Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40154
         (749 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      28   0.069
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      28   0.069
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   4.6  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   4.6  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   4.6  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   4.6  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   6.0  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   6.0  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   6.0  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   8.0  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 28.3 bits (60), Expect = 0.069
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = -3

Query: 264 SILLFCNDERSKVKAGNPEYTMGDIAKELGRRWAAADPETKAKXDALSEKDK 109
           + +L+  + R+KV A         I + LGRRW A   E +AK   L+ +++
Sbjct: 485 AFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALGREEQAKYYELARRER 536


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 28.3 bits (60), Expect = 0.069
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = -3

Query: 264 SILLFCNDERSKVKAGNPEYTMGDIAKELGRRWAAADPETKAKXDALSEKDK 109
           + +L+  + R+KV A         I + LGRRW A   E +AK   L+ +++
Sbjct: 377 AFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALGREEQAKYYELARRER 428


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -1

Query: 551 PRSHDSLCILCAD 513
           PR  + LC++C D
Sbjct: 181 PRQQEELCLVCGD 193


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 548 RSHDSLCILCADV 510
           RSHD LC +C  V
Sbjct: 518 RSHDKLCDVCDSV 530


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +1

Query: 430 FHLSAHFFENAANITLTSGYFFLCSSRT 513
           F+++       AN+ ++ GY   C SR+
Sbjct: 526 FYIACGIMILVANVAISFGYLISCVSRS 553


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +1

Query: 430 FHLSAHFFENAANITLTSGYFFLCSSRT 513
           F+++       AN+ ++ GY   C SR+
Sbjct: 526 FYIACGIMILVANVAISFGYLISCVSRS 553


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -2

Query: 598 TVNKARMPRSRPYNKPRGRMTAY 530
           T   ARM R R YN P  +   Y
Sbjct: 338 TQGVARMSRGRQYNYPNPQQQYY 360


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -1

Query: 533 LCILCADVREEHKKKYPDVSVIFAAFSKKCAER 435
           L ILC  +  E  +    +S + +  +KKC E+
Sbjct: 212 LLILCDQILREFDQIVVILSKVKSILNKKCCEK 244


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -2

Query: 598 TVNKARMPRSRPYNKPRGRMTAY 530
           T   ARM R R YN P  +   Y
Sbjct: 286 TQGVARMSRGRQYNYPNPQQQYY 308


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
 Frame = -3

Query: 234 SKVKAGNPEYTMGDIAKELGRRWAAADPETKA-KXDALSEKDKARYDREMTAYKKGP 67
           S+ + G  ++T  DI   L      A    K  K    S+KD   YDR +   +K P
Sbjct: 532 SQKRPGAGKFTPEDINPSLCTHIIYAFATLKDHKLAEASDKDPEMYDRVVALREKNP 588


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,654
Number of Sequences: 336
Number of extensions: 3690
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)