Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40167
         (605 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              23   1.8  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   4.1  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   5.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   5.4  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   5.4  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    22   5.4  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   5.4  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   7.1  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   9.4  

>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/20 (40%), Positives = 16/20 (80%)
 Frame = -3

Query: 231 ILLSKVVKKLLYNCMRLSPL 172
           ++ +++  KLL NC+R+SP+
Sbjct: 19  VIPAELTAKLLGNCVRVSPV 38


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 596 QWQVGPHPRRRTQRTESCAVVTA 528
           Q Q G HPR++ Q  +   VVT+
Sbjct: 216 QSQPGMHPRQQQQAQQHQGVVTS 238


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -3

Query: 297 SISLVDILFHDMSNVSTNDRGFILLSKVVKKLLY 196
           + SLV   ++D     T D+ F+L  K V  LLY
Sbjct: 15  AFSLVGAEYYD---TKTADKDFLLKQKKVYNLLY 45


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -3

Query: 297 SISLVDILFHDMSNVSTNDRGFILLSKVVKKLLY 196
           + SLV   ++D     T D+ F+L  K V  LLY
Sbjct: 15  AFSLVGAEYYD---TKTADKDFLLKQKKVYNLLY 45


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +3

Query: 237 PYHWLRHCSYRGTVCQQERCCHIP*EGGNESYN 335
           P+H + + +     C QER  + P   G E +N
Sbjct: 85  PWHGVLNATVLPNSCYQERYEYFPGFPGEEMWN 117


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 65  PALAADWAKLEELYNK 112
           P LAA+ AKLEE+  K
Sbjct: 287 PKLAANRAKLEEIAGK 302


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +3

Query: 237 PYHWLRHCSYRGTVCQQERCCHIP*EGGNESYN 335
           P+H + + +     C QER  + P   G E +N
Sbjct: 85  PWHGVLNATVLPNSCYQERYEYFPGFPGEEMWN 117


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 406 DAAEKIIEHLDSTLEDAD 459
           D  EK+I+ LD    D+D
Sbjct: 369 DIQEKVIQELDEIFGDSD 386


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 219 SKAK*IPYHWLRHCSYRGT 275
           S+ K +PY+W ++   R T
Sbjct: 290 SRKKVLPYYWYKYQDRRDT 308


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,476
Number of Sequences: 438
Number of extensions: 4034
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)