Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40154
(749 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21901| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 2e-15
SB_37758| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_7134| Best HMM Match : HMG_box (HMM E-Value=2e-16) 48 8e-06
SB_21059| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_23256| Best HMM Match : HMG_box (HMM E-Value=3.3e-22) 45 8e-05
SB_18968| Best HMM Match : HMG_box (HMM E-Value=1.2e-19) 38 0.009
SB_1832| Best HMM Match : HMG_box (HMM E-Value=1.7e-22) 38 0.011
SB_16438| Best HMM Match : HMG_box (HMM E-Value=7.2e-31) 38 0.011
SB_12182| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_46509| Best HMM Match : HMG_box (HMM E-Value=4.2e-10) 37 0.020
SB_42643| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.081
SB_33348| Best HMM Match : HMG_box (HMM E-Value=3.2e-34) 35 0.081
SB_3516| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_49511| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_16012| Best HMM Match : Glyco_hydro_20 (HMM E-Value=0) 33 0.33
SB_12646| Best HMM Match : SSrecog (HMM E-Value=0) 33 0.33
SB_29734| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_23680| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_31139| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_26162| Best HMM Match : HMG_box (HMM E-Value=1.5e-31) 30 1.7
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_52386| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_24733| Best HMM Match : Shugoshin_C (HMM E-Value=4.2) 29 5.3
SB_25340| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_29666| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_15976| Best HMM Match : Vicilin_N (HMM E-Value=5.7) 28 9.3
SB_3457| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_1582| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
>SB_21901| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 80.2 bits (189), Expect = 2e-15
Identities = 45/97 (46%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Frame = -1
Query: 515 DVREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQDKHRFDLEMQNYVPP 336
D RE+ +++ S+ A FSK AE+W MSE+EK+ F + A +DK RF EMQ+Y PP
Sbjct: 25 DQREKLQREEGKFSL--ADFSKVSAEKWKNMSEEEKETFVQKAGKDKERFKEEMQSYTPP 82
Query: 335 KDMKVRGRKR-QQMKDPNAPKRSLSAFFCFATMNVRR 228
+ +KR +Q KDPN PKR LSA+F F +N++R
Sbjct: 83 PSEESGKKKRKKQTKDPNKPKRCLSAYFHF--INLKR 117
Score = 54.0 bits (124), Expect = 1e-07
Identities = 27/87 (31%), Positives = 45/87 (51%)
Frame = -3
Query: 324 GQRAKEAADERP*CTKALAISILLFCNDERSKVKAGNPEYTMGDIAKELGRRWAAADPET 145
G++ ++ + P K + F N +R VK NP + G ++K LG W+ +
Sbjct: 88 GKKKRKKQTKDPNKPKRCLSAYFHFINLKRDDVKKDNPNASGGALSKVLGEMWSKMTDDD 147
Query: 144 KAKXDALSEKDKARYDREMTAYKKGPL 64
K + +++KDK RY+ EM A+K G L
Sbjct: 148 KTQYQDMAKKDKVRYESEMKAFKDGKL 174
Score = 41.5 bits (93), Expect = 7e-04
Identities = 22/69 (31%), Positives = 42/69 (60%)
Frame = -1
Query: 509 REEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQDKHRFDLEMQNYVPPKD 330
R++ KK P+ S A SK E W+ M++ +K ++ +MA++DK R++ EM+ + KD
Sbjct: 117 RDDVKKDNPNASG--GALSKVLGEMWSKMTDDDKTQYQDMAKKDKVRYESEMKAF---KD 171
Query: 329 MKVRGRKRQ 303
K+ ++ +
Sbjct: 172 GKLPAKQNK 180
Score = 37.9 bits (84), Expect = 0.009
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = -3
Query: 252 FCNDERSKVKAGNPEYTMGDIAKELGRRWAAADPETKAKXDALSEKDKARYDREMTAYKK 73
F D+R K++ ++++ D +K +W E K + KDK R+ EM +Y
Sbjct: 22 FLQDQREKLQREEGKFSLADFSKVSAEKWKNMSEEEKETFVQKAGKDKERFKEEMQSYTP 81
Query: 72 GP 67
P
Sbjct: 82 PP 83
>SB_37758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/83 (33%), Positives = 41/83 (49%)
Frame = -3
Query: 321 QRAKEAADERP*CTKALAISILLFCNDERSKVKAGNPEYTMGDIAKELGRRWAAADPETK 142
+R KE +P + + F N R VK +P T +I K LG+ W + PE K
Sbjct: 184 KRKKEYDLNKPKAPVTGYVHYVRFLNSRRESVKHQHPHLTFPEITKMLGQEWNSLLPEEK 243
Query: 141 AKXDALSEKDKARYDREMTAYKK 73
K +E+DK RY E+ AY++
Sbjct: 244 QKFLDEAEEDKKRYVEELRAYQQ 266
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/77 (31%), Positives = 42/77 (54%)
Frame = -1
Query: 509 REEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQDKHRFDLEMQNYVPPKD 330
RE K ++P ++ F +K + WN++ +EKQ+F + AE+DK R+ E++ Y +
Sbjct: 212 RESVKHQHPHLT--FPEITKMLGQEWNSLLPEEKQKFLDEAEEDKKRYVEELRAYQQSEQ 269
Query: 329 MKVRGRKRQQMKDPNAP 279
+ KRQ +K P
Sbjct: 270 YQA-FVKRQHVKRTKHP 285
>SB_7134| Best HMM Match : HMG_box (HMM E-Value=2e-16)
Length = 228
Score = 48.0 bits (109), Expect = 8e-06
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = -1
Query: 527 ILCADVREEHKKKYPDVSVIFA--AFSKKCAERWNTMSEKEKQRFHEMAEQDKHRFDLEM 354
+ C R ++ + D + + +K A+ WN + EK+ ++EM E+DK R++LEM
Sbjct: 64 MFCQQQRTVMQEDHKDATAVMGHHELTKSLAKEWNNLLPDEKKVYYEMYERDKERYELEM 123
Query: 353 QNYVPPKDMKVRGRKRQQMKDPNAPKR 273
+ Y K K+Q KDP++ KR
Sbjct: 124 KQYSSDKPPS----KKQ--KDPSSKKR 144
Score = 44.4 bits (100), Expect = 1e-04
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Frame = -3
Query: 336 KGHEGQRAKEAADERP*CTKALAISILLFCNDERSKVKAGNPEYT--MG--DIAKELGRR 169
KG AK+ ++ P K A + +FC +R+ ++ + + T MG ++ K L +
Sbjct: 37 KGKSRSSAKQDKEKDPNAPKKPANAFFMFCQQQRTVMQEDHKDATAVMGHHELTKSLAKE 96
Query: 168 WAAADPETKAKXDALSEKDKARYDREMTAY 79
W P+ K + E+DK RY+ EM Y
Sbjct: 97 WNNLLPDEKKVYYEMYERDKERYELEMKQY 126
Score = 31.1 bits (67), Expect = 1.00
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1
Query: 311 KRQQMKDPNAPKRSLSAFFCF 249
K+ + KDPNAPK+ +AFF F
Sbjct: 45 KQDKEKDPNAPKKPANAFFMF 65
>SB_21059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1024
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/69 (31%), Positives = 37/69 (53%)
Frame = -3
Query: 279 KALAISILLFCNDERSKVKAGNPEYTMGDIAKELGRRWAAADPETKAKXDALSEKDKARY 100
KA + F N++R KV++ +PE ++ K LG W+ + K + +E+DK RY
Sbjct: 145 KAPLTGYVQFLNEQREKVRSEHPELPFPEVTKILGAEWSKMSQDDKQRYLDDAERDKERY 204
Query: 99 DREMTAYKK 73
E+ Y+K
Sbjct: 205 IIELENYQK 213
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/75 (30%), Positives = 43/75 (57%)
Frame = -1
Query: 509 REEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQDKHRFDLEMQNYVPPKD 330
RE+ + ++P++ F +K W+ MS+ +KQR+ + AE+DK R+ +E++NY
Sbjct: 159 REKVRSEHPELP--FPEVTKILGAEWSKMSQDDKQRYLDDAERDKERYIIELENYQKTDA 216
Query: 329 MKVRGRKRQQMKDPN 285
K +K+ + K N
Sbjct: 217 YKSFVKKQIERKRKN 231
>SB_23256| Best HMM Match : HMG_box (HMM E-Value=3.3e-22)
Length = 523
Score = 44.8 bits (101), Expect = 8e-05
Identities = 23/82 (28%), Positives = 40/82 (48%)
Frame = -3
Query: 318 RAKEAADERP*CTKALAISILLFCNDERSKVKAGNPEYTMGDIAKELGRRWAAADPETKA 139
R ++ A + KA + F N+ R KV++ NP+ ++ + LG W+ K
Sbjct: 165 RKRKKAHKDVNAPKAPLTGYVRFLNEHREKVRSENPDLPFHEVTRILGNMWSQLPTPQKQ 224
Query: 138 KXDALSEKDKARYDREMTAYKK 73
+EKDK RY +E+ Y++
Sbjct: 225 LFLEEAEKDKERYMKELEEYQR 246
Score = 35.5 bits (78), Expect = 0.046
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = -1
Query: 509 REEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQDKHRFDLEMQNYVPPKD 330
RE+ + + PD+ F ++ W+ + +KQ F E AE+DK R+ E++ Y
Sbjct: 192 REKVRSENPDLP--FHEVTRILGNMWSQLPTPQKQLFLEEAEKDKERYMKELEEYQRTDT 249
Query: 329 MKVRGRKRQQMK 294
K+ K++ +K
Sbjct: 250 YKMFIAKQKALK 261
>SB_18968| Best HMM Match : HMG_box (HMM E-Value=1.2e-19)
Length = 1204
Score = 37.9 bits (84), Expect = 0.009
Identities = 25/91 (27%), Positives = 41/91 (45%)
Frame = -3
Query: 360 GDAELCTTKGHEGQRAKEAADERP*CTKALAISILLFCNDERSKVKAGNPEYTMGDIAKE 181
GD + KG + +R + E P K L+ + +F + ++ ++ NP G+IAK
Sbjct: 903 GDTKKKRKKGEKRKRKTKIEGEPP---KPLS-AYQIFFKETQAAIRLQNPSAQFGEIAKI 958
Query: 180 LGRRWAAADPETKAKXDALSEKDKARYDREM 88
+G+ W E K E KA Y + M
Sbjct: 959 VGQMWENLPEEQKKVYHCKHETAKAEYQKAM 989
>SB_1832| Best HMM Match : HMG_box (HMM E-Value=1.7e-22)
Length = 299
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/63 (25%), Positives = 35/63 (55%)
Frame = -1
Query: 521 CADVREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQDKHRFDLEMQNYV 342
C R + KKYP++ + K +++W MSE+ K+ + E E++K ++ ++ +++
Sbjct: 163 CQKHRAKLAKKYPNLKS--TELAAKLSKKWRKMSEERKKAYTEQYEEEKKEYETQLLDFL 220
Query: 341 PPK 333
K
Sbjct: 221 KNK 223
Score = 32.3 bits (70), Expect = 0.43
Identities = 14/64 (21%), Positives = 28/64 (43%)
Frame = -3
Query: 264 SILLFCNDERSKVKAGNPEYTMGDIAKELGRRWAAADPETKAKXDALSEKDKARYDREMT 85
S +C R+K+ P ++A +L ++W E K E++K Y+ ++
Sbjct: 158 SYFRYCQKHRAKLAKKYPNLKSTELAAKLSKKWRKMSEERKKAYTEQYEEEKKEYETQLL 217
Query: 84 AYKK 73
+ K
Sbjct: 218 DFLK 221
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/56 (21%), Positives = 26/56 (46%)
Frame = -3
Query: 255 LFCNDERSKVKAGNPEYTMGDIAKELGRRWAAADPETKAKXDALSEKDKARYDREM 88
L+ N R + NP+ + + K+L R+W D + K + + +Y +++
Sbjct: 236 LWANQARKDLLVSNPDISAKKLKKKLKRKWKEIDEKGKKTWIKKEKTEMRKYQKKI 291
>SB_16438| Best HMM Match : HMG_box (HMM E-Value=7.2e-31)
Length = 690
Score = 37.5 bits (83), Expect = 0.011
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = -3
Query: 318 RAKEAADERP*CTKALAISILLFCNDERSKVKA-----GNPEYTMGDIAKELGRRWAAAD 154
R K+A + P K + + + F +D R+K+KA G P ++AK G W +
Sbjct: 485 RKKKAKGDGP-VVKRASSAYIHFTSDFRAKLKAKSAKSGTPLPKANEVAKLAGEEWKKLN 543
Query: 153 PETKAKXDALSEKDKARYDRE 91
E K A +E DK RY +E
Sbjct: 544 DEQKKPYVAKAEADKQRYLKE 564
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = -1
Query: 455 SKKCAERWNTMSEKEKQRFHEMAEQDKHRFDLEMQNYVPPKDMKVRGRKRQQMKDPNAPK 276
+K E W +++++K+ + AE DK R+ +K G K KDP+ PK
Sbjct: 532 AKLAGEEWKKLNDEQKKPYVAKAEADKQRY------------LKESG-KNDPKKDPDKPK 578
Query: 275 RSLSAFFCF 249
R +A+F F
Sbjct: 579 RPPTAYFLF 587
>SB_12182| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1361
Score = 37.1 bits (82), Expect = 0.015
Identities = 15/57 (26%), Positives = 32/57 (56%)
Frame = -3
Query: 258 LLFCNDERSKVKAGNPEYTMGDIAKELGRRWAAADPETKAKXDALSEKDKARYDREM 88
LLF ++ R ++ +PEY G+I++ +G W A KA+ + ++ ++ + E+
Sbjct: 1276 LLFSHEMRGIIRKEHPEYAFGEISRLIGEEWRNASAARKAEYENKAQMQLSQLETEV 1332
>SB_46509| Best HMM Match : HMG_box (HMM E-Value=4.2e-10)
Length = 145
Score = 36.7 bits (81), Expect = 0.020
Identities = 15/56 (26%), Positives = 31/56 (55%)
Frame = -3
Query: 258 LLFCNDERSKVKAGNPEYTMGDIAKELGRRWAAADPETKAKXDALSEKDKARYDRE 91
LLF ++ R ++ +PEY G+I++ +G W A KA+ + ++ ++ + E
Sbjct: 43 LLFSHEMRGIIRKEHPEYAFGEISRLIGEEWRNASAARKAEYENKAQMQLSQLETE 98
>SB_42643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 34.7 bits (76), Expect = 0.081
Identities = 17/66 (25%), Positives = 33/66 (50%)
Frame = -3
Query: 264 SILLFCNDERSKVKAGNPEYTMGDIAKELGRRWAAADPETKAKXDALSEKDKARYDREMT 85
+ +++ +ER K+ NP+ +I+K LG W + K ++K +A++ +E
Sbjct: 333 AFMVWSREERRKIAQENPKMHNSEISKRLGSEWKQLADDDKKPFVEEAKKLRAQHMKEHP 392
Query: 84 AYKKGP 67
YK P
Sbjct: 393 DYKYRP 398
>SB_33348| Best HMM Match : HMG_box (HMM E-Value=3.2e-34)
Length = 179
Score = 34.7 bits (76), Expect = 0.081
Identities = 17/66 (25%), Positives = 33/66 (50%)
Frame = -3
Query: 264 SILLFCNDERSKVKAGNPEYTMGDIAKELGRRWAAADPETKAKXDALSEKDKARYDREMT 85
+ +++ +ER K+ NP+ +I+K LG W + K ++K +A++ +E
Sbjct: 16 AFMVWSREERRKIAQENPKMHNSEISKRLGSEWKQLADDDKKPFVEEAKKLRAQHMKEHP 75
Query: 84 AYKKGP 67
YK P
Sbjct: 76 DYKYRP 81
>SB_3516| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 642
Score = 33.5 bits (73), Expect = 0.19
Identities = 22/94 (23%), Positives = 43/94 (45%)
Frame = -3
Query: 348 LCTTKGHEGQRAKEAADERP*CTKALAISILLFCNDERSKVKAGNPEYTMGDIAKELGRR 169
L + G EG+ E DE + + + +++ ER ++ NPE +++K LG
Sbjct: 345 LGSLSGSEGRARTEKDDETERIKRPMN-AFMVWAQVERRRLADANPELHNAELSKMLGLT 403
Query: 168 WAAADPETKAKXDALSEKDKARYDREMTAYKKGP 67
W A + K +E+ + ++ ++ YK P
Sbjct: 404 WRALNSTQKRPFVDEAERLRLQHMQDYPNYKYRP 437
>SB_49511| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 32.7 bits (71), Expect = 0.33
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = -1
Query: 401 FHEMAEQDKHRFDLEMQNYVPPKDMKVRGRKRQQMKDPNAPKR 273
++EM E+DK R++LEM+ Y K K+Q KDP++ KR
Sbjct: 37 YYEMYERDKERYELEMKQYSSDKPPS----KKQ--KDPSSKKR 73
>SB_16012| Best HMM Match : Glyco_hydro_20 (HMM E-Value=0)
Length = 1788
Score = 32.7 bits (71), Expect = 0.33
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +1
Query: 313 RPLTFMSFGGT*FCISKSNRCLSCSAISWNRCFSF--SDIVFHLSAHFFENAANITLTSG 486
+PLT FGG + +C ++ ++ SDIV L +F E ANIT+ G
Sbjct: 1304 QPLTVYHFGGDEVAHGAWTKSSACEQLAQRMGYNLTGSDIVDKLKGYFVERVANITVNDG 1363
>SB_12646| Best HMM Match : SSrecog (HMM E-Value=0)
Length = 783
Score = 32.7 bits (71), Expect = 0.33
Identities = 23/86 (26%), Positives = 47/86 (54%)
Frame = -1
Query: 515 DVREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQDKHRFDLEMQNYVPP 336
DVREE + + P S + S+ +++ ++K++ + + K + + ++V
Sbjct: 469 DVREEFESE-PSSSEASGSDSEGESKKKKKEKPEKKRKAEKPPKSPKKK--AKTASFVET 525
Query: 335 KDMKVRGRKRQQMKDPNAPKRSLSAF 258
+ +G K++ KDPNAPKR++SA+
Sbjct: 526 GEKGKKGGKKK--KDPNAPKRAMSAY 549
>SB_29734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 32.3 bits (70), Expect = 0.43
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = -3
Query: 264 SILLFCNDERSKVKAGNPEYTMGDIAKELGRRWAAADPETKAKXDALSEKDKARYDREMT 85
+ +++ ER K+ +P+ +I+K LG+RW K SE+ + R+ +
Sbjct: 51 AFMVWSQIERRKMAEEHPDMHNAEISKRLGKRWKLLSESEKRPFVEESERLRIRHMQAYP 110
Query: 84 AYKKGP 67
YK P
Sbjct: 111 DYKYRP 116
>SB_23680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 31.9 bits (69), Expect = 0.57
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = -3
Query: 255 LFCNDERSKVKAGNPEYTMGDIAKELGRRWAAADPETKAKXDALSEKDKARYDREMTAYK 76
LF + +K+KA N + DI +ELG +W + + SE + Y+ E+ ++
Sbjct: 383 LFMRENFAKIKAENQGMSNPDIMRELGAKWRNLPFSEREEIRRKSEDAQKTYEAEIVEFE 442
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/55 (32%), Positives = 22/55 (40%)
Frame = -3
Query: 306 AADERP*CTKALAISILLFCNDERSKVKAGNPEYTMGDIAKELGRRWAAADPETK 142
A D P K + F D KVK NP +I K L +WA +P K
Sbjct: 298 ALDAAPKKHKRPTPAFFRFRQDYADKVKEENPHLKDAEIRKHLSDQWANLEPSVK 352
>SB_31139| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -3
Query: 240 ERSKVKAGN-PEYTMGDIAKELGRRWAAADPETKAKXDALSEKDKARYDREMTAYKKGP 67
ER ++K+ P +I+K LG W A E K +++ +A++ RE YK P
Sbjct: 22 ERRRIKSQECPRMHNSEISKILGCEWKAMKDELKQPYIEKAKELQAQHSRENPGYKYKP 80
>SB_26162| Best HMM Match : HMG_box (HMM E-Value=1.5e-31)
Length = 367
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -1
Query: 464 AAFSKKCAERWNTMSEKEKQRFHEMAEQDKHRFDLEMQNY-VPPKDMKVRGRKRQQ 300
A SK + WN ++ K+K+ F E AE+ + R E NY PK + R+ Q
Sbjct: 122 AEISKLLGKAWNELTTKDKRPFVEKAERLRIRHMKEHPNYRYTPKRRGRQDRRNGQ 177
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/66 (24%), Positives = 30/66 (45%)
Frame = -3
Query: 264 SILLFCNDERSKVKAGNPEYTMGDIAKELGRRWAAADPETKAKXDALSEKDKARYDREMT 85
S +++ R K NP+ +I+K LG+ W + K +E+ + R+ +E
Sbjct: 100 SFMIWAKVMRRKFAEENPKLHNAEISKLLGKAWNELTTKDKRPFVEKAERLRIRHMKEHP 159
Query: 84 AYKKGP 67
Y+ P
Sbjct: 160 NYRYTP 165
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = -1
Query: 518 ADVREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQDKHRFDLEMQNYVP 339
+D R++ K K + A+ + E +SE EK R E++E+D +L N
Sbjct: 3144 SDERDDLKAKLEETEETLASTKENLEETSTKLSETEKLRSSEVSERDSSIEELRTNNENL 3203
Query: 338 PKDMK 324
D+K
Sbjct: 3204 RGDLK 3208
>SB_52386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 494 KKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQDKHRFDLEMQNYV-PPKDMKVR 318
K+YP + A S + E WN +S ++++ + + A + K + E N+V P+ K
Sbjct: 121 KRYPQANN--AEISIRLGEIWNDLSSEQQKPYFDEATRLKDKHKAEHPNWVYQPRPAK-- 176
Query: 317 GRKRQQMKDPNA 282
R+ Q+ P A
Sbjct: 177 -RRALQLGTPGA 187
>SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 463
Score = 28.7 bits (61), Expect = 5.3
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Frame = -1
Query: 569 KAIQQAPRSHDSLCILCADVREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKE--KQRFH 396
K ++A R A +EE K++ + A KK ER EKE K+R
Sbjct: 281 KQKEEAERKKQEKLEKLAKKKEELKERKRQEKLEQKA-KKKEKERQEREKEKEREKERIQ 339
Query: 395 EMAEQDKHRFDLEMQNYVPPKDMKVRGRKRQQMK 294
+ E+ K R + E Q + K+ K R R++++++
Sbjct: 340 QEKEKQKERREKEKQKHQEKKE-KERQREKEKLE 372
>SB_24733| Best HMM Match : Shugoshin_C (HMM E-Value=4.2)
Length = 689
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -2
Query: 493 RNTLMSVLYLQHSRKSAQRGGIQCRKKKNSGSMRW 389
+++++S LY++ R+ + G+Q RK K G W
Sbjct: 28 KSSILSTLYIEEGRQDIYKWGVQ-RKSKRKGIRGW 61
>SB_25340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1105
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +1
Query: 292 SFICCLFRPLTFMSFGGT*FCISKSNRCLSCSAISWNRCFS 414
SF+C R L +SF C+ RC SC+ W RC S
Sbjct: 29 SFLC--MRLLEKVSF----LCMRLLKRCHSCACACWKRCHS 63
>SB_29666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 400
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 672 QHYRGNLPLYRSCSNRHSSKLYSKQ 598
QH RGN P Y + R +K+ SKQ
Sbjct: 129 QHDRGNCPAYNAICRRCKAKVCSKQ 153
>SB_15976| Best HMM Match : Vicilin_N (HMM E-Value=5.7)
Length = 128
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 455 SKKCAERWNTMSEKEKQRFHEMAEQDKHR 369
S++C +RW M K+ QR + +D H+
Sbjct: 47 SQRCDKRWPNMRTKDDQRCAQKMTKDAHK 75
>SB_3457| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 848
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 479 HQGISSCVLLARLHKECISCHATAG 553
++G S LH EC+ CH AG
Sbjct: 599 NEGYSGTTCEVTLHTECMDCHVNAG 623
>SB_1582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 282 CIRVFHLLPLSPSDLHVLWW--YIVLHLQVESMLVLFSHLMEPLFFFFRHCIPPLCALFR 455
C ++ + P+ + ++ W YI+L Q+ S ++ FSH P P + L+R
Sbjct: 41 CRQILAMFPMMKILVRIINWVGYILLCCQIFSYVIYFSHKTPP-------PEPDMSPLWR 93
Query: 456 ECCKYNTDI 482
+C TD+
Sbjct: 94 KCHSQFTDV 102
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,614,704
Number of Sequences: 59808
Number of extensions: 471120
Number of successful extensions: 1732
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1725
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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