Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40157
(683 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q15008 Cluster: 26S proteasome non-ATPase regulatory su... 75 1e-12
UniRef50_UPI0000DB75D3 Cluster: PREDICTED: similar to 26S protea... 69 1e-10
UniRef50_Q20585 Cluster: 26S proteasome non-ATPase regulatory su... 47 4e-04
UniRef50_Q55C75 Cluster: 26S proteasome non-ATPase regulatory su... 47 5e-04
UniRef50_Q4XM73 Cluster: 26S proteasome regulatory complex subun... 45 0.002
UniRef50_Q4Q4Z3 Cluster: Proteasome regulatory non-ATP-ase subun... 42 0.011
UniRef50_Q06103 Cluster: 26S proteasome regulatory subunit RPN7;... 42 0.011
UniRef50_Q6CG80 Cluster: Similarity; n=3; Yarrowia lipolytica|Re... 39 0.099
UniRef50_Q10335 Cluster: Probable 26S proteasome regulatory subu... 39 0.13
UniRef50_A2E0T9 Cluster: PCI domain containing protein; n=1; Tri... 38 0.30
UniRef50_A6RV17 Cluster: Proteasome regulatory particle, non-ATP... 37 0.40
UniRef50_UPI0000E46D9E Cluster: PREDICTED: similar to Viral A-ty... 37 0.53
UniRef50_Q4P5P9 Cluster: Putative uncharacterized protein; n=2; ... 36 0.92
UniRef50_UPI000038D597 Cluster: COG2319: FOG: WD40 repeat; n=2; ... 36 1.2
UniRef50_Q500K0 Cluster: Putative uncharacterized protein; n=1; ... 34 3.7
UniRef50_Q033Z6 Cluster: ABC-type sugar transport system, peripl... 34 3.7
UniRef50_A1DMH6 Cluster: Proteasome regulatory particle subunit ... 34 3.7
UniRef50_Q6CQJ8 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 33 4.9
UniRef50_P06738 Cluster: Glycogen phosphorylase; n=17; Ascomycot... 33 4.9
UniRef50_Q9KC56 Cluster: BH1718 protein; n=23; Bacillaceae|Rep: ... 33 8.6
UniRef50_O59795 Cluster: CASP family protein; n=1; Schizosacchar... 33 8.6
>UniRef50_Q15008 Cluster: 26S proteasome non-ATPase regulatory
subunit 6; n=70; Eukaryota|Rep: 26S proteasome
non-ATPase regulatory subunit 6 - Homo sapiens (Human)
Length = 389
Score = 75.4 bits (177), Expect = 1e-12
Identities = 49/162 (30%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Frame = +1
Query: 235 SVKGAVMNGIKAGHMAPYYKEVCNDLGWAFDQKLYDDMTKENQDRLSKFEE--DDSETPV 408
+V+ +M ++ +MAPYY+ +C L W D L + M K N+D L + +E +D+E +
Sbjct: 36 AVRDELMAAVRDNNMAPYYEALCKSLDWQIDVDLLNKMKKANEDELKRLDEELEDAEKNL 95
Query: 409 WQDRL--------DYLCSVGDKETATALATSKYEDSTLTTNR-GSMLYLLCLELL-ISMD 558
+ + +YLC +GDKE A Y+ + +R + YLL + L + D
Sbjct: 96 GESEIRDAMMAKAEYLCRIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDND 155
Query: 559 VM*RNGKSYQ*GSRVSR-*RWRLAFRNKLKAYEAIYCLAVRD 681
++ RN + + S + W RN+LK Y+ +YC+A+RD
Sbjct: 156 LITRNTEKAK--SLIEEGGDWDR--RNRLKVYQGLYCVAIRD 193
>UniRef50_UPI0000DB75D3 Cluster: PREDICTED: similar to 26S
proteasome non-ATPase regulatory subunit 6 (26S
proteasome regulatory subunit S10) (p42A) (Proteasome
regulatory particle subunit p44S10) (Phosphonoformate
immuno-associated protein 4) (Breast cancer-associated
protein SGA-113M)...; n=1; Apis mellifera|Rep:
PREDICTED: similar to 26S proteasome non-ATPase
regulatory subunit 6 (26S proteasome regulatory subunit
S10) (p42A) (Proteasome regulatory particle subunit
p44S10) (Phosphonoformate immuno-associated protein 4)
(Breast cancer-associated protein SGA-113M)... - Apis
mellifera
Length = 400
Score = 68.9 bits (161), Expect = 1e-10
Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 12/160 (7%)
Frame = +1
Query: 235 SVKGAVMNGIKAGHMAPYYKEVCNDLGWAFDQKLYDDMTKENQDRLSKFEE------DDS 396
++K ++ IK G+M YY++VC + W D+ L + M +N+ ++ E +D+
Sbjct: 33 NLKTEFLDTIKRGNMTRYYEDVCKEFNWKIDEDLINAMKHKNEVTWNELEFSDNSTLEDT 92
Query: 397 ETPVWQDRLDYLCSVGDKETATALATSKYED----STLTTNRGSMLYLLCL--ELLISMD 558
E W+ + ++ C +GD + AT +ATS +D S++ L+ + + SM
Sbjct: 93 EKKNWRKKFEFFCEIGDLDRATNIATSILKDENNSSSIRIEAAFGLFRIAYIRNNIRSMG 152
Query: 559 VM*RNGKSYQ*GSRVSR*RWRLAFRNKLKAYEAIYCLAVR 678
+ G S W RNKLK YEA+Y LA R
Sbjct: 153 KIIAEITDLMEGCHASGSNW--CCRNKLKVYEAVYYLATR 190
>UniRef50_Q20585 Cluster: 26S proteasome non-ATPase regulatory
subunit 6; n=2; Caenorhabditis|Rep: 26S proteasome
non-ATPase regulatory subunit 6 - Caenorhabditis elegans
Length = 410
Score = 47.2 bits (107), Expect = 4e-04
Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 10/150 (6%)
Frame = +1
Query: 262 IKAGHMAPYYKEVCNDLGWAFDQKLYDDMTKENQDRLSKF--EEDDSETPVWQD------ 417
IK MAP+Y+ VC D D M NQ ++ + E +D+E + +
Sbjct: 59 IKEFDMAPFYELVCADFKIVVDATQLAAMKAANQKKIDEITAEVEDAEKNLGESEVRQGL 118
Query: 418 --RLDYLCSVGDKETATALATSKYEDSTLTTNRGSMLYLLCLELLISMDVM*RNGKSYQ* 591
+ +Y C +GDK+ A T+ YE + R +++ + L +D N K
Sbjct: 119 LRKFEYYCQIGDKDNALKAYTATYEKTVGMGYRIDVVFAMIRVGLFFLDHHLIN-KFITK 177
Query: 592 GSRVSR*RWRLAFRNKLKAYEAIYCLAVRD 681
+ +N+L++YEA+Y ++VRD
Sbjct: 178 AKELMEQGGDWERKNRLRSYEALYRMSVRD 207
>UniRef50_Q55C75 Cluster: 26S proteasome non-ATPase regulatory
subunit 6; n=1; Dictyostelium discoideum AX4|Rep: 26S
proteasome non-ATPase regulatory subunit 6 -
Dictyostelium discoideum AX4
Length = 382
Score = 46.8 bits (106), Expect = 5e-04
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Frame = +1
Query: 262 IKAGHMAPYYKEVCNDLGWAFDQKLYDDMTKENQDRLSKFE-------EDDSETPVWQDR 420
I+ M P YK + L W DQ L + EN+ L + E+ E+ + +
Sbjct: 38 IETHKMLPLYKILVEQLKWTEDQGLVSKLKAENESELKALDNKITDSVENFGESEIREAY 97
Query: 421 L---DYLCSVGDKETATALATSKYEDSTLTTNRGSMLYLLCLELLISM--DVM*RNGKSY 585
L D+ C +GDK+TA + +E + + +++ L + M D++ RN +
Sbjct: 98 LAKSDFYCRIGDKDTAVEMYRQTFEKTVPLGQKLDIVFTLIRMGIFWMDHDIVTRNLEKA 157
Query: 586 Q*GSRVSR-*RWRLAFRNKLKAYEAIYCLAVR 678
Q S V W +N+LK YEA+Y +++R
Sbjct: 158 Q--SLVEEGGDWDR--KNRLKTYEAVYKMSIR 185
>UniRef50_Q4XM73 Cluster: 26S proteasome regulatory complex subunit,
putative; n=7; Plasmodium|Rep: 26S proteasome regulatory
complex subunit, putative - Plasmodium chabaudi
Length = 410
Score = 45.2 bits (102), Expect = 0.002
Identities = 38/156 (24%), Positives = 71/156 (45%), Gaps = 13/156 (8%)
Frame = +1
Query: 250 VMNGIKAGHMAPYYKEVCNDLGWAFDQKLYDDMTKENQDRLSKFE---EDDSETPVWQD- 417
++ IK +M PYY VC +L DQ+LY+ + ++ + + + E ++ SE + D
Sbjct: 45 LLEEIKKNNMYPYYSYVCGELNLDMDQELYNTLKQKADEEIKEIENKIQEASENFDYVDT 104
Query: 418 ------RLDYLCSVGDKETATALATSKYEDSTLTTNRGSMLYLLCLELLISMDVM*RNGK 579
+ ++ C +GDKE + + YE + +L + + D+ + K
Sbjct: 105 KNDILLKANFYCKIGDKENSFKEYEAVYEKGIGIGVKLDILLTIIRISIFFNDI--NSTK 162
Query: 580 SYQ*GSRVSR*R---WRLAFRNKLKAYEAIYCLAVR 678
Y +R + W +NKLK YEA+ + +R
Sbjct: 163 KYLEKARAQMEKGGDWER--KNKLKIYEALNYIMIR 196
>UniRef50_Q4Q4Z3 Cluster: Proteasome regulatory non-ATP-ase subunit,
putative; n=7; Trypanosomatidae|Rep: Proteasome
regulatory non-ATP-ase subunit, putative - Leishmania
major
Length = 408
Score = 42.3 bits (95), Expect = 0.011
Identities = 41/160 (25%), Positives = 65/160 (40%), Gaps = 11/160 (6%)
Frame = +1
Query: 235 SVKGAVMNGIKAGHMAPYYKEVCNDLGWAFDQKLYDDMTKENQDRLSKFEE--------- 387
+ K A+M ++ +MAPY + VC LG D+ +M N +++ F+
Sbjct: 58 TAKAAMMEEMEKHNMAPYIRLVCEALGVPLDESKLAEMDAINAKKVAAFDARLKDAVDNL 117
Query: 388 -DDSETPVWQDRLDYLCSVGDKETATALATSKYEDSTLTTNRGSMLYLLCLELLISMDVM 564
D V Q + D+ +GD E + TL T LY + L I+
Sbjct: 118 GDTEVRDVLQAKCDHYARIGDLEMCMK-TNEECAAKTLATGPKLDLYFQRIRLGIAFSDN 176
Query: 565 *RNGKSYQ*GSRVSR-*RWRLAFRNKLKAYEAIYCLAVRD 681
K R+ + W RN+L+ YE IY + +RD
Sbjct: 177 DIAAKGITDAHRLMKDGDWER--RNRLRVYEGIYHVFIRD 214
>UniRef50_Q06103 Cluster: 26S proteasome regulatory subunit RPN7;
n=11; Saccharomycetales|Rep: 26S proteasome regulatory
subunit RPN7 - Saccharomyces cerevisiae (Baker's yeast)
Length = 429
Score = 42.3 bits (95), Expect = 0.011
Identities = 46/176 (26%), Positives = 74/176 (42%), Gaps = 32/176 (18%)
Frame = +1
Query: 250 VMNGIKAGHMAPYYKEVC---------NDLG----------WA-FDQKLYDDMTKENQ-- 363
V+ IK MAPYYK +C +DL W FDQ+LY+++ K+N+
Sbjct: 50 VLAKIKEEEMAPYYKYLCEEYLVNNGQSDLEHDEKSDSLNEWIKFDQELYNELCKKNESK 109
Query: 364 -----DRLSKFEEDD----SETPVWQDRLDYLCSVGDKETATALATSKYEDSTLTTNRGS 516
+++ K EEDD + W + +Y +GDK+ A + T +
Sbjct: 110 IKELNEKIQKLEEDDEGELEQAQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKID 169
Query: 517 MLYLLCLELLISMDVM*RNGKSYQ*GSRVSR-*RWRLAFRNKLKAYEAIYCLAVRD 681
++ + D + K S + + W RN+ K Y I+CLAVR+
Sbjct: 170 VMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWER--RNRYKTYYGIHCLAVRN 223
>UniRef50_Q6CG80 Cluster: Similarity; n=3; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 390
Score = 39.1 bits (87), Expect = 0.099
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +1
Query: 253 MNGIKAGHMAPYYKEVCNDLGWAFDQKLYDDMT---KENQDRLSKFEEDDSETPVWQDRL 423
+ G K+ ++ P + E N LGW + + D + KEN D +F +D++ +W +R
Sbjct: 272 VTGWKSLYVNPIFTESINGLGWDESRSILDFLNQNLKENHDIHVRFRWNDNDVAIWDNRS 331
Query: 424 DYLCSVGDKETATAL 468
Y + D T L
Sbjct: 332 TYHTATYDYSTTDRL 346
>UniRef50_Q10335 Cluster: Probable 26S proteasome regulatory subunit
rpn7; n=1; Schizosaccharomyces pombe|Rep: Probable 26S
proteasome regulatory subunit rpn7 - Schizosaccharomyces
pombe (Fission yeast)
Length = 409
Score = 38.7 bits (86), Expect = 0.13
Identities = 36/158 (22%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Frame = +1
Query: 250 VMNGIKAGHMAPYYKEVCNDLGWA----FDQKLYDDMTKENQDRLSKFE---EDDSET-- 402
+ + I+ +AP YK + + + FD + M K+N+++L++F+ ED E
Sbjct: 48 LFSAIRDHDLAPLYKYLSENPKTSASIDFDSNFLNSMIKKNEEKLAEFDKAIEDAQELNG 107
Query: 403 -----PVWQDRLDYLCSVGDKETATALATSKYEDSTLTTNRGSMLYLLCLELLISMDVM* 567
+++ DY ++ D+E L +E +TLT + +L+ + D M
Sbjct: 108 EHEILEAMKNKADYYTNICDRERGVQLCDETFERATLTGMKIDVLFSKIRLAYVYAD-MR 166
Query: 568 RNGKSYQ*GSRVSR*RWRLAFRNKLKAYEAIYCLAVRD 681
G+ + + +N+LKAY+ IY +++R+
Sbjct: 167 VVGQLLEKLKPLIEKGGDWERKNRLKAYQGIYLMSIRN 204
>UniRef50_A2E0T9 Cluster: PCI domain containing protein; n=1;
Trichomonas vaginalis G3|Rep: PCI domain containing
protein - Trichomonas vaginalis G3
Length = 378
Score = 37.5 bits (83), Expect = 0.30
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1
Query: 247 AVMNGIKAGHMAPYYKEVCNDLGWAFDQKLYDDMTKENQDRLSKFE 384
++M+ IK +M P+YK + + GW D + T NQ SK E
Sbjct: 33 SLMSEIKKNNMLPFYKSLAAEYGWTVDNDFVNAATAANQAEQSKLE 78
>UniRef50_A6RV17 Cluster: Proteasome regulatory particle,
non-ATPase-like; n=3; Pezizomycotina|Rep: Proteasome
regulatory particle, non-ATPase-like - Botryotinia
fuckeliana B05.10
Length = 489
Score = 37.1 bits (82), Expect = 0.40
Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 11/135 (8%)
Frame = +1
Query: 307 DLGWAFDQKLYDDMTKENQDRLSKFEEDDSE-------TPVWQ---DRLDYLCSVGDKET 456
DL W D+ LY +T+EN+ L F++++ E T V R ++ VGDK+
Sbjct: 97 DLPW--DEALYQKLTEENEVELEGFKKEEEEAAEKAGDTEVQAARGKRAEFWARVGDKDR 154
Query: 457 ATALATSKYEDS-TLTTNRGSMLYLLCLELLISMDVM*RNGKSYQ*GSRVSR*RWRLAFR 633
A A +E + L T +L ++ + L ++ + S W R
Sbjct: 155 AIAAYEEVFEKTGVLGTKIDLVLAIIRMGLFYGDKLLVKKHVDRAKALVESGGDWDR--R 212
Query: 634 NKLKAYEAIYCLAVR 678
N+LKAY +Y L VR
Sbjct: 213 NRLKAYTGLYLLTVR 227
>UniRef50_UPI0000E46D9E Cluster: PREDICTED: similar to Viral A-type
inclusion protein repeat; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to Viral A-type
inclusion protein repeat - Strongylocentrotus purpuratus
Length = 1651
Score = 36.7 bits (81), Expect = 0.53
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Frame = +1
Query: 328 QKLYDDMTKENQDRLS-KFEEDDSETPVWQDRLDYLCSVGDK-ETATALATSKYEDSTLT 501
+K D E QD LS + EE + + V +D+LD L + G+K E AT L K E+ L+
Sbjct: 914 EKRQPDCQAEKQDDLSTQLEEANQKYQVLEDKLDSLEAEGEKQELATKL---KEENKLLS 970
Query: 502 TNRGSMLYLL 531
T+ GSM L+
Sbjct: 971 TSLGSMRNLI 980
>UniRef50_Q4P5P9 Cluster: Putative uncharacterized protein; n=2;
Eukaryota|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 626
Score = 35.9 bits (79), Expect = 0.92
Identities = 46/166 (27%), Positives = 68/166 (40%), Gaps = 21/166 (12%)
Frame = +1
Query: 247 AVMNGIKAGHMAPYYKEVCNDLG----WAFDQKLYDDMTKENQDRLSKFEEDDSETP--- 405
A++ GI+ MAPYY + +D D+ L + +N++ L K +E E
Sbjct: 273 ALLEGIEKDEMAPYYHLILSDASLKGLLKEDKSLLKRLEAKNKEELQKLDEKQKEVEENE 332
Query: 406 -------VWQDRLDYLCSVGDKETATA---LATSKYEDSTLTTNRGSMLYLLCLELLISM 555
V + R Y +GDKE A LA SK GS L L ++ I +
Sbjct: 333 GEMEINGVLRQRAVYYARIGDKEKALEAHDLAVSK------GAGLGSKLDLTLTKVRIGL 386
Query: 556 ---DVM*RNGKSYQ*GSRVSR-*RWRLAFRNKLKAYEAIYCLAVRD 681
D N + V W RN+LK YE ++ L++RD
Sbjct: 387 FFGDTDVVNASIAEAKKLVEEGGDWER--RNRLKVYEGLHLLSIRD 430
>UniRef50_UPI000038D597 Cluster: COG2319: FOG: WD40 repeat; n=2;
Nostoc punctiforme PCC 73102|Rep: COG2319: FOG: WD40
repeat - Nostoc punctiforme PCC 73102
Length = 1174
Score = 35.5 bits (78), Expect = 1.2
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 265 KAGHMAPYYKEVCNDLGWAFDQKLYDDMTKEN-QDRLSKFEEDDSETPVWQDRLDYLCSV 441
K G+ Y K+V + L + Q +D+TK+N Q L ++++ S T W + +D
Sbjct: 45 KLGYQNDYIKQVGSQLWRSLSQATGEDVTKKNIQAVLHRYQQSQSTTQDWGEAIDVSRFY 104
Query: 442 GDKETATALAT 474
G + LAT
Sbjct: 105 GRQAELQTLAT 115
>UniRef50_Q500K0 Cluster: Putative uncharacterized protein; n=1;
Pseudomonas syringae pv. syringae B728a|Rep: Putative
uncharacterized protein - Pseudomonas syringae pv.
syringae (strain B728a)
Length = 623
Score = 33.9 bits (74), Expect = 3.7
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +1
Query: 247 AVMNGIKAGHMAPYYKEVCNDLGWAFDQKLYD--DMTKENQDRLSKFEEDDSETPVWQDR 420
++MN + P + + DL + L D D+ K N +LSK E + + P W
Sbjct: 174 SIMNALSDTEKYPSSRIIMLDLHGEYGSALKDKADIFKINSFKLSKLAESELQIPFWALN 233
Query: 421 LDYLCSV 441
D LC +
Sbjct: 234 FDELCEI 240
>UniRef50_Q033Z6 Cluster: ABC-type sugar transport system,
periplasmic component; n=1; Lactobacillus casei ATCC
334|Rep: ABC-type sugar transport system, periplasmic
component - Lactobacillus casei (strain ATCC 334)
Length = 458
Score = 33.9 bits (74), Expect = 3.7
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = -1
Query: 542 NSKQSKYSIEPLFVVNVESSYLDVANAVAVSLSP 441
N Q+KY+I+P++V + E S + AN V ++SP
Sbjct: 65 NKSQTKYTIKPIYVGSYELSIMKYANTVGSNVSP 98
>UniRef50_A1DMH6 Cluster: Proteasome regulatory particle subunit
(RpnG), putative; n=12; Pezizomycotina|Rep: Proteasome
regulatory particle subunit (RpnG), putative -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 492
Score = 33.9 bits (74), Expect = 3.7
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 11/134 (8%)
Frame = +1
Query: 310 LGWAFDQKLYDDMTKENQDRLSKF--EEDDSETPVWQD--------RLDYLCSVGDKETA 459
+ + +D+ LY + ++N+ L F EEDD+E + R ++ VGDK+ A
Sbjct: 97 IDFPWDEALYQSLVEDNKKELEAFQKEEDDAEEAAGETEVLAARGKRAEFWARVGDKDKA 156
Query: 460 TALATSKYEDST-LTTNRGSMLYLLCLELLISMDVM*RNGKSYQ*GSRVSR*RWRLAFRN 636
+ E +T L T +L ++ + L V + S W RN
Sbjct: 157 IESHEALLEKTTFLGTKIDLVLAMVRIGLFFGDAVSVKKNIEKADTLIESGGDWDR--RN 214
Query: 637 KLKAYEAIYCLAVR 678
+LKAY+ ++ L VR
Sbjct: 215 RLKAYKGLHLLTVR 228
>UniRef50_Q6CQJ8 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome D of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 2471
Score = 33.5 bits (73), Expect = 4.9
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +1
Query: 292 KEVCNDLGWA-FDQKLYDDM-TKENQDRLSKFEEDDSETPVWQDRLDYLCSVGDKETATA 465
K+ C D G ++ +Y+D+ K N D +S++ ++ + V +D D+L V D+ + A
Sbjct: 1901 KQKCEDWGLVPIEKDIYEDLLNKFNDDSVSEWAKEHGKVIVSKDEYDHLLEVEDQAASVA 1960
Query: 466 L 468
+
Sbjct: 1961 M 1961
>UniRef50_P06738 Cluster: Glycogen phosphorylase; n=17;
Ascomycota|Rep: Glycogen phosphorylase - Saccharomyces
cerevisiae (Baker's yeast)
Length = 902
Score = 33.5 bits (73), Expect = 4.9
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +1
Query: 271 GHMAPYYKEVCNDLGWAFDQKLYDDMTKENQDRLSKFEEDDSETPVWQDRLDYLCSVG 444
GH+ P + E+ D+ W F Q + K+ D LS+ + +P Q R+ +L VG
Sbjct: 444 GHLLPRHLEIIYDINWFFLQDVAKKFPKD-VDLLSRISIIEENSPERQIRMAFLAIVG 500
>UniRef50_Q9KC56 Cluster: BH1718 protein; n=23; Bacillaceae|Rep:
BH1718 protein - Bacillus halodurans
Length = 380
Score = 32.7 bits (71), Expect = 8.6
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 11/108 (10%)
Frame = +1
Query: 250 VMNGIKAGHMAPYYKEVCNDLGWAFDQKLYD----------DMTKEN-QDRLSKFEEDDS 396
V G++ G +A K+V ++ AF Q+ D D T+E ++R K D
Sbjct: 157 VEQGVRYGELADVAKDVAEEVSAAFSQERLDRLVNIAKGLVDKTQEQTEERFRKVTLADM 216
Query: 397 ETPVWQDRLDYLCSVGDKETATALATSKYEDSTLTTNRGSMLYLLCLE 540
E W+DR L + E + +D + R + +YL +E
Sbjct: 217 EQDDWRDRYAALDKMDPTEEDLPVLEKALQDEKASIRRLATVYLGMIE 264
>UniRef50_O59795 Cluster: CASP family protein; n=1;
Schizosaccharomyces pombe|Rep: CASP family protein -
Schizosaccharomyces pombe (Fission yeast)
Length = 633
Score = 32.7 bits (71), Expect = 8.6
Identities = 29/111 (26%), Positives = 44/111 (39%)
Frame = +1
Query: 265 KAGHMAPYYKEVCNDLGWAFDQKLYDDMTKENQDRLSKFEEDDSETPVWQDRLDYLCSVG 444
+A A KE C + W QKLY DM +EN + K E Q LD+
Sbjct: 164 EAEKRAAITKEEC-EKSWLEQQKLYKDMEQENASTIQKLTSKIRELQASQ--LDHDLQAS 220
Query: 445 DKETATALATSKYEDSTLTTNRGSMLYLLCLELLISMDVM*RNGKSYQ*GS 597
E+A +K + + + +EL + V+ +N K + GS
Sbjct: 221 QNESAGLDVNAKSAEVNAILSELDDANKIIVELQAEIAVLKQNTKEQKSGS 271
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 595,361,618
Number of Sequences: 1657284
Number of extensions: 10855444
Number of successful extensions: 27930
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 26993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27899
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -