Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40167
         (605 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49130-6|CAA88971.1|  387|Caenorhabditis elegans Hypothetical pr...    67   8e-12
Z47812-10|CAH04720.1|  979|Caenorhabditis elegans Hypothetical p...    31   0.84 
AC024882-9|AAF60930.2|  341|Caenorhabditis elegans Hypothetical ...    31   0.84 
Z81098-3|CAB03179.1|  131|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z47812-6|CAC70105.1|  984|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z47812-5|CAA87792.1|  980|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AC024791-24|AAF60656.1|  627|Caenorhabditis elegans Hypothetical...    28   5.9  
U64842-10|AAB37080.1|  402|Caenorhabditis elegans Hypothetical p...    27   7.9  
AC024882-8|AAF60931.2|  340|Caenorhabditis elegans Seven tm rece...    27   7.9  

>Z49130-6|CAA88971.1|  387|Caenorhabditis elegans Hypothetical
           protein T06D8.8 protein.
          Length = 387

 Score = 67.3 bits (157), Expect = 8e-12
 Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
 Frame = +2

Query: 35  DFLTKK-QASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYNNFL 211
           D+L  K  A+   LA DW  L+EL+ KKLWHQLT+  +  VK P      ++ + Y  F+
Sbjct: 5   DYLNGKLAAANGPLADDWKNLKELWEKKLWHQLTVLTRSLVKKPQFVASTDMHEFYRLFV 64

Query: 212 TTFESKINPLSLVETLLISWNSMSTRE 292
             +E ++NPL LVE  +    +++T++
Sbjct: 65  AEWELRVNPLQLVEICISIAQNIATKD 91



 Score = 34.3 bits (75), Expect = 0.069
 Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
 Frame = +1

Query: 283 NKRDAVTFLEKVETKVTMNDEALALCKVLQGQIYIEQLNDYDAAEKIIE------HLDST 444
           +K+ ++ FL K+   +  N + +A+ ++  G+I   +L + D   +II+       +DST
Sbjct: 91  DKQKSMEFLSKIGNVI--NKDKIAVARLHTGEIEA-RLENKDKNGQIIDLKSIRTQIDST 147

Query: 445 LEDAD---GVTPVHGRFYKLASEYSESV 519
             + D   GVT VH  FY+++S Y   V
Sbjct: 148 QHEVDSLVGVTEVHAPFYRVSSLYLREV 175


>Z47812-10|CAH04720.1|  979|Caenorhabditis elegans Hypothetical
           protein T05H10.5c protein.
          Length = 979

 Score = 30.7 bits (66), Expect = 0.84
 Identities = 25/108 (23%), Positives = 44/108 (40%)
 Frame = +2

Query: 41  LTKKQASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYNNFLTTF 220
           L   ++   A A+ + + +E +   +   LT+  Q  V  P +    N I  Y+  L   
Sbjct: 417 LKMDESGAVAFASQFDRPDEYHFSTVCFFLTIAAQRLVIPPLM----NQISEYSRHLKEL 472

Query: 221 ESKINPLSLVETLLISWNSMSTREMLSHSLRRWKRKLQ*MMKHWLCVR 364
           + KIN L      +  +      + L++    WK     M +H LCV+
Sbjct: 473 KHKINALKEKLNTVSGFERAEVEKKLNYETEHWKL----MSRHLLCVK 516


>AC024882-9|AAF60930.2|  341|Caenorhabditis elegans Hypothetical
           protein Y9C9A.5 protein.
          Length = 341

 Score = 30.7 bits (66), Expect = 0.84
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = -2

Query: 493 TYKIVRELESHHQHLRVYCLNVQLFSRL-HHNHSAVQCIFVLVA-PYTEPVLHHSL 332
           TYK+VREL  H +    Y L  QLF  L       +  +F+ +   +T P+LH  +
Sbjct: 225 TYKLVRELSKHGESEYTYKLQSQLFRALVAQAFIPITFLFLPIGILFTAPLLHFDI 280


>Z81098-3|CAB03179.1|  131|Caenorhabditis elegans Hypothetical
           protein K07A12.3 protein.
          Length = 131

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 50  KQASEPALAADWAKLEELYNKKLWHQLTLK 139
           + A  PA+ ADWAKL++    K +  L++K
Sbjct: 46  RSADIPAIKADWAKLQKFIETKQYVNLSIK 75


>Z47812-6|CAC70105.1|  984|Caenorhabditis elegans Hypothetical
           protein T05H10.5b protein.
          Length = 984

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 1/109 (0%)
 Frame = +2

Query: 41  LTKKQASEPALAADWA-KLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYNNFLTT 217
           L   ++   A A+ +A + +E +   +   LT+  Q  V  P +    N I  Y+  L  
Sbjct: 421 LKMDESGAVAFASQFADRPDEYHFSTVCFFLTIAAQRLVIPPLM----NQISEYSRHLKE 476

Query: 218 FESKINPLSLVETLLISWNSMSTREMLSHSLRRWKRKLQ*MMKHWLCVR 364
            + KIN L      +  +      + L++    WK     M +H LCV+
Sbjct: 477 LKHKINALKEKLNTVSGFERAEVEKKLNYETEHWKL----MSRHLLCVK 521


>Z47812-5|CAA87792.1|  980|Caenorhabditis elegans Hypothetical
           protein T05H10.5a protein.
          Length = 980

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 1/109 (0%)
 Frame = +2

Query: 41  LTKKQASEPALAADWA-KLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYNNFLTT 217
           L   ++   A A+ +A + +E +   +   LT+  Q  V  P +    N I  Y+  L  
Sbjct: 417 LKMDESGAVAFASQFADRPDEYHFSTVCFFLTIAAQRLVIPPLM----NQISEYSRHLKE 472

Query: 218 FESKINPLSLVETLLISWNSMSTREMLSHSLRRWKRKLQ*MMKHWLCVR 364
            + KIN L      +  +      + L++    WK     M +H LCV+
Sbjct: 473 LKHKINALKEKLNTVSGFERAEVEKKLNYETEHWKL----MSRHLLCVK 517


>AC024791-24|AAF60656.1|  627|Caenorhabditis elegans Hypothetical
           protein Y47G6A.4 protein.
          Length = 627

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 15/30 (50%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
 Frame = +1

Query: 160 SGPAEGRQPHTVVQ*LFDHLRKQN-KSPII 246
           +GPA+G +P+ V + L  HL KQ+ KSPI+
Sbjct: 279 NGPADGCEPYEVFEWL-QHLLKQHPKSPIL 307


>U64842-10|AAB37080.1|  402|Caenorhabditis elegans Hypothetical
           protein F25B4.1 protein.
          Length = 402

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 8/24 (33%), Positives = 17/24 (70%)
 Frame = +1

Query: 253 DIAHIVEQYVNKRDAVTFLEKVET 324
           D++H+++ Y+  +D V F+E + T
Sbjct: 73  DVSHMLQTYITGKDRVAFIESLTT 96


>AC024882-8|AAF60931.2|  340|Caenorhabditis elegans Seven tm
           receptor protein 168 protein.
          Length = 340

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -2

Query: 493 TYKIVRELESHHQHLRVYCLNVQLFSRL 410
           +YK+VREL  H +    Y L  QLF  L
Sbjct: 225 SYKLVRELPKHGESEYTYKLQSQLFKAL 252


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,135,770
Number of Sequences: 27780
Number of extensions: 304046
Number of successful extensions: 1014
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)