Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40161
         (650 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83221-9|CAB05710.1|  400|Caenorhabditis elegans Hypothetical pr...    33   0.18 
Z82095-8|CAB05029.1|  400|Caenorhabditis elegans Hypothetical pr...    33   0.18 
Z92825-4|CAB07312.1|  467|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>Z83221-9|CAB05710.1|  400|Caenorhabditis elegans Hypothetical
           protein C49A1.2 protein.
          Length = 400

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
 Frame = -1

Query: 284 ATELCTLRRCSTFPGYINPIAVFNHVTVHLYLPHPGVFSPKTLPTNQFQTTAANAHRATS 105
           A  +    + ++ P ++N   V N   V L L   G F P  L   Q    A        
Sbjct: 201 AFSILRTEKLNSNPQFMNAWNVINDWQVKLTLLRNGDFIPIPLAYPQAVFLAVRF----- 255

Query: 104 YIFICIYVMQHLYFSFSHSIN--FPTISGFKLYAVI 3
           Y  +C++  QHL  S  H+I+  FP ++ F+   ++
Sbjct: 256 YFLVCLFTRQHLDLSDHHAIDYFFPLLTSFQFIFIV 291


>Z82095-8|CAB05029.1|  400|Caenorhabditis elegans Hypothetical
           protein C49A1.2 protein.
          Length = 400

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
 Frame = -1

Query: 284 ATELCTLRRCSTFPGYINPIAVFNHVTVHLYLPHPGVFSPKTLPTNQFQTTAANAHRATS 105
           A  +    + ++ P ++N   V N   V L L   G F P  L   Q    A        
Sbjct: 201 AFSILRTEKLNSNPQFMNAWNVINDWQVKLTLLRNGDFIPIPLAYPQAVFLAVRF----- 255

Query: 104 YIFICIYVMQHLYFSFSHSIN--FPTISGFKLYAVI 3
           Y  +C++  QHL  S  H+I+  FP ++ F+   ++
Sbjct: 256 YFLVCLFTRQHLDLSDHHAIDYFFPLLTSFQFIFIV 291


>Z92825-4|CAB07312.1|  467|Caenorhabditis elegans Hypothetical
           protein C13C4.6 protein.
          Length = 467

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = -1

Query: 167 PKTLPTNQFQTTAANAHRATSYIFICIYVMQHLYFSFSHSINFPTISG 24
           PKT P+   Q  ++     TS IF C+   Q L   F +SINF   +G
Sbjct: 220 PKTPPSASSQHESSGP--VTSGIFKCLKDRQFLIQIFVYSINFAIANG 265


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,963,721
Number of Sequences: 27780
Number of extensions: 322942
Number of successful extensions: 945
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)