Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40164
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.36 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   3.3  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   4.4  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   4.4  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   7.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 25/112 (22%), Positives = 47/112 (41%)
 Frame = +2

Query: 251 FSYQLIYSLHILFVLFCLY*VILVIYLCVPAMVKIGTSKCWYY*C***CCTLCVPYK*FG 430
           +   + +++H+LF+L   Y  + +++ C   +  +    C YY        LCV Y    
Sbjct: 60  YCVSITFNVHLLFLLCSGYFTVHLLFYCPFIIFTVHFLLCTYYFYYAFIILLCVYY---- 115

Query: 431 FYRKFPELTSNGFVFL*LRAYCRPWAFQLHQDRYLERIFVRYIVFSSKILLL 586
           FY  F   T +    L +  +  P  F L     +   +  +I+F+  +L L
Sbjct: 116 FYYAFIIFTVHLLFLLCIYYFVVPLFFLL----CIYYFYCAFIIFTVHLLFL 163



 Score = 25.0 bits (52), Expect = 0.63
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 269 YSLHILFVLFCLY*VILVIYLCV 337
           YS  I+F +  L+  +L+I LC+
Sbjct: 216 YSAFIIFTIHLLFYCVLIILLCI 238



 Score = 21.4 bits (43), Expect = 7.7
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +1

Query: 217 HLIALAHKTS*LFLPINLQFT-HTVCFILFILSNTCHIPLCTRY 345
           + +++      LFL  +  FT H + +  FI+  T H  LCT Y
Sbjct: 60  YCVSITFNVHLLFLLCSGYFTVHLLFYCPFIIF-TVHFLLCTYY 102


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 7/45 (15%), Positives = 24/45 (53%)
 Frame = +3

Query: 195 IALKMHVSSYSFST*DFMTFLTN*STVYTYCLFYFVYIE*YLSYT 329
           + + ++  +Y+F   +   +++    V+ +C F +++   Y+ Y+
Sbjct: 118 LLINLYTINYNFKESERNDYVSLLQLVFVFCYFIYLFTVYYIYYS 162


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 5/21 (23%), Positives = 16/21 (76%)
 Frame = +2

Query: 263 LIYSLHILFVLFCLY*VILVI 325
           +IY+ ++ ++ FC Y +++++
Sbjct: 315 VIYTFNLFYLCFCFYWLLVMV 335


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 5/21 (23%), Positives = 16/21 (76%)
 Frame = +2

Query: 263 LIYSLHILFVLFCLY*VILVI 325
           +IY+ ++ ++ FC Y +++++
Sbjct: 271 VIYTFNLFYLCFCFYWLLVMV 291


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +1

Query: 427 WILSKISRANLKRFCFFMI 483
           + LSK+S+  L +FC F++
Sbjct: 171 YTLSKMSQVMLIQFCAFVV 189


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,324
Number of Sequences: 336
Number of extensions: 3571
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)