Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40159
(621 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48737| Best HMM Match : WD40 (HMM E-Value=1.5e-36) 69 3e-12
SB_3361| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.020
SB_14111| Best HMM Match : WD40 (HMM E-Value=6.2e-30) 35 0.061
SB_8844| Best HMM Match : WD40 (HMM E-Value=2.5e-28) 35 0.061
SB_14705| Best HMM Match : WD40 (HMM E-Value=3.6e-20) 33 0.14
SB_842| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_42380| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.57
SB_22526| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.57
SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.57
SB_37875| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.75
SB_6763| Best HMM Match : WD40 (HMM E-Value=4.6e-24) 31 0.75
SB_21573| Best HMM Match : WD40 (HMM E-Value=4.1e-32) 31 1.00
SB_47540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.00
SB_40185| Best HMM Match : WD40 (HMM E-Value=0) 31 1.00
SB_26977| Best HMM Match : WD40 (HMM E-Value=1.9e-10) 30 1.3
SB_33706| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_42943| Best HMM Match : WD40 (HMM E-Value=0) 29 2.3
SB_17662| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_34753| Best HMM Match : WD40 (HMM E-Value=5.3e-20) 29 2.3
SB_32324| Best HMM Match : WD40 (HMM E-Value=6.4e-21) 29 2.3
SB_10949| Best HMM Match : WD40 (HMM E-Value=3.1e-10) 29 2.3
SB_54574| Best HMM Match : WD40 (HMM E-Value=0) 29 3.0
SB_11169| Best HMM Match : WD40 (HMM E-Value=5.5001e-42) 29 3.0
SB_39225| Best HMM Match : NIF (HMM E-Value=0) 29 4.0
SB_17672| Best HMM Match : ERM (HMM E-Value=0.13) 29 4.0
SB_7743| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_48353| Best HMM Match : Erp_C (HMM E-Value=2.6) 28 5.3
SB_40766| Best HMM Match : WD40 (HMM E-Value=1.19993e-41) 28 5.3
SB_40159| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_30516| Best HMM Match : GETHR (HMM E-Value=0.9) 28 5.3
SB_17245| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_35075| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_30230| Best HMM Match : CH (HMM E-Value=0.0035) 28 7.0
SB_27661| Best HMM Match : Ubie_methyltran (HMM E-Value=0.58) 28 7.0
SB_41443| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_32192| Best HMM Match : Guanylin (HMM E-Value=4.9) 28 7.0
SB_54594| Best HMM Match : Ank (HMM E-Value=4.4e-11) 27 9.3
SB_58364| Best HMM Match : WD40 (HMM E-Value=2.8026e-45) 27 9.3
SB_57129| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 27 9.3
SB_51986| Best HMM Match : HLH (HMM E-Value=0.15) 27 9.3
SB_43370| Best HMM Match : RhoGAP (HMM E-Value=1.6e-18) 27 9.3
>SB_48737| Best HMM Match : WD40 (HMM E-Value=1.5e-36)
Length = 885
Score = 68.9 bits (161), Expect = 3e-12
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +2
Query: 14 ANEDYNLYTFDVRRLKEPVAIHMDHTSAVIDVDYAPTGR 130
ANED NLYT+D+RRL + V +HMDH SAV+DVDYAPTGR
Sbjct: 327 ANEDSNLYTYDMRRLDQAVNVHMDHVSAVLDVDYAPTGR 365
Score = 59.7 bits (138), Expect = 2e-09
Identities = 32/70 (45%), Positives = 40/70 (57%)
Frame = +1
Query: 292 RMWKARASEKLGVLKPRERQALNYAEALKEKFATHPQVKRIARHRHVPKHILNAQKELRT 471
R+WKA AS+KLG L PRER A Y+ L+E+F HPQ+ RI R +I Q R
Sbjct: 389 RIWKAEASKKLGTLAPRERAAFTYSARLRERFKFHPQISRIRR------NICGRQDRKRR 442
Query: 472 IREKTKRKEA 501
KT +K A
Sbjct: 443 KNSKTLKKYA 452
>SB_3361| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 247
Score = 36.3 bits (80), Expect = 0.020
Identities = 24/70 (34%), Positives = 39/70 (55%)
Frame = +2
Query: 2 SLQLANEDYNLYTFDVRRLKEPVAIHMDHTSAVIDVDYAPTGREFVAGSYDKTIRIFQND 181
SL A++D +L + V R K +++ H + V ++P GR V+GS DKTI+++
Sbjct: 42 SLLTASDDKSLKVWTVHRQKFLYSLNA-HMNWVRCAKFSPDGRLIVSGSDDKTIKLWDRT 100
Query: 182 KGHSRDVYHT 211
S+D HT
Sbjct: 101 ---SKDCVHT 107
>SB_14111| Best HMM Match : WD40 (HMM E-Value=6.2e-30)
Length = 1093
Score = 34.7 bits (76), Expect = 0.061
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +2
Query: 68 VAIHMDHTSAVIDVDYAPTGREFVAGSYDKTIRIFQNDKGHSRDVYHTKRMQRLTCVKW 244
V H H AV DV ++P G + ++ YDK+ R+ G ++H + +TCV++
Sbjct: 241 VKSHTFHGGAVKDVKWSPGGMQLLSCGYDKSSRLIDIHTGCQVSLFH--QNDYVTCVQY 297
>SB_8844| Best HMM Match : WD40 (HMM E-Value=2.5e-28)
Length = 539
Score = 34.7 bits (76), Expect = 0.061
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 20 EDYNLYTFDVRRLKEPVAIHMDHTSAVIDVDYAPTGREFVAGSYDKTIR 166
ED++++ D+ + V H + + DV ++P GR ++ S D TIR
Sbjct: 431 EDFSIHIADIE-MHRIVRTFTGHANRITDVSFSPDGRWLISSSMDSTIR 478
>SB_14705| Best HMM Match : WD40 (HMM E-Value=3.6e-20)
Length = 215
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +2
Query: 2 SLQLANEDYNLYTFDVRRLKEPVAIHMDHTSAVIDVDYAPTGREFVAGSYDKTIR 166
S ++D + +D R LK V + HTS V ++Y + V ++D TIR
Sbjct: 125 SFLTCSDDKTICLWDARNLKSNVFSLVGHTSWVKSIEYCRESGKLVTSAFDDTIR 179
>SB_842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = +1
Query: 349 QALNYAEALKEKFATHPQVKRIAR----HRHVPKHILNAQKELRTIREKTKRKEANRPPT 516
Q L + ++EK A +R++ R++P +LN + R E+ +E +R P
Sbjct: 249 QKLGNIKQVREKLAKTSGAERVSNGIRFQRYIPNGVLNVVRRPRRGEEQNNEEERSRRPR 308
Query: 517 VKRGQYQLCLRKRDMSL 567
V + ++ R+RD+ L
Sbjct: 309 VLTEEQRVRQRQRDLVL 325
>SB_42380| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1430
Score = 31.5 bits (68), Expect = 0.57
Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +1
Query: 247 SRYKYVMSGSDEMNIRMWKARASEKLGVLKPRERQAL---NYAEALKEKFATHPQVKRIA 417
+R +Y++S ++ W+ + P + L ++++ E THP VKR+A
Sbjct: 75 TRDRYIVSALGSCGVQEWRIIKRDNPAADYPSDFSLLRIVDHSQLGVEALLTHPMVKRVA 134
Query: 418 RHRHVPKHILNAQK 459
R V + + + Q+
Sbjct: 135 PQRRVQRFLRSVQE 148
>SB_22526| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 666
Score = 31.5 bits (68), Expect = 0.57
Identities = 28/107 (26%), Positives = 49/107 (45%)
Frame = +1
Query: 226 INLREMVSRYKYVMSGSDEMNIRMWKARASEKLGVLKPRERQALNYAEALKEKFATHPQV 405
INL+E V+ + V SD + +W+ ++K G E++ + E LK H
Sbjct: 215 INLKEKVTGEQQVREFSDHRVMELWEK--AKKKGFT---EQELHSIKEELKH--FDH--- 264
Query: 406 KRIARHRHVPKHILNAQKELRTIREKTKRKEANRPPTVKRGQYQLCL 546
+I++H H K +L ++ L E + E + + G+YQ L
Sbjct: 265 -KISKHEHYKKQVLESEARLAEGEELSHDHEELKQKEKQHGRYQAVL 310
>SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 459
Score = 31.5 bits (68), Expect = 0.57
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +2
Query: 14 ANEDYNLYTFDVRRLKEPVAIHMDHTSAVIDVDYAPTGREFVAGSYDKTIRIFQNDKGH 190
A+ D + +DV R + + H V + ++P GR +GS+DK + I+ G+
Sbjct: 309 ASYDTTVRLWDVER-GGCLQVLSKHHEPVYTISFSPDGRYLASGSFDKRVHIWSTQTGN 366
>SB_37875| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 544
Score = 31.1 bits (67), Expect = 0.75
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +2
Query: 86 HTSAVIDVDYAPTGREFVAGSYDKTIRIF 172
HTS V+D+D++ G+ + S D+T+R++
Sbjct: 100 HTSEVLDLDFSLNGKLLASTSQDRTVRLW 128
>SB_6763| Best HMM Match : WD40 (HMM E-Value=4.6e-24)
Length = 208
Score = 31.1 bits (67), Expect = 0.75
Identities = 16/73 (21%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +2
Query: 53 RLKEPVAIHMDHTSAVIDVDYAPTGREFVAGSYDKTIRIFQNDKGHSRDVYHTKRMQRLT 232
++ EP+ H + + V ++P GR + ++DK+++++ + G + T +
Sbjct: 47 QIAEPLVRMTGHQALINQVCFSPDGRLIASAAFDKSVKLWNGETGK----FITSLRGHVN 102
Query: 233 CV---KWSLDINM 262
CV WS D +
Sbjct: 103 CVYQIAWSADCRL 115
>SB_21573| Best HMM Match : WD40 (HMM E-Value=4.1e-32)
Length = 458
Score = 30.7 bits (66), Expect = 1.00
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 86 HTSAVIDVDYAPTGREFVAGSYDKTIRIFQNDK 184
H S V V ++ GR +GS+D+T +F DK
Sbjct: 32 HNSKVHSVSWSCDGRRLASGSFDRTASVFVLDK 64
>SB_47540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 622
Score = 30.7 bits (66), Expect = 1.00
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +2
Query: 23 DYNLYTFDVRRLKEPVAIHMDHTSAVIDVDYAPTGREFVAGSYDKTIRIFQ 175
D + ++ ++ E + I HT V V + P G+ + S DKT+R+++
Sbjct: 109 DNTVTIWNAQKFPEVIQIIKGHTGLVKGVTWDPVGKYLASQSDDKTLRVWR 159
>SB_40185| Best HMM Match : WD40 (HMM E-Value=0)
Length = 503
Score = 30.7 bits (66), Expect = 1.00
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 86 HTSAVIDVDYAPTGREFVAGSYDKTIRIFQND 181
H V DV + P G F + S+D+T R++ D
Sbjct: 124 HNYPVWDVQFCPRGHYFASTSHDRTARLWSTD 155
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +2
Query: 59 KEPVAIHMDHTSAVIDVDYAPTGREFVAGSYDKTIRIFQNDKGHS 193
++P+ I H S V V + P GS D+T+R++ G S
Sbjct: 157 QQPLRIFAGHVSDVNKVAFHPNCNYIATGSSDRTVRLWDIQTGSS 201
>SB_26977| Best HMM Match : WD40 (HMM E-Value=1.9e-10)
Length = 345
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 29 NLYTFDVRRLKEPVAIHMDHTSAVIDVDYAPTGREFVAGSYDKTIRI 169
NL TF V RL A++ H + + + +P G GS+D T+R+
Sbjct: 287 NLPTFQVERL----AVYYGHDNRISCLKVSPDGTGICTGSWDNTLRM 329
>SB_33706| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 969
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +1
Query: 457 KELRTIREKTKRKEANRPPTVKRGQYQLCLRKRDMSLKKTNDCVNVN 597
+EL+ ++EKTKR++A + +++ GQ++ L + L D +N
Sbjct: 582 EELKELQEKTKREQAKKYFSLREGQFESALEECKKILHPEKDGKIIN 628
>SB_42943| Best HMM Match : WD40 (HMM E-Value=0)
Length = 273
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +2
Query: 86 HTSAVIDVDYAPTGREFVAGSYDKTIRIFQNDKGHS--RDVYHTK 214
H V DV + G+ ++GS+DKT+R++ + G + R V HTK
Sbjct: 99 HNHFVSDVVMSSDGQFALSGSWDKTLRLWDLNAGVTTRRFVGHTK 143
>SB_17662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +2
Query: 77 HMDHTSAVIDVDYAPTGREFVAGSYDKTIRI---FQNDKGHS 193
++ HT +V V + P ++++ S+DKT+RI F+N + S
Sbjct: 132 NVGHTDSVRCVMHIPERSQYISASWDKTVRIWNAFKNSRKRS 173
>SB_34753| Best HMM Match : WD40 (HMM E-Value=5.3e-20)
Length = 645
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/62 (20%), Positives = 29/62 (46%)
Frame = +2
Query: 2 SLQLANEDYNLYTFDVRRLKEPVAIHMDHTSAVIDVDYAPTGREFVAGSYDKTIRIFQND 181
S+ + D + + L++ V + D + D+ ++P G+ GS+D + I+
Sbjct: 200 SIAVGQNDGGFLILEAKTLEKVVG-YKDRKEEISDIKFSPDGKFLAVGSHDNYVDIYTVK 258
Query: 182 KG 187
+G
Sbjct: 259 RG 260
>SB_32324| Best HMM Match : WD40 (HMM E-Value=6.4e-21)
Length = 123
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +2
Query: 86 HTSAVIDVDYAPTGREFVAGSYDKTIRIFQNDKGHS--RDVYHTK 214
H V DV + G+ ++GS+DKT+R++ + G + R V HTK
Sbjct: 62 HNHFVSDVVMSSDGQFALSGSWDKTLRLWDLNAGVTTRRFVGHTK 106
>SB_10949| Best HMM Match : WD40 (HMM E-Value=3.1e-10)
Length = 193
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 128 REFVAGSYDKTIRIFQNDKGHSRDVYHTKRMQRLTCVKWS 247
R +A S+D +RI+ KG++ VY T + ++ V WS
Sbjct: 52 RNVLATSHDGDVRIWDLRKGNTPVVYITAHLSKIHGVDWS 91
>SB_54574| Best HMM Match : WD40 (HMM E-Value=0)
Length = 1050
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +2
Query: 62 EPVAIHMDHTSAVIDVDYAPTGREFVAGSYDKTIRIFQNDKGHSRDVYHTKRMQRLTCVK 241
E V + HT V ++P + V+ S D+T++++ + G VY M V+
Sbjct: 585 EGVLCFVGHTQEVFSCSFSPDDTKAVSCSADRTVKVWDSKTGVCYHVY----MAHTDIVR 640
Query: 242 W 244
W
Sbjct: 641 W 641
>SB_11169| Best HMM Match : WD40 (HMM E-Value=5.5001e-42)
Length = 383
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 223 AINLREMVSRYKYVMSGSDEMNIRMWKARASE 318
A+N+ +Y+ SGSD+ +IR+W +S+
Sbjct: 190 AVNVVAFSLDNRYIFSGSDDKSIRIWSRESSK 221
>SB_39225| Best HMM Match : NIF (HMM E-Value=0)
Length = 1772
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 68 VAIHMDHTSAVIDVDYAPTGREFVAGSYDKTIRIFQNDKGHSRDVY 205
+ + HT +V + + V S+DKTIR++ G+ VY
Sbjct: 32 IKVMRGHTDSVNSCRFCFDDAKIVTASHDKTIRLWDASSGNQLKVY 77
>SB_17672| Best HMM Match : ERM (HMM E-Value=0.13)
Length = 391
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 454 QKELRTIREKTKRKEANRPPTVKRGQ-YQLCLRKRDMSLKKTNDCVN 591
++ELRT+RE+ +R +A +R Q + D+ + TND N
Sbjct: 157 EQELRTVREELERSQAAAHQAQQRPQTATIACSTHDLPSQSTNDSTN 203
>SB_7743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 116
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +1
Query: 445 LNAQKELRTIREKTKRKEANRPPTVKRGQYQLCLRKRDMSLKKTNDCVNVN 597
+N ++ RT+ EKT+ K RP ++G+ + KR T D +N
Sbjct: 1 MNRKRTRRTVTEKTRNKRDARPRQDEQGKNKENSDKRKQGTSVTRDHDKIN 51
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +1
Query: 445 LNAQKELRTIREKTKRKEANRPPTVKRGQYQLCLRKRDMSLKKTNDCVNVN 597
+N + RT+ E+T+ K RP K+G+ + KR T D +N
Sbjct: 50 INRGRTRRTVTEETRNKRDARPRQDKQGKNKENTDKRKQGTSGTRDHDKIN 100
>SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2332
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 74 IHMDHTSAVIDVDYAPTGREFVAGSYDKTIRIFQNDKGHSRDVYHTKR 217
I + H AV + P G ++GS D TIR++ D + HT +
Sbjct: 220 IFIGHLKAVNTLAIYPFGSYIMSGSSDNTIRVWSLDMSDEVNRIHTNQ 267
>SB_48353| Best HMM Match : Erp_C (HMM E-Value=2.6)
Length = 220
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +2
Query: 44 DVRRLKEPVAIHMDHTSAVIDVDYAPTGREFVAGSYDKTIRIFQNDKGHSRDVYHTKRMQ 223
D + L EPV + + S +V +G G Y+K++++ + G RDV +
Sbjct: 147 DNKTLSEPVKLIHLNNSLADNVKIVISGLTGGPGDYEKSVKLLEGRFGDPRDVIEA-HLN 205
Query: 224 RLT 232
R+T
Sbjct: 206 RIT 208
>SB_40766| Best HMM Match : WD40 (HMM E-Value=1.19993e-41)
Length = 1487
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 68 VAIHMDHTSAVIDVDYAPTGREFVAGSYDKTIRIF 172
V H +H+++V V ++P G+ ++ S D T+R F
Sbjct: 1287 VTFH-EHSASVTAVTFSPNGQVVLSASLDGTVRAF 1320
>SB_40159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1497
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +2
Query: 44 DVRRLKEPVAIHMDHTSAVIDVDYAPTGREFVAGSYDKTIRIFQNDKGHSRDVYHTKRMQ 223
D + L EPV + + S +V +G G Y+K++++ + G RDV +
Sbjct: 147 DNKTLSEPVKLVHLNNSLADNVKIVISGLTGGPGDYEKSVKLLEGRFGDPRDVIEA-HLN 205
Query: 224 RLT 232
R+T
Sbjct: 206 RIT 208
>SB_30516| Best HMM Match : GETHR (HMM E-Value=0.9)
Length = 1058
Score = 28.3 bits (60), Expect = 5.3
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Frame = +1
Query: 349 QALNYAEALKEKFATHPQVKRIARHRHVPKHILNAQKELRTIREK------TKRKEANRP 510
+A Y ++K +P KR R+ A++ T R K TKR A R
Sbjct: 546 KAKGYRNTKRKKAKWYPNTKRGKAKRYPNTKRGKAKRYPNTKRGKAKRYPNTKRGRAKRY 605
Query: 511 PTVKRGQYQLCLRKRDMSLKKTN 579
P KRG+ ++ KR + + N
Sbjct: 606 PNTKRGKAEVSYTKRGKAKRYPN 628
>SB_17245| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = -1
Query: 324 KFFRCPGLPHSYIHFVRSTHYIFISRDHFTQVNRCILFVW*TSRECPLSFWNILIVLS*L 145
+FF LP + H + T Y+ ++ H RC+LFV +R PL+ + L
Sbjct: 180 RFFSIRYLPLAVCHSLFGTRYLPLAVCHSLFATRCLLFV---TRYLPLAICHTLFATRYF 236
Query: 144 P 142
P
Sbjct: 237 P 237
>SB_35075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1184
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/68 (23%), Positives = 34/68 (50%)
Frame = +1
Query: 409 RIARHRHVPKHILNAQKELRTIREKTKRKEANRPPTVKRGQYQLCLRKRDMSLKKTNDCV 588
R H+ PK+ L ++T R+KT+R + ++ P + L+ + + L + + V
Sbjct: 624 RSRTHKFTPKNKLKRLSGIKTERQKTERHKYHKKPD-RDKHLDNRLQNQFLRLAQDGNLV 682
Query: 589 NVNVIIKY 612
+ ++KY
Sbjct: 683 ELRRLLKY 690
>SB_30230| Best HMM Match : CH (HMM E-Value=0.0035)
Length = 2440
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 445 LNAQKELRTIREKTKRKEANRPPTVKRGQYQL 540
L ++ L + K + ++ PPT KRG Y L
Sbjct: 2088 LTLEQALENLANKQEASDSASPPTAKRGTYSL 2119
>SB_27661| Best HMM Match : Ubie_methyltran (HMM E-Value=0.58)
Length = 388
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/83 (21%), Positives = 31/83 (37%)
Frame = +1
Query: 205 PYKKNAAINLREMVSRYKYVMSGSDEMNIRMWKARASEKLGVLKPRERQALNYAEALKEK 384
PY NAA + +Y+ M + + + S G P E + +A+K++
Sbjct: 242 PYGSNAARAASPIAEKYQIPMIAVTASSTQTYSRGHSYLFGTFTPNESLTESMVDAIKQQ 301
Query: 385 FATHPQVKRIARHRHVPKHILNA 453
+ + R PK I A
Sbjct: 302 VPDTQSIALLIRDDLFPKSIARA 324
>SB_41443| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 482
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +2
Query: 32 LYTFDVRRLKEPVAIHMDHTSAVIDVDYAPTGREFVAGSYDKTIRIF 172
++ DVR + VA HT V + ++P G+ +G D + I+
Sbjct: 272 IHHHDVRAAEHHVATLDKHTQEVCGLKWSPDGKYLASGGNDNLLNIW 318
>SB_32192| Best HMM Match : Guanylin (HMM E-Value=4.9)
Length = 160
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 454 QKELRTIREKTKRKEANRPPTVKRGQ-YQLCLRKRDMSLKKTNDCVN 591
++ELRT+RE+ +R +A +R Q + D+ + TND N
Sbjct: 49 EQELRTVREELERSQAAAHQAQQRPQTATIACSTGDLPSQSTNDSTN 95
>SB_54594| Best HMM Match : Ank (HMM E-Value=4.4e-11)
Length = 733
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 486 EEKRSKQTAHSKKGTIPIVSEKKRHVVKE 572
+EK K+T K G +P + E +R ++KE
Sbjct: 565 DEKVKKKTTSQKTGKVPKLKESERLLIKE 593
>SB_58364| Best HMM Match : WD40 (HMM E-Value=2.8026e-45)
Length = 426
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +2
Query: 74 IHMDHTSAVIDVDYAPTGREFVAGSYDKTIRIFQNDKGH 190
++ + T+ V + Y+P+G F+AGS D + ++ +G+
Sbjct: 152 LNSEPTNFVNCIGYSPSGDFFIAGSADGKLCLYDGKEGN 190
>SB_57129| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 456
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/77 (22%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +1
Query: 217 NAAINLREMVSRYK--YVMSGSDEMNIRM-WKARASEKLGVLKPRERQALNYAEALKEKF 387
NA +N REM++RY+ Y + + + + + +S++ +P + ++ + ++
Sbjct: 295 NAGLNYREMIARYRKGYRLERPPDCDQGLNQRPDSSDRYVDCQPHRPRRQDHRSTVYQRL 354
Query: 388 ATHPQVKRIARHRHVPK 438
T + K +A+H V K
Sbjct: 355 PTMARSKEVAKHDAVIK 371
>SB_51986| Best HMM Match : HLH (HMM E-Value=0.15)
Length = 2110
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 393 ASTSEAYRSSQTRP*THTECAERTTNYPRENEEKRSKQTAHSKKG 527
A S RS + R +T A+ TN PR N EKR+ + + +K+G
Sbjct: 1821 AHVSTPGRSPKLRTPLNTPLAQYPTNVPRAN-EKRNVEMSITKQG 1864
>SB_43370| Best HMM Match : RhoGAP (HMM E-Value=1.6e-18)
Length = 865
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 424 RHVPKHILNAQKELRTIREKTK-RKEANRPPTVKRGQYQL 540
R +P + +++ LR R +K R A RPP+++ G Y+L
Sbjct: 314 RALPTFPMWSRRHLRKTRTYSKSRDSAPRPPSMRSGSYRL 353
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,703,873
Number of Sequences: 59808
Number of extensions: 422099
Number of successful extensions: 1617
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1602
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1536271375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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