Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40165
(762 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g57720.1 68414.m06549 elongation factor 1B-gamma, putative / ... 73 2e-13
At1g09640.1 68414.m01081 elongation factor 1B-gamma, putative / ... 72 5e-13
At1g02930.1 68414.m00260 glutathione S-transferase, putative sim... 45 6e-05
At4g02520.1 68417.m00345 glutathione S-transferase, putative 44 8e-05
At2g02930.1 68415.m00241 glutathione S-transferase, putative 44 1e-04
At2g02380.1 68415.m00176 glutathione S-transferase, putative sim... 42 3e-04
At1g02920.1 68414.m00259 glutathione S-transferase, putative sim... 42 6e-04
At2g02390.2 68415.m00177 glutathione S-transferase zeta 1 (GSTZ1... 41 0.001
At2g02390.1 68415.m00178 glutathione S-transferase zeta 1 (GSTZ1... 41 0.001
At1g02940.1 68414.m00261 glutathione S-transferase, putative sim... 38 0.006
At2g02390.3 68415.m00179 glutathione S-transferase zeta 1 (GSTZ1... 38 0.010
At1g02950.2 68414.m00263 glutathione S-transferase, putative sim... 38 0.010
At1g02950.1 68414.m00262 glutathione S-transferase, putative sim... 38 0.010
At5g44000.1 68418.m05384 glutathione S-transferase C-terminal do... 36 0.022
At2g33000.1 68415.m04044 ubiquitin-associated (UBA)/TS-N domain-... 33 0.27
At1g30230.1 68414.m03698 elongation factor 1-beta / EF-1-beta id... 31 0.84
At3g60970.1 68416.m06823 ABC transporter family protein ABC tran... 30 1.9
At3g60160.1 68416.m06717 ABC transporter family protein similar ... 30 1.9
At2g18110.1 68415.m02105 elongation factor 1-beta, putative / EF... 30 1.9
At5g46550.1 68418.m05731 DNA-binding bromodomain-containing prot... 29 2.6
At1g16840.2 68414.m02028 expressed protein 29 2.6
At5g07270.1 68418.m00829 ankyrin repeat family protein contains ... 29 4.5
At4g22130.1 68417.m03199 protein kinase family protein contains ... 29 4.5
At3g06550.1 68416.m00761 O-acetyltransferase-related similar to ... 28 7.8
>At1g57720.1 68414.m06549 elongation factor 1B-gamma, putative /
eEF-1B gamma, putative similar to elongation factor 1B
gamma GI:3868758 from [Oryza sativa]
Length = 413
Score = 73.3 bits (172), Expect = 2e-13
Identities = 37/77 (48%), Positives = 52/77 (67%)
Frame = +3
Query: 12 VLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGK 191
V++TY N A KALIAA+Y+G ++ + +F G TNKS +FLK P GKVP E+ +G
Sbjct: 4 VMHTYKGNKGANKALIAAEYAGVKIEESADFQMGVTNKSPEFLKMNPIGKVPVLETPEGP 63
Query: 192 VLLTESNAIAYYVANES 242
+ ESNAIA YV+ ++
Sbjct: 64 IF--ESNAIARYVSRKN 78
Score = 53.6 bits (123), Expect = 1e-07
Identities = 30/91 (32%), Positives = 44/91 (48%)
Frame = +2
Query: 254 NLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLL 433
+L A + QW +S E+ W P +G F+ E A S L L+ L+ HL
Sbjct: 87 SLIEYAHIEQWIDFSSLEIDANMLKWFAPRMGYAPFSAPAEEAAISALKRGLEALNTHLA 146
Query: 434 TRTFLVTERITLADVIVFSTLLHAFSTC*TR 526
+ TFLV +TLAD++ L F+T T+
Sbjct: 147 SNTFLVGHSVTLADIVTICNLNLGFATVMTK 177
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +1
Query: 505 FQHVLDPSVRSSLINVQRWFLTVAHQPQVSGVVGSLTLCAGPPTYDPKK 651
F V+ S+ +V+R+F T+ +QP+ V+G P KK
Sbjct: 171 FATVMTKKFTSAFPHVERYFWTMVNQPEFKKVLGDAKQTEAVPPVPTKK 219
>At1g09640.1 68414.m01081 elongation factor 1B-gamma, putative /
eEF-1B gamma, putative Similar to elongation factor
1-gamma (gb|EF1G_XENLA). ESTs
gb|T20564,gb|T45940,gb|T04527 come from this gene
Length = 414
Score = 71.7 bits (168), Expect = 5e-13
Identities = 39/74 (52%), Positives = 47/74 (63%)
Frame = +3
Query: 12 VLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGK 191
VL+TY N A KALIAA+Y G + V +F G TNK+ FLK P GKVP E+ +G
Sbjct: 4 VLHTYKGNKSAEKALIAAEYVGVQIDVPSDFQMGVTNKTPAFLKMNPIGKVPVLETPEGS 63
Query: 192 VLLTESNAIAYYVA 233
V ESNAIA YV+
Sbjct: 64 VF--ESNAIARYVS 75
Score = 57.2 bits (132), Expect = 1e-08
Identities = 32/91 (35%), Positives = 47/91 (51%)
Frame = +2
Query: 254 NLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLL 433
+L A++ QW +S E+ + W P +G M ++ E A S L AL L+ HL
Sbjct: 87 SLIEYAQIEQWIDFSSLEIYASILRWFGPRMGFMPYSAPAEEGAISTLKRALDALNTHLT 146
Query: 434 TRTFLVTERITLADVIVFSTLLHAFSTC*TR 526
+ T+LV ITLAD+I L F+T T+
Sbjct: 147 SNTYLVGHSITLADIITVCNLNLGFATVMTK 177
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +1
Query: 505 FQHVLDPSVRSSLINVQRWFLTVAHQPQVSGVVGSLTLCAGPPTYDPKK 651
F V+ S +V+R+F TV +QP + V+G + P KK
Sbjct: 171 FATVMTKKFTSEFPHVERYFWTVVNQPNFTKVLGDVKQTEAVPPIASKK 219
>At1g02930.1 68414.m00260 glutathione S-transferase, putative
similar to glutathione S-transferase GI:860955 from
[Hyoscyamus muticus]
Length = 208
Score = 44.8 bits (101), Expect = 6e-05
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +3
Query: 6 AGV-LYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESA 182
AG+ ++ +P + + LIA D + + +K E F+ + P GKVPAFE
Sbjct: 2 AGIKVFGHPASTATRRVLIALHEKNVDFEFVHVELKDGEHKKEPFILRNPFGKVPAFEDG 61
Query: 183 DGKVLLTESNAIAYYVANE 239
D K+ ES AI Y+A+E
Sbjct: 62 DFKIF--ESRAITQYIAHE 78
>At4g02520.1 68417.m00345 glutathione S-transferase, putative
Length = 212
Score = 44.4 bits (100), Expect = 8e-05
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +3
Query: 6 AGV-LYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESA 182
AG+ ++ +P + + LIA D ++ + +K E FL + P G+VPAFE
Sbjct: 2 AGIKVFGHPASIATRRVLIALHEKNLDFELVHVELKDGEHKKEPFLSRNPFGQVPAFE-- 59
Query: 183 DGKVLLTESNAIAYYVAN 236
DG + L ES AI Y+A+
Sbjct: 60 DGDLKLFESRAITQYIAH 77
>At2g02930.1 68415.m00241 glutathione S-transferase, putative
Length = 212
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +3
Query: 6 AGV-LYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESA 182
AG+ ++ +P + + LIA D ++ + +K E FL + P G+VPAFE
Sbjct: 2 AGIKVFGHPASTSTRRVLIALHEKNLDFELVHVELKDGEHKKEPFLSRNPFGQVPAFE-- 59
Query: 183 DGKVLLTESNAIAYYVAN 236
DG + L ES AI Y+A+
Sbjct: 60 DGDLKLFESRAITQYIAH 77
>At2g02380.1 68415.m00176 glutathione S-transferase, putative
similar to gi:167970 gb:AAA72320 gb:AY052332
Length = 223
Score = 42.3 bits (95), Expect = 3e-04
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Frame = +3
Query: 15 LYTYPENFRAYKALIAAQYSGTDVKVAP-NFVFGETNKSEDFLKKFPAGKVPAFESADGK 191
LY+Y + A++ IA G D + P N + G+ + S DF K P G VPA DG
Sbjct: 14 LYSYWRSSCAHRVRIALTLKGLDYEYIPVNLLKGDQSDS-DFKKINPMGTVPAL--VDGD 70
Query: 192 VLLTESNAIAYYVANESLRGGIWLPKPVSGSGHHGLTVNYCLLPVLGSSL 341
V++ +S AI Y+ ++ + P+ S +H VNY ++ S +
Sbjct: 71 VVINDSFAIIMYLDDK------YPEPPLLPSDYHKRAVNYQATSIVMSGI 114
>At1g02920.1 68414.m00259 glutathione S-transferase, putative
similar to glutathione S-transferase GI:860955 from
[Hyoscyamus muticus]; supported by cDNA GI:443697.
Length = 209
Score = 41.5 bits (93), Expect = 6e-04
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +3
Query: 6 AGV-LYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESA 182
AG+ ++ +P + + LIA D + + +K E F+ + P GKVPAFE
Sbjct: 2 AGIKVFGHPASTATRRVLIALHEKNLDFEFVHIELKDGEHKKEPFIFRNPFGKVPAFE-- 59
Query: 183 DGKVLLTESNAIAYYVAN 236
DG L ES AI Y+A+
Sbjct: 60 DGDFKLFESRAITQYIAH 77
>At2g02390.2 68415.m00177 glutathione S-transferase zeta 1 (GSTZ1)
(GST18) identical to SP|Q9ZVQ3|GTZ1_ARATH Glutathione
S-transferase zeta-class 1 (EC 2.5.1.18) (AtGSTZ1)
(Maleylacetone isomerase) (EC 5.2.1.-) (MAI)
{Arabidopsis thaliana}; contains Pfam profiles PF02798:
Glutathione S-transferase, N-terminal domain and
PF00043:Glutathione S-transferase, C-terminal domain
Length = 191
Score = 40.7 bits (91), Expect = 0.001
Identities = 40/134 (29%), Positives = 60/134 (44%), Gaps = 5/134 (3%)
Frame = +3
Query: 15 LYTYPENFRAYKALIAAQYSGTDVKVAP-NFVFGETNKSEDFLKKFPAGKVPAFESADGK 191
LY+Y + A++ IA G D + P N + G+ S DF K P G VPA DG
Sbjct: 11 LYSYWRSSCAHRVRIALALKGLDYEYIPVNLLKGDQFDS-DFKKINPMGTVPAL--VDGD 67
Query: 192 VLLTESNAIAYYVANESLRGGIWLPKPVSGSGHHGLTVNYCLLPVLGSSL----TLVSCN 359
V++ +S AI Y+ +E LP+ + H VNY + ++ S + L
Sbjct: 68 VVINDSFAIIMYL-DEKYPEPPLLPRDL-----HKRAVNYQAMSIVLSGIQPHQNLAVIR 121
Query: 360 STNRMLNVQSLTYW 401
+NV+ T W
Sbjct: 122 YIEEKINVEEKTAW 135
>At2g02390.1 68415.m00178 glutathione S-transferase zeta 1 (GSTZ1)
(GST18) identical to SP|Q9ZVQ3|GTZ1_ARATH Glutathione
S-transferase zeta-class 1 (EC 2.5.1.18) (AtGSTZ1)
(Maleylacetone isomerase) (EC 5.2.1.-) (MAI)
{Arabidopsis thaliana}; contains Pfam profiles PF02798:
Glutathione S-transferase, N-terminal domain and
PF00043:Glutathione S-transferase, C-terminal domain
Length = 221
Score = 40.7 bits (91), Expect = 0.001
Identities = 40/134 (29%), Positives = 60/134 (44%), Gaps = 5/134 (3%)
Frame = +3
Query: 15 LYTYPENFRAYKALIAAQYSGTDVKVAP-NFVFGETNKSEDFLKKFPAGKVPAFESADGK 191
LY+Y + A++ IA G D + P N + G+ S DF K P G VPA DG
Sbjct: 11 LYSYWRSSCAHRVRIALALKGLDYEYIPVNLLKGDQFDS-DFKKINPMGTVPAL--VDGD 67
Query: 192 VLLTESNAIAYYVANESLRGGIWLPKPVSGSGHHGLTVNYCLLPVLGSSL----TLVSCN 359
V++ +S AI Y+ +E LP+ + H VNY + ++ S + L
Sbjct: 68 VVINDSFAIIMYL-DEKYPEPPLLPRDL-----HKRAVNYQAMSIVLSGIQPHQNLAVIR 121
Query: 360 STNRMLNVQSLTYW 401
+NV+ T W
Sbjct: 122 YIEEKINVEEKTAW 135
>At1g02940.1 68414.m00261 glutathione S-transferase, putative
similar to glutathione S-transferase GI:860955 from
[Hyoscyamus muticus]
Length = 256
Score = 38.3 bits (85), Expect = 0.006
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +3
Query: 15 LYTYPENFRAYKALIAAQYSGTDVK-VAPNFVFGETNKSEDFLKKFPAGKVPAFESADGK 191
+Y YP + + L G + N + G+ K FL P G+VP F DG
Sbjct: 41 IYGYPYSTNTRRVLAVLHEKGLSYDPITVNLIAGD-QKKPSFLAINPFGQVPVF--LDGG 97
Query: 192 VLLTESNAIAYYVA 233
+ LTES AI+ Y+A
Sbjct: 98 LKLTESRAISEYIA 111
>At2g02390.3 68415.m00179 glutathione S-transferase zeta 1 (GSTZ1)
(GST18) identical to SP|Q9ZVQ3|GTZ1_ARATH Glutathione
S-transferase zeta-class 1 (EC 2.5.1.18) (AtGSTZ1)
(Maleylacetone isomerase) (EC 5.2.1.-) (MAI)
{Arabidopsis thaliana}; contains Pfam profiles PF02798:
Glutathione S-transferase, N-terminal domain and
PF00043:Glutathione S-transferase, C-terminal domain
Length = 228
Score = 37.5 bits (83), Expect = 0.010
Identities = 40/140 (28%), Positives = 61/140 (43%), Gaps = 11/140 (7%)
Frame = +3
Query: 15 LYTYPENFRAYKALIAAQYSGTDVKVAP-NFVFGETNKS------EDFLKKFPAGKVPAF 173
LY+Y + A++ IA G D + P N + G+ S +DF K P G VPA
Sbjct: 11 LYSYWRSSCAHRVRIALALKGLDYEYIPVNLLKGDQFDSVYRFDLQDFKKINPMGTVPAL 70
Query: 174 ESADGKVLLTESNAIAYYVANESLRGGIWLPKPVSGSGHHGLTVNYCLLPVLGSSL---- 341
DG V++ +S AI Y+ +E LP+ + H VNY + ++ S +
Sbjct: 71 --VDGDVVINDSFAIIMYL-DEKYPEPPLLPRDL-----HKRAVNYQAMSIVLSGIQPHQ 122
Query: 342 TLVSCNSTNRMLNVQSLTYW 401
L +NV+ T W
Sbjct: 123 NLAVIRYIEEKINVEEKTAW 142
>At1g02950.2 68414.m00263 glutathione S-transferase, putative
similar to glutathione-S-transferase GI:169887 from
[Silene vulgaris]
Length = 245
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +3
Query: 120 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVA 233
+K+E FL P G+VP FE DG V L ES AI Y+A
Sbjct: 64 HKTEPFLSLNPFGQVPVFE--DGSVKLYESRAITQYIA 99
>At1g02950.1 68414.m00262 glutathione S-transferase, putative
similar to glutathione-S-transferase GI:169887 from
[Silene vulgaris]
Length = 243
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +3
Query: 120 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVA 233
+K+E FL P G+VP FE DG V L ES AI Y+A
Sbjct: 62 HKTEPFLSLNPFGQVPVFE--DGSVKLYESRAITQYIA 97
>At5g44000.1 68418.m05384 glutathione S-transferase C-terminal
domain-containing protein contains Pfam domain PF00043:
Glutathione S-transferase, C-terminal domain
Length = 399
Score = 36.3 bits (80), Expect = 0.022
Identities = 16/46 (34%), Positives = 31/46 (67%)
Frame = +2
Query: 362 NKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLL 499
+++ + A ++L + L ++ HL + +L ER+TLADV +F+TL+
Sbjct: 261 SQEAYDGAVNELFSTLDEIEDHLGSNRYLCGERLTLADVCLFTTLI 306
>At2g33000.1 68415.m04044 ubiquitin-associated (UBA)/TS-N
domain-containing protein-related contains weak hit to
Pfam F00627: UBA/TS-N domain; supported by tandem
duplication of ubiquitin-associated (UBA)/TS-N domain
protein (GI:2924790) (TIGR_Ath1:At2g33010) [Arabidopsis
thaliana]
Length = 508
Score = 32.7 bits (71), Expect = 0.27
Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
Frame = +3
Query: 345 LVSCNSTNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRES--HLPMSLSSVHCCMLSARA 518
L++ + N N +S + WPP K W D H + E+ +L S + + + R+
Sbjct: 195 LMASSQVNTQENQESTSVWPPMKTWVDRICHETKVSREEAFYYLEGSKWNFSRAVEACRS 254
Query: 519 RPERPFVADKRSALVPDRRPPATSVGRRRLAHALC 623
+ A + SA P P S+ + + C
Sbjct: 255 KTLPVVSASQESAEAPPNSPEQPSLLKNEWISSFC 289
>At1g30230.1 68414.m03698 elongation factor 1-beta / EF-1-beta
identical to SP|P48006 Elongation factor 1-beta
(EF-1-beta) {Arabidopsis thaliana}
Length = 231
Score = 31.1 bits (67), Expect = 0.84
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 401 AALKVLDGHLLTRTFLVTERITLADVIVFSTL 496
A LK LD HLLTR+++ + + D+ VF+ L
Sbjct: 11 AGLKKLDEHLLTRSYITGYQASKDDITVFAAL 42
>At3g60970.1 68416.m06823 ABC transporter family protein ABC
transporter-like proteins
Length = 1037
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +3
Query: 210 NAIAYYVANESLRGGIWLPKPVSGSGHHGLTVNYCL-LPVLGSSLTLVSCNSTNRMLNVQ 386
N ++++V SL + LP+ V GL V Y L L VL +++ CN+ N+M++V+
Sbjct: 696 NLLSHFVFAFSLVLLVTLPEGVINPSIAGLGVTYGLSLNVLQATVIWNICNAENKMISVE 755
Query: 387 SL 392
+
Sbjct: 756 RI 757
>At3g60160.1 68416.m06717 ABC transporter family protein similar to
ATP-binding cassette transporter MRP8 GI:18031899 from
[Arabidopsis thaliana]
Length = 1490
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +3
Query: 210 NAIAYYVANESLRGGIWLPKPVSGSGHHGLTVNYCL-LPVLGSSLTLVSCNSTNRMLNVQ 386
N ++++V SL + LP+ V GL V Y L L VL +++ CN+ N+M++V+
Sbjct: 1149 NLLSHFVFAFSLVLLVTLPEGVINPSIAGLGVTYGLSLNVLQATVIWNICNAENKMISVE 1208
Query: 387 SL 392
+
Sbjct: 1209 RI 1210
>At2g18110.1 68415.m02105 elongation factor 1-beta, putative /
EF-1-beta, putative nearly identical to eEF-1beta
[Arabidopsis thaliana] GI:398606
Length = 231
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 401 AALKVLDGHLLTRTFLVTERITLADVIVFSTL 496
+ LK LD HLLTR+++ + + D+ VF+ L
Sbjct: 11 SGLKKLDEHLLTRSYITGYQASKDDITVFTAL 42
>At5g46550.1 68418.m05731 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 494
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 51 ALIAAQYSGTDVKVAPNFVFGETNKSE 131
A++ AQY+GT +K V G+ NK++
Sbjct: 342 AILKAQYAGTIIKAKHRIVLGQNNKAD 368
>At1g16840.2 68414.m02028 expressed protein
Length = 161
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = +3
Query: 258 WLPKPVSGSGHHGLTVNYCLLPVLGSSLTLVSCNSTNRMLNVQSLTYWPP*KYWT 422
W+P P SGS HG+ L+ L + LT STN S Y+ YW+
Sbjct: 89 WVPPPGSGSQSHGIAQ---LVVKLANPLTHEESLSTNSSHGWPSSDYFLKGSYWS 140
>At5g07270.1 68418.m00829 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 513
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
Frame = +3
Query: 378 NVQSLTYWPP*-------KYWTDIFSHAPSLLPRESHLPMSLSSVHCCML 506
NV S+T PP ++ F PS L RE LPMSL CML
Sbjct: 344 NVPSVTVGPPGSIPCPLCRHGITAFKRLPSSLTREMKLPMSLGFCAPCML 393
>At4g22130.1 68417.m03199 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 338
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Frame = +3
Query: 39 RAYKALIAAQYSGTDVKVAPNF-----VFGETNKSEDFLKKFPAGKVPAFESADGKVL-L 200
R + A+QY+ + ++VA N + GE + + +FP GK+ A + D L L
Sbjct: 8 RIRSPITASQYTVSSLQVATNSFSQENIIGEGSLGRVYRAEFPNGKIMAIKKIDNAALSL 67
Query: 201 TESNAIAYYVANES 242
E + V+N S
Sbjct: 68 QEEDNFLEAVSNMS 81
>At3g06550.1 68416.m00761 O-acetyltransferase-related similar to
O-acetyltransferase (GI:17063556) [Cryptococcus
neoformans var. neoformans]; contains 7 transmembrane
domains
Length = 419
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 428 LLTRTFLVTERITLADVIVFSTLLHAFSTC 517
LL +FLV R+TL +I F+ L+ F C
Sbjct: 93 LLDESFLVENRLTLRAIIEFAVLMVYFYIC 122
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,839,556
Number of Sequences: 28952
Number of extensions: 374929
Number of successful extensions: 1058
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1702303248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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