Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40159
(621 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42833-5|AAA83580.1| 444|Caenorhabditis elegans Hypothetical pr... 103 1e-22
AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp (s... 33 0.12
U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical pr... 32 0.29
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 32 0.38
Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical pr... 31 0.66
AL034393-7|CAA22322.2| 337|Caenorhabditis elegans Hypothetical ... 30 1.2
L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell l... 30 1.5
AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein. 30 1.5
Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical p... 29 2.0
Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical pr... 29 2.0
U53340-3|AAA96208.1| 578|Caenorhabditis elegans Hypothetical pr... 29 2.0
AL132948-6|CAC51070.1| 395|Caenorhabditis elegans Hypothetical ... 29 2.7
AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical ... 29 2.7
AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical ... 29 2.7
Z81494-11|CAN99681.1| 455|Caenorhabditis elegans Hypothetical p... 29 3.5
Z81494-7|CAI79161.1| 387|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z81494-6|CAC42275.1| 451|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z71262-6|CAA95815.1| 44|Caenorhabditis elegans Hypothetical pr... 29 3.5
U28941-4|AAM98024.1| 484|Caenorhabditis elegans Temporarily ass... 29 3.5
U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily ass... 29 3.5
U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily ass... 29 3.5
U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily ass... 29 3.5
Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z71262-4|CAA95814.1| 775|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z83122-11|CAB05603.2| 648|Caenorhabditis elegans Hypothetical p... 28 6.2
Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z81073-10|CAB03035.2| 648|Caenorhabditis elegans Hypothetical p... 28 6.2
Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical p... 28 6.2
Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical p... 28 6.2
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 28 6.2
X17497-1|CAA35532.1| 340|Caenorhabditis elegans G-protein protein. 28 6.2
U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical pr... 28 6.2
AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein. 28 6.2
Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z49127-9|CAA88948.1| 340|Caenorhabditis elegans Hypothetical pr... 27 8.2
U42835-5|AAO61444.1| 517|Caenorhabditis elegans Uncoordinated p... 27 8.2
U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated p... 27 8.2
U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical pr... 27 8.2
AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein. 27 8.2
AF291846-1|AAK55963.1| 340|Caenorhabditis elegans heterotrimeri... 27 8.2
AF068708-1|AAC17759.1| 452|Caenorhabditis elegans Hypothetical ... 27 8.2
>U42833-5|AAA83580.1| 444|Caenorhabditis elegans Hypothetical
protein ZK430.7 protein.
Length = 444
Score = 103 bits (246), Expect = 1e-22
Identities = 46/81 (56%), Positives = 61/81 (75%)
Frame = +2
Query: 11 LANEDYNLYTFDVRRLKEPVAIHMDHTSAVIDVDYAPTGREFVAGSYDKTIRIFQNDKGH 190
+A+EDY+LYTFD+R ++ PV H TSAV+DVDY+PTG+EFVA YD++IR+F+
Sbjct: 253 VASEDYSLYTFDMRYMEHPVQSHQGFTSAVLDVDYSPTGQEFVAAGYDRSIRLFKARDMT 312
Query: 191 SRDVYHTKRMQRLTCVKWSLD 253
SRDVY+TKRM + V WS D
Sbjct: 313 SRDVYYTKRMASVLSVLWSAD 333
Score = 102 bits (244), Expect = 2e-22
Identities = 45/84 (53%), Positives = 63/84 (75%)
Frame = +1
Query: 256 KYVMSGSDEMNIRMWKARASEKLGVLKPRERQALNYAEALKEKFATHPQVKRIARHRHVP 435
K+V+SGS+EMNIR+WKA A+EKLG L RE+QA Y E L++ + HP+V+RIA+HR+VP
Sbjct: 335 KFVLSGSNEMNIRVWKANAAEKLGPLTKREKQAFAYNEKLRDTYKNHPEVRRIAKHRNVP 394
Query: 436 KHILNAQKELRTIREKTKRKEANR 507
+HI A KE + IR+ R++ R
Sbjct: 395 RHIFTAAKEHKLIRDARGRRDFRR 418
>AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 17 protein.
Length = 567
Score = 33.5 bits (73), Expect = 0.12
Identities = 17/77 (22%), Positives = 38/77 (49%)
Frame = +2
Query: 23 DYNLYTFDVRRLKEPVAIHMDHTSAVIDVDYAPTGREFVAGSYDKTIRIFQNDKGHSRDV 202
D + ++V + V + H V +V + G EF++ S+D+ ++++ + G +
Sbjct: 297 DTKIKLWEVYDRQRVVRTYAGHKLPVREVAFNNEGTEFLSASFDRYVKLWDTETGQVKQR 356
Query: 203 YHTKRMQRLTCVKWSLD 253
+HT + C+K+ D
Sbjct: 357 FHTGHVP--YCLKYHPD 371
>U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical
protein F13H8.2 protein.
Length = 929
Score = 32.3 bits (70), Expect = 0.29
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +2
Query: 47 VRRLKEPVAIHMDHTSAVIDVDYAPTGREFVAGSYDKTIRIFQNDKGHSRDVYH 208
V LK V+++ H+ V VD AP+ + V GS DK+++++ D G +H
Sbjct: 573 VNTLKFFVSLY-GHSLPVTCVDIAPSSKLCVTGSVDKSVKVWGLDFGDCHKSFH 625
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 62 EPVAIHMDHTSAVIDVDYAPTGREFVAGSYDKTIRIF 172
E V HT A+ + +P F+ S DKT+R +
Sbjct: 484 ELVETRKAHTGAIWTIQNSPDNEGFITASADKTVRFW 520
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 31.9 bits (69), Expect = 0.38
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +2
Query: 41 FDVRRLKEPVAIHMDHTSAVIDVDYAPTGREFVAGSYDKTIRIFQNDKGHSRDVYHTKRM 220
F VR + A H VI ++P GR +GS D+T+RI+ + HT +
Sbjct: 89 FRVRPVTRCSASIPGHGEPVISAQFSPDGRGLASGSGDQTMRIWDIE---LELPLHTCKS 145
Query: 221 QR--LTCVKWSLD 253
+ + C+ WS D
Sbjct: 146 HKSWVLCIAWSPD 158
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 86 HTSAVIDVDYAPTGREFVAGSYDKTIRIFQ 175
H V VD++P G + V+G DK +++++
Sbjct: 443 HGDEVFTVDWSPEGTKVVSGGKDKVLKLWR 472
>Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical
protein K04D7.1 protein.
Length = 325
Score = 31.1 bits (67), Expect = 0.66
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +2
Query: 65 PVAIHMDHTSAVIDVDYAPTGREFVAGSYDKTIRIFQNDKGHS--RDVYHTK 214
PV H V DV + G+ ++GS+DKT+R++ ++G S + + HTK
Sbjct: 61 PVRSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTK 112
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 80 MDHTSAVIDVDYAPTGREFVAGSYDKTIRIF 172
+ HT V+ V ++ R+ V+GS DK+I+++
Sbjct: 108 ISHTKDVLSVAFSADNRQIVSGSRDKSIKLW 138
>AL034393-7|CAA22322.2| 337|Caenorhabditis elegans Hypothetical
protein Y18D10A.9 protein.
Length = 337
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +2
Query: 53 RLKEPVAIHMDHTSAVIDVDYAPTGREFVAGSYDKTIRIFQNDKGHSRDV 202
RL+ + HT AV V ++ G+ V+ S+D ++ ++Q + G +V
Sbjct: 55 RLECRTTLDDSHTRAVRSVAFSNDGKCLVSASFDASVVVYQQEDGEFAEV 104
>L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell
lineage protein 36 protein.
Length = 962
Score = 29.9 bits (64), Expect = 1.5
Identities = 24/120 (20%), Positives = 46/120 (38%), Gaps = 2/120 (1%)
Frame = +1
Query: 154 QNYQNIPE*QRTLPRCLPYKKNAAINLREMVSRYKYVMSGSDEMNIRMWKARASEK--LG 327
+ + PE P P + L+E ++ ++ + R+ A+ +K
Sbjct: 537 EEHDPTPESVEREPTVSPNDPRERLRLKERDEQFAKMVQKRSQQVKRLINAKQFKKQEAA 596
Query: 328 VLKPRERQALNYAEALKEKFATHPQVKRIARHRHVPKHILNAQKELRTIREKTKRKEANR 507
KPR+ A N A+ + +T P+ K + P+ + + R R KTK +
Sbjct: 597 TKKPRKALAYNLAKGIAATSSTEPEDK-VTSSEQTPEPTTSQKFIARNTRSKTKESAVQK 655
>AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein.
Length = 962
Score = 29.9 bits (64), Expect = 1.5
Identities = 24/120 (20%), Positives = 46/120 (38%), Gaps = 2/120 (1%)
Frame = +1
Query: 154 QNYQNIPE*QRTLPRCLPYKKNAAINLREMVSRYKYVMSGSDEMNIRMWKARASEK--LG 327
+ + PE P P + L+E ++ ++ + R+ A+ +K
Sbjct: 537 EEHDPTPESVEREPTVSPNDPRERLRLKERDEQFAKMVQKRSQQVKRLINAKQFKKQEAA 596
Query: 328 VLKPRERQALNYAEALKEKFATHPQVKRIARHRHVPKHILNAQKELRTIREKTKRKEANR 507
KPR+ A N A+ + +T P+ K + P+ + + R R KTK +
Sbjct: 597 TKKPRKALAYNLAKGIAATSSTEPEDK-VTSSEQTPEPTTSQKFIARNTRSKTKESAVQK 655
>Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +2
Query: 53 RLKEPVAIHMDHTSAVIDVDYAPTGREFVAGSYDKTIRIFQNDKGHSRD--VYHTKRMQR 226
R K V HT+ V DV + + S+D T+R++ G S +H K ++
Sbjct: 298 RTKAQVHCFAGHTNTVADVVCQSVDPQVITASHDATVRLWDLAAGRSMCTLTHHKKSVRA 357
Query: 227 LT 232
LT
Sbjct: 358 LT 359
>Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +2
Query: 53 RLKEPVAIHMDHTSAVIDVDYAPTGREFVAGSYDKTIRIFQNDKGHSRD--VYHTKRMQR 226
R K V HT+ V DV + + S+D T+R++ G S +H K ++
Sbjct: 298 RTKAQVHCFAGHTNTVADVVCQSVDPQVITASHDATVRLWDLAAGRSMCTLTHHKKSVRA 357
Query: 227 LT 232
LT
Sbjct: 358 LT 359
>U53340-3|AAA96208.1| 578|Caenorhabditis elegans Hypothetical
protein F02E8.5 protein.
Length = 578
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +2
Query: 92 SAVIDVDYAPTGREFVAGSYDKTIRIFQNDKGHSRDVYHTKRMQRLTCVKW 244
+A +DY + F+A S DK +RI+ D + ++TCVK+
Sbjct: 337 AAFTRIDYERDRKHFIASSNDKNVRIWNLDNSRLLSTL-SGHSDQVTCVKF 386
>AL132948-6|CAC51070.1| 395|Caenorhabditis elegans Hypothetical
protein Y39B6A.7 protein.
Length = 395
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 87 IHLP*LMLTMRQLAVNLSRVVMTKLSEYSRMTKDTPEMFTIQKECS 224
+ LP L L R++ L+ ++ K ++ +T DT E+F + CS
Sbjct: 305 VSLPNLQLAERKIFQKLNNLLRRKAKQHGWVTVDTTEIFRTRGICS 350
>AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical
protein C05D2.10b protein.
Length = 486
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 44 DVRRLKEPVAIHMDHTSAVIDVDYAPTGREFVAGSYDKTIRIFQNDKG 187
D R++ PV H + V ++ G++ V S+D+T ++ +KG
Sbjct: 265 DGHRIRVPVMRLTGHRAPVSCCEWLAGGQQMVTASWDRTANVWDVEKG 312
>AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical
protein C05D2.10a protein.
Length = 484
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 44 DVRRLKEPVAIHMDHTSAVIDVDYAPTGREFVAGSYDKTIRIFQNDKG 187
D R++ PV H + V ++ G++ V S+D+T ++ +KG
Sbjct: 263 DGHRIRVPVMRLTGHRAPVSCCEWLAGGQQMVTASWDRTANVWDVEKG 310
>Z81494-11|CAN99681.1| 455|Caenorhabditis elegans Hypothetical
protein F02E9.10c protein.
Length = 455
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 68 VAIHMDHTSAVIDVDYAPTGREFVAGSYDKTIRIFQ 175
++I +HTS + + ++PT R ++G D I I++
Sbjct: 290 MSITNEHTSTISALSFSPTSRHLLSGGDDAMILIYR 325
>Z81494-7|CAI79161.1| 387|Caenorhabditis elegans Hypothetical
protein F02E9.10b protein.
Length = 387
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 68 VAIHMDHTSAVIDVDYAPTGREFVAGSYDKTIRIFQ 175
++I +HTS + + ++PT R ++G D I I++
Sbjct: 226 MSITNEHTSTISALSFSPTSRHLLSGGDDAMILIYR 261
>Z81494-6|CAC42275.1| 451|Caenorhabditis elegans Hypothetical
protein F02E9.10a protein.
Length = 451
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 68 VAIHMDHTSAVIDVDYAPTGREFVAGSYDKTIRIFQ 175
++I +HTS + + ++PT R ++G D I I++
Sbjct: 290 MSITNEHTSTISALSFSPTSRHLLSGGDDAMILIYR 325
>Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical
protein K04G11.4 protein.
Length = 395
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 86 HTSAVIDVDYAPTGREFVAGSYDKTIRIFQNDKGHS 193
HT+ V + P+G +GS+D+TIRI+ G++
Sbjct: 189 HTNYVFCCCFNPSGTLIASGSFDETIRIWCARNGNT 224
>Z71262-6|CAA95815.1| 44|Caenorhabditis elegans Hypothetical
protein F22D6.7 protein.
Length = 44
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 382 KFATHPQVKRIARHRHVP 435
KFA PQ RI+RH H+P
Sbjct: 27 KFAISPQFLRISRHPHIP 44
>U28941-4|AAM98024.1| 484|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform c protein.
Length = 484
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 131 HGQLAHSQHQSRQMYDPCEWPLVLLISLH 45
H QLAH Q Q + ++ P + P L I H
Sbjct: 272 HAQLAHQQLQQQGVFQPIQQPSPLQIQTH 300
>U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform d protein.
Length = 799
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 131 HGQLAHSQHQSRQMYDPCEWPLVLLISLH 45
H QLAH Q Q + ++ P + P L I H
Sbjct: 272 HAQLAHQQLQQQGVFQPIQQPSPLQIQTH 300
>U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform a protein.
Length = 1091
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 131 HGQLAHSQHQSRQMYDPCEWPLVLLISLH 45
H QLAH Q Q + ++ P + P L I H
Sbjct: 272 HAQLAHQQLQQQGVFQPIQQPSPLQIQTH 300
>U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform b protein.
Length = 1107
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 131 HGQLAHSQHQSRQMYDPCEWPLVLLISLH 45
H QLAH Q Q + ++ P + P L I H
Sbjct: 272 HAQLAHQQLQQQGVFQPIQQPSPLQIQTH 300
>Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical
protein C36B1.5 protein.
Length = 496
Score = 28.3 bits (60), Expect = 4.7
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +2
Query: 86 HTSAVIDVDYAPTGREFVAGSYDKTIRIF 172
HT + V++ P G E + GS D +++++
Sbjct: 379 HTKEIHSVEWMPNGYEMITGSSDNSMKVW 407
>Z71262-4|CAA95814.1| 775|Caenorhabditis elegans Hypothetical
protein F22D6.5 protein.
Length = 775
Score = 28.3 bits (60), Expect = 4.7
Identities = 26/88 (29%), Positives = 41/88 (46%)
Frame = +1
Query: 310 ASEKLGVLKPRERQALNYAEALKEKFATHPQVKRIARHRHVPKHILNAQKELRTIREKTK 489
+ EK + +RQ + + K+K H + K+ H+ KH +KE + REK
Sbjct: 20 SDEKASDSEVEKRQRTDSERSGKDKKKKHKKEKK---HKKDKKH----KKEKKHKREKEV 72
Query: 490 RKEANRPPTVKRGQYQLCLRKRDMSLKK 573
E + PP KR ++ K+D S KK
Sbjct: 73 EMENDGPPAKKRTLEEVD-TKKDESKKK 99
>Z83122-11|CAB05603.2| 648|Caenorhabditis elegans Hypothetical
protein F30F8.8 protein.
Length = 648
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/42 (23%), Positives = 23/42 (54%)
Frame = +2
Query: 86 HTSAVIDVDYAPTGREFVAGSYDKTIRIFQNDKGHSRDVYHT 211
H V V+++P R ++ + D+T+R++ + + +Y T
Sbjct: 393 HGGPVFSVNFSPDRRLLISSAGDRTVRLWSMETQRNAVIYRT 434
>Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical
protein CC4.3 protein.
Length = 510
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 86 HTSAVIDVDYAPTGREFVAGSYDKTIRIFQNDKG 187
H+S + DV Y+ G ++ S D +IR++ G
Sbjct: 348 HSSYITDVRYSDEGNHIISCSTDGSIRVWHGKSG 381
>Z81073-10|CAB03035.2| 648|Caenorhabditis elegans Hypothetical
protein F30F8.8 protein.
Length = 648
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/42 (23%), Positives = 23/42 (54%)
Frame = +2
Query: 86 HTSAVIDVDYAPTGREFVAGSYDKTIRIFQNDKGHSRDVYHT 211
H V V+++P R ++ + D+T+R++ + + +Y T
Sbjct: 393 HGGPVFSVNFSPDRRLLISSAGDRTVRLWSMETQRNAVIYRT 434
>Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 38 TFDVRRLKEPVAIHMDHTSAVIDVDYAPTGREFVAGSYDKTIRIFQNDKG 187
++D R L E + HT A+ V Y + V+ S D T+R+++ G
Sbjct: 452 SYDPRVLTETLT---GHTDAIWSVAYHSSNSRLVSASSDSTVRLWEPGNG 498
>Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 38 TFDVRRLKEPVAIHMDHTSAVIDVDYAPTGREFVAGSYDKTIRIFQNDKG 187
++D R L E + HT A+ V Y + V+ S D T+R+++ G
Sbjct: 452 SYDPRVLTETLT---GHTDAIWSVAYHSSNSRLVSASSDSTVRLWEPGNG 498
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 86 HTSAVIDVDYAPTGREFVAGSYDKTIRIFQND 181
HT ++ ++P G+ S DKT++I+ D
Sbjct: 86 HTKSISSAKFSPCGKYLGTSSADKTVKIWNMD 117
>X17497-1|CAA35532.1| 340|Caenorhabditis elegans G-protein protein.
Length = 340
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 86 HTSAVIDVDYAPTGREFVAGSYDKTIRIF 172
H S + V + P+G F GS D T R+F
Sbjct: 225 HESDINAVAFFPSGNRFATGSDDATCRLF 253
>U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical
protein F55F8.3 protein.
Length = 910
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +2
Query: 14 ANEDYNLY--TFDVRRLKEPVAIHMDHTSAVIDVDYAPTGREFVAGSYDKTIRIF 172
A E +N+Y +F+ L + I H SA+ +D G V+GS+D+TI+++
Sbjct: 464 AKEVFNIYIWSFETGHLLD---ILSGHESAISSIDIH--GNHIVSGSWDRTIKMW 513
>AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein.
Length = 510
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 86 HTSAVIDVDYAPTGREFVAGSYDKTIRIFQNDKG 187
H+S + DV Y+ G ++ S D +IR++ G
Sbjct: 348 HSSYITDVRYSDEGNHIISCSTDGSIRVWHGKSG 381
>Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical
protein F28C6.3 protein.
Length = 430
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 83 DHTSAVIDVDYAPTGREFVAGSYDKTIRIFQNDK 184
DH V V + P ++GS DKT+++F K
Sbjct: 168 DHVDDVNTVIFHPRDSILISGSNDKTVKLFDFSK 201
>Z49127-9|CAA88948.1| 340|Caenorhabditis elegans Hypothetical
protein F13D12.7 protein.
Length = 340
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 86 HTSAVIDVDYAPTGREFVAGSYDKTIRIF 172
H S + V + P+G F GS D T R+F
Sbjct: 225 HESDINAVAFFPSGNAFATGSDDATCRLF 253
>U42835-5|AAO61444.1| 517|Caenorhabditis elegans Uncoordinated
protein 78, isoform b protein.
Length = 517
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 86 HTSAVIDVDYAPTGREFVAGSYDKTIRIF 172
H+ +V + ++P G + + S DKTI+I+
Sbjct: 238 HSGSVFGLTWSPDGTKIASASADKTIKIW 266
>U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated
protein 78, isoform a protein.
Length = 611
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 86 HTSAVIDVDYAPTGREFVAGSYDKTIRIF 172
H+ +V + ++P G + + S DKTI+I+
Sbjct: 238 HSGSVFGLTWSPDGTKIASASADKTIKIW 266
>U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical
protein T10F2.4 protein.
Length = 492
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 47 VRRLKEPVAIHMDHTSAVIDVDYAPTGREFVAGSYDKTIRIF 172
V+ E V++ DH+ V V + R V S DK++R+F
Sbjct: 450 VKSWSEVVSLS-DHSGPVTGVRFGENARSLVTCSLDKSLRVF 490
>AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein.
Length = 611
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 86 HTSAVIDVDYAPTGREFVAGSYDKTIRIF 172
H+ +V + ++P G + + S DKTI+I+
Sbjct: 238 HSGSVFGLTWSPDGTKIASASADKTIKIW 266
>AF291846-1|AAK55963.1| 340|Caenorhabditis elegans heterotrimeric G
protein beta subunit1 protein.
Length = 340
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 86 HTSAVIDVDYAPTGREFVAGSYDKTIRIF 172
H S + V + P+G F GS D T R+F
Sbjct: 225 HESDINAVAFFPSGNAFATGSDDATCRLF 253
>AF068708-1|AAC17759.1| 452|Caenorhabditis elegans Hypothetical
protein C18G1.7 protein.
Length = 452
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = -1
Query: 318 FRCPGLPHSYIHFVRSTHYIFISRDHFTQVNRCILFVW*TSRECPLSFWNI 166
+R G H ++F ST + + DH+ ++ + W T P F NI
Sbjct: 176 WRNQGASHFIVYFHSSTKEVKMVLDHYQKLGILTIMPWPTFGTLPTQFPNI 226
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,616,403
Number of Sequences: 27780
Number of extensions: 320245
Number of successful extensions: 1305
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1302
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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