Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40154
(749 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0562 + 4907937-4907990,4908890-4909075,4909180-4909285,490... 53 3e-07
01_01_0605 + 4497308-4497472,4497719-4497904,4498898-4499003,449... 47 2e-05
02_03_0176 + 16010806-16011095,16011983-16012061,16012389-160124... 43 2e-04
02_05_0261 + 27243898-27243938,27244068-27244157,27244293-272443... 42 5e-04
01_06_0175 + 27229878-27230056,27231102-27231159,27231230-272312... 38 0.006
08_01_0008 - 65366-65497,65588-65759,65846-65972,66058-66140,662... 38 0.009
06_03_1487 + 30477615-30477658,30477778-30477891,30477941-304780... 36 0.045
02_02_0321 - 8934512-8935504,8935581-8935715,8935831-8936217 36 0.045
09_06_0148 - 21214460-21214561,21214993-21215339,21215428-212155... 34 0.14
05_03_0417 - 13690127-13690229,13690644-13690705,13691248-136913... 32 0.56
09_06_0203 + 21555747-21555805,21555862-21555939,21556034-215560... 31 0.74
02_05_0362 + 28291891-28292263,28292432-28292616 30 1.7
06_01_0363 - 2588356-2588532,2588612-2588737,2588811-2588888,258... 29 3.0
06_03_0608 + 22705321-22705652,22705809-22706178,22706264-227066... 29 5.2
05_07_0352 - 29475855-29476330,29476421-29477165,29477689-294780... 29 5.2
08_02_0425 + 16975143-16975284,16975682-16975765,16977414-169774... 28 6.9
03_05_0882 + 28467691-28467730,28468386-28468675,28469262-284694... 28 9.1
03_02_0010 + 4903473-4903525,4904117-4904175,4904285-4904355,490... 28 9.1
>05_01_0562 +
4907937-4907990,4908890-4909075,4909180-4909285,
4909377-4909513,4909989-4910072,4910157-4910248,
4910358-4910466,4910554-4910640,4910737-4910829,
4911384-4911581,4911659-4911810,4911910-4912060,
4912174-4912272,4912362-4912535,4912680-4912758,
4912858-4912979
Length = 640
Score = 52.8 bits (121), Expect = 3e-07
Identities = 30/87 (34%), Positives = 41/87 (47%)
Frame = -3
Query: 336 KGHEGQRAKEAADERP*CTKALAISILLFCNDERSKVKAGNPEYTMGDIAKELGRRWAAA 157
+G E ++ K+ D P K + F ER+ +K NPE +IAK+LG RW
Sbjct: 542 EGSEKRKPKKKKD--PNAPKRAIAPFMYFSKAERANLKNSNPELATTEIAKKLGERWQKM 599
Query: 156 DPETKAKXDALSEKDKARYDREMTAYK 76
E K S+ DK RY E AY+
Sbjct: 600 TAEEKQPYVEQSQVDKKRYAEESAAYR 626
Score = 35.1 bits (77), Expect = 0.060
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = -1
Query: 509 REEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQDKHRFDLEMQNY 345
R K P+++ +KK ERW M+ +EKQ + E ++ DK R+ E Y
Sbjct: 573 RANLKNSNPELAT--TEIAKKLGERWQKMTAEEKQPYVEQSQVDKKRYAEESAAY 625
>01_01_0605 +
4497308-4497472,4497719-4497904,4498898-4499003,
4499062-4499216,4499341-4499424,4499498-4499589,
4499729-4499837,4499944-4500030,4500153-4500245,
4501144-4501341,4501481-4501632,4501724-4501874,
4501975-4502073,4502159-4502326,4502624-4502702,
4502870-4503000
Length = 684
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/87 (29%), Positives = 40/87 (45%)
Frame = -3
Query: 336 KGHEGQRAKEAADERP*CTKALAISILLFCNDERSKVKAGNPEYTMGDIAKELGRRWAAA 157
+G + ++ K+ D P K + F ER +K NP+ +IAK+LG W
Sbjct: 583 EGSDKRKPKKKKD--PNAPKRAMTPFMYFSMAERGNMKNNNPDLPTTEIAKKLGEMWQKM 640
Query: 156 DPETKAKXDALSEKDKARYDREMTAYK 76
E K S+ DK RY++E Y+
Sbjct: 641 TGEEKQPYIQQSQVDKKRYEKESAVYR 667
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = -1
Query: 509 REEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQDKHRFDLEMQNY 345
R K PD+ +KK E W M+ +EKQ + + ++ DK R++ E Y
Sbjct: 614 RGNMKNNNPDLPT--TEIAKKLGEMWQKMTGEEKQPYIQQSQVDKKRYEKESAVY 666
>02_03_0176 +
16010806-16011095,16011983-16012061,16012389-16012464,
16012541-16012630,16012878-16013031,16013172-16013181,
16013240-16013407,16014087-16014485,16014580-16014990
Length = 558
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = -3
Query: 252 FCNDERSKVKAGNPEYTMGD--IAKELGRRWAAADPETKAKXDALSEKDKARYDREMTAY 79
F D+ K+K PEY D I+K +G RW PE KA +DKARY R++ Y
Sbjct: 386 FFQDQHRKLK---PEYPGQDRLISKMIGERWNNLGPEDKAVYQEKGVEDKARYQRQLALY 442
Query: 78 KK 73
++
Sbjct: 443 RE 444
Score = 36.3 bits (80), Expect = 0.026
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = -1
Query: 509 REEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQDKHRFDLEMQNY 345
+++H+K P+ SK ERWN + ++K + E +DK R+ ++ Y
Sbjct: 388 QDQHRKLKPEYPGQDRLISKMIGERWNNLGPEDKAVYQEKGVEDKARYQRQLALY 442
>02_05_0261 +
27243898-27243938,27244068-27244157,27244293-27244350,
27244441-27244485,27244778-27244855,27244940-27245041,
27245150-27245173
Length = 145
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/68 (29%), Positives = 36/68 (52%)
Frame = -1
Query: 548 RSHDSLCILCADVREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQDKHR 369
R + + ++ R+E++ +PD + AA SK E+W MSE+EK + + A Q K
Sbjct: 35 RPPSAFFVFMSEFRQEYQAAHPDNKSV-AAVSKAAGEKWRAMSEQEKAPYVDKAGQKKQD 93
Query: 368 FDLEMQNY 345
++ N+
Sbjct: 94 YEKTKANF 101
>01_06_0175 +
27229878-27230056,27231102-27231159,27231230-27231274,
27232711-27232791,27232884-27232922
Length = 133
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/62 (24%), Positives = 36/62 (58%)
Frame = -1
Query: 515 DVREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQDKHRFDLEMQNYVPP 336
D R+ +K++ P V + K C E+WNTM+ +E+ +++++A + + ++ + +
Sbjct: 62 DFRKTYKEENPSVKSM-QEVGKACGEKWNTMTFEERVKYYDIATEKRAEYEKAVAEFDKK 120
Query: 335 KD 330
K+
Sbjct: 121 KE 122
>08_01_0008 -
65366-65497,65588-65759,65846-65972,66058-66140,
66232-66329
Length = 203
Score = 37.9 bits (84), Expect = 0.009
Identities = 17/65 (26%), Positives = 39/65 (60%)
Frame = -1
Query: 560 QQAPRSHDSLCILCADVREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQ 381
++ R + + +D R+E+K ++PD + +A +K+ ERW +MS+++K+ + + A +
Sbjct: 90 KKGKRPPTAFFLFMSDFRKEYKAEHPDNKSV-SAVAKEGGERWKSMSDEDKKPYLDKAAE 148
Query: 380 DKHRF 366
K +
Sbjct: 149 LKAEY 153
Score = 31.5 bits (68), Expect = 0.74
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = -3
Query: 264 SILLFCNDERSKVKAGNPEY-TMGDIAKELGRRW-AAADPETKAKXDALSEKDKARY 100
+ LF +D R + KA +P+ ++ +AKE G RW + +D + K D +E KA Y
Sbjct: 98 AFFLFMSDFRKEYKAEHPDNKSVSAVAKEGGERWKSMSDEDKKPYLDKAAEL-KAEY 153
>06_03_1487 +
30477615-30477658,30477778-30477891,30477941-30478028,
30478186-30478230,30478330-30478410,30478498-30478608,
30478907-30478927
Length = 167
Score = 35.5 bits (78), Expect = 0.045
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -3
Query: 237 RSKVKAGNPEY-TMGDIAKELGRRWAAADPETKAKXDALSEKDKARYDREMTAYKKG 70
R + K NP+ ++ + K G RW + KA A + K KA Y++ + AY KG
Sbjct: 67 RKEFKEKNPKNKSVAAVGKAAGDRWKSLTEADKAPYVAKANKLKAEYNKAIAAYNKG 123
Score = 34.7 bits (76), Expect = 0.079
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = -1
Query: 320 RGRKRQQMKDPNAPKRSLSAFFCF 249
+GRK + KDPN PKR+ SAFF F
Sbjct: 29 KGRKGKAGKDPNKPKRAPSAFFVF 52
>02_02_0321 - 8934512-8935504,8935581-8935715,8935831-8936217
Length = 504
Score = 35.5 bits (78), Expect = 0.045
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = -3
Query: 336 KGHEGQRAK---EAADERP*CTKALAISILLFCNDERSKVKAGNPEYTMGDIAKELGRRW 166
K EG++ K +A ER K + +L+C D+ +++K +P+ +++ LG +W
Sbjct: 140 KDQEGEKKKGKGKAGHER----KKPCPAYVLWCKDQWNEIKKESPDADFKEVSNALGAKW 195
Query: 165 AAADPETKAKXDALSEKDKARY 100
A E K + ++K Y
Sbjct: 196 KALGAEEKQPYEERYRQEKEAY 217
Score = 34.7 bits (76), Expect = 0.079
Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Frame = -1
Query: 506 EEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQDKHRFDLEMQNYVPPKDM 327
EE ++ + + K+ AE + E++ QR + + +F E + D
Sbjct: 207 EERYRQEKEAYLQVVGQEKREAEAMKLLEEEQMQRTAKELLEQYLKFRQEADDDGDGGDN 266
Query: 326 KV---RGRKRQQMKDPNAPKRSLSAFFCF 249
K +G+K+++ KDP+ PK+ +SA+F +
Sbjct: 267 KKASKKGKKKKKEKDPSKPKQPMSAYFVY 295
Score = 33.1 bits (72), Expect = 0.24
Identities = 18/68 (26%), Positives = 29/68 (42%)
Frame = -1
Query: 569 KAIQQAPRSHDSLCILCADVREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEM 390
KA + + + + C D E KK+ PD F S +W + +EKQ + E
Sbjct: 152 KAGHERKKPCPAYVLWCKDQWNEIKKESPDAD--FKEVSNALGAKWKALGAEEKQPYEER 209
Query: 389 AEQDKHRF 366
Q+K +
Sbjct: 210 YRQEKEAY 217
Score = 31.5 bits (68), Expect = 0.74
Identities = 22/96 (22%), Positives = 44/96 (45%)
Frame = -3
Query: 360 GDAELCTTKGHEGQRAKEAADERP*CTKALAISILLFCNDERSKVKAGNPEYTMGDIAKE 181
GD + + KG + ++ K+ + +P K + ++ R+ + A + + +I +
Sbjct: 264 GDNKKASKKGKKKKKEKDPS--KP---KQPMSAYFVYTQQRRAALVA--EKKNVPEIGRI 316
Query: 180 LGRRWAAADPETKAKXDALSEKDKARYDREMTAYKK 73
G W A KA +A + K + Y EM AY++
Sbjct: 317 TGEEWKAMSEAEKAPFEAAARKQREEYQVEMAAYRQ 352
Score = 31.5 bits (68), Expect = 0.74
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = -1
Query: 440 ERWNTMSEKEKQRFHEMAEQDKHRFDLEMQNYVPPKDMKVRGRKRQQMKDPNAPKR 273
E W MSE EK F A + + + +EM Y K + +++++ + K+
Sbjct: 319 EEWKAMSEAEKAPFEAAARKQREEYQVEMAAYRQRKQEEAACQEKEEEEQKKIMKQ 374
Score = 28.7 bits (61), Expect = 5.2
Identities = 24/92 (26%), Positives = 35/92 (38%), Gaps = 4/92 (4%)
Frame = -3
Query: 336 KGHEGQRAKE----AADERP*CTKALAISILLFCNDERSKVKAGNPEYTMGDIAKELGRR 169
K E QR K+ AA P K A S LLF + R ++ P + + +
Sbjct: 392 KTKEEQRKKKVGGAAAAADPNRPKKPASSFLLFSKEARRQLAEERPGVASSTLTALVSVK 451
Query: 168 WAAADPETKAKXDALSEKDKARYDREMTAYKK 73
W K + + + A Y R+M Y K
Sbjct: 452 WKELGEAEKQAWNGKAAEAMAAYKRDMEEYTK 483
>09_06_0148 -
21214460-21214561,21214993-21215339,21215428-21215538,
21215673-21215835,21215921-21215999,21216110-21216228
Length = 306
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = -1
Query: 497 KKKYPDVSVIFA----AFSKKCAERWNTMSEKEKQRFHEMAEQDKHRFDLEMQNY 345
K+K+P++ +S+ + WN ++ +K ++ + +DK R+ EMQ Y
Sbjct: 239 KEKHPELKATHPHREREYSRMIGDAWNRLAADDKMVYYRHSAEDKERYKREMQEY 293
Score = 29.5 bits (63), Expect = 3.0
Identities = 22/84 (26%), Positives = 39/84 (46%)
Frame = -3
Query: 324 GQRAKEAADERP*CTKALAISILLFCNDERSKVKAGNPEYTMGDIAKELGRRWAAADPET 145
G+R ++ A RP A + F ++ ++KA +P + + ++ +G W +
Sbjct: 218 GRRQRDPAQPRP---NRSAYNF--FFKEKHPELKATHP-HREREYSRMIGDAWNRLAADD 271
Query: 144 KAKXDALSEKDKARYDREMTAYKK 73
K S +DK RY REM Y +
Sbjct: 272 KMVYYRHSAEDKERYKREMQEYNE 295
>05_03_0417 -
13690127-13690229,13690644-13690705,13691248-13691330,
13691797-13691911,13692228-13692287,13693375-13693474,
13694781-13694965
Length = 235
Score = 31.9 bits (69), Expect = 0.56
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = -3
Query: 234 SKVKAGNPEYTMGDIAKELGRRWAAADPETKAKXDALSEKDKARYDREMTAYKKGP 67
+K+ P+ T+ D+A L RW A K + + S+K+K + +R + KGP
Sbjct: 73 AKIAMNLPDKTVRDVA--LRCRWMAKKESNKKRKEESSKKNKEKKERANDSSSKGP 126
>09_06_0203 +
21555747-21555805,21555862-21555939,21556034-21556091,
21556191-21556235,21556514-21556549,21556855-21556935,
21557016-21557087,21557184-21557195
Length = 146
Score = 31.5 bits (68), Expect = 0.74
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -1
Query: 314 RKRQQMKDPNAPKRSLSAFFCF 249
RK + KDPN PKR SAFF F
Sbjct: 24 RKTKAEKDPNKPKRPPSAFFVF 45
>02_05_0362 + 28291891-28292263,28292432-28292616
Length = 185
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/68 (25%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Frame = -3
Query: 747 NQYRRQPTNFTGTTFQGCSATTRYRQHYRGNLPLYRSCSN-----RHSSKLYSKQQ*IRP 583
N+YR Q T+F+G + + CS + + ++ + + C + +HS ++ S + +RP
Sbjct: 15 NRYRSQLTSFSGPSKKYCSLSVKNKKKKKKKKKKKKKCCSTAEITKHSVRILSHRT-VRP 73
Query: 582 GCPVQGHT 559
C + H+
Sbjct: 74 FCSTRLHS 81
>06_01_0363 -
2588356-2588532,2588612-2588737,2588811-2588888,
2589584-2589715,2590768-2590878,2590964-2591191
Length = 283
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -3
Query: 498 QEEIP*CQCYICSILEKVRREVEYNVGKRKTAVP 397
+E+IP +C +C E++ RE+ V K++ A+P
Sbjct: 42 KEDIPYIRCQVC---ERIAREISAQVAKKQQALP 72
>06_03_0608 +
22705321-22705652,22705809-22706178,22706264-22706656,
22707183-22707204,22707257-22707928,22708019-22708494
Length = 754
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = -1
Query: 521 CADVREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKE--KQRFHEMAEQDKHRFDLEMQN 348
C R++ + D++++F+ ++ WN MSE + E ++D D E
Sbjct: 239 CGKFRKKPLQNVDDLNIMFSDIINDASDHWNPMSENPIIPEHMTEEVQEDNLVVDDEEVQ 298
Query: 347 YVPPKDM 327
P ++M
Sbjct: 299 ETPMEEM 305
>05_07_0352 -
29475855-29476330,29476421-29477165,29477689-29478081,
29478167-29478473,29478694-29479019
Length = 748
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = -1
Query: 521 CADVREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKE--KQRFHEMAEQDKHRFDLEMQN 348
C R++ + D++++F+ ++ WN MSE + E ++D D E
Sbjct: 216 CGKFRKKPLQNVDDLNIMFSDIINDASDHWNPMSENPIIPEHMTEEVQEDNLVVDDEEVQ 275
Query: 347 YVPPKDM 327
P ++M
Sbjct: 276 ETPMEEM 282
>08_02_0425 +
16975143-16975284,16975682-16975765,16977414-16977496,
16977610-16977652,16978311-16978378,16978954-16979043,
16981444-16981620,16982291-16982354,16982452-16982500,
16983399-16983858
Length = 419
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -2
Query: 517 QTCEKNTRRNTLMSVLYLQHSRKSAQRGGIQCRKKKNSGSMR 392
Q C KN R LM + + R+ + G++ R+KKN+G +
Sbjct: 156 QCCRKNGSRTGLM--YWGERGREGGKGRGVKRRRKKNTGGKK 195
>03_05_0882 +
28467691-28467730,28468386-28468675,28469262-28469411,
28470126-28470214,28470331-28470440,28470545-28470639,
28471110-28471162,28471374-28471539,28471909-28472001,
28472304-28472432,28472549-28472668,28472862-28472942,
28473495-28473602,28473895-28474038,28474120-28474218,
28474300-28474379,28474830-28474922,28475197-28475320
Length = 687
Score = 27.9 bits (59), Expect = 9.1
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = -1
Query: 518 ADVREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQDK 375
+DV ++KK Y D FAAFSKK EK+ QR+ E+ +DK
Sbjct: 566 SDVETKYKKMYEDDINPFAAFSKK---------EKD-QRYKELGLRDK 603
>03_02_0010 +
4903473-4903525,4904117-4904175,4904285-4904355,
4904469-4904585,4907001-4907024,4907055-4907117,
4907303-4907407,4907552-4907602,4907702-4908535
Length = 458
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1
Query: 509 REEHKKKYPDVSVI 468
REEH KKYPD VI
Sbjct: 66 REEHLKKYPDAKVI 79
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,078,307
Number of Sequences: 37544
Number of extensions: 412010
Number of successful extensions: 1408
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1404
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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