRWKRKLQ 334
F++ FE ++NPLSLVE +L M+ + L + + K++
Sbjct: 63 FISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVK 105
Score = 70.9 bits (166), Expect = 3e-12
Identities = 34/88 (38%), Positives = 52/88 (59%)
Frame = +1
Query: 256 IAHIVEQYVNKRDAVTFLEKVETKVTMNDEALALCKVLQGQIYIEQLNDYDAAEKIIEHL 435
I H+V Q + A+TFLEK KV +DEA+ LCK G + + + D ++ IE +
Sbjct: 80 ILHVVRQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGALKL-NIGDLQVTKETIEDV 138
Query: 436 DSTLEDADGVTPVHGRFYKLASEYSESV 519
+ L + GVT VH RFY L+S+Y +++
Sbjct: 139 EEMLNNLPGVTSVHSRFYDLSSKYYQTI 166
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,196,199
Number of Sequences: 237096
Number of extensions: 2005413
Number of successful extensions: 4030
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4023
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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