Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40154
         (749 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   5.3  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   5.3  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    22   7.1  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    22   7.1  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    22   7.1  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    22   7.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   7.1  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   9.3  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     21   9.3  

>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -1

Query: 551 PRSHDSLCILCAD 513
           PR  + LC++C D
Sbjct: 180 PRQQEELCLVCGD 192


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/29 (31%), Positives = 12/29 (41%)
 Frame = +3

Query: 165 PNVCRVPSQYRPWCTLGCQLSPSNVHRCK 251
           P V      + P C +     PSNV  C+
Sbjct: 143 PQVPYTVKNFHPRCAVNNYNDPSNVRNCE 171


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/55 (20%), Positives = 23/55 (41%)
 Frame = -1

Query: 509 REEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQDKHRFDLEMQNY 345
           RE  +  Y +    +  + +   ER     E+EK + H++     + ++    NY
Sbjct: 43  REREQNSYKNERE-YRKYRETSKERSRDRKEREKSKEHKIISSLSNNYNYNNNNY 96


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/55 (20%), Positives = 23/55 (41%)
 Frame = -1

Query: 509 REEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQDKHRFDLEMQNY 345
           RE  +  Y +    +  + +   ER     E+EK + H++     + ++    NY
Sbjct: 43  REREQNSYKNERE-YRKYRETSKERSRDRKEREKSKEHKIISSLSNNYNYNNNNY 96


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/55 (20%), Positives = 23/55 (41%)
 Frame = -1

Query: 509 REEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQDKHRFDLEMQNY 345
           RE  +  Y +    +  + +   ER     E+EK + H++     + ++    NY
Sbjct: 43  REREQNSYKNERE-YRKYRETSKERSRDRKEREKSKEHKIISSLSNNYNYNNNNY 96


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 502 SSRTSAQRMHKLSCDR 549
           S+ T+A R+H  SCDR
Sbjct: 125 SAITTAYRIHADSCDR 140


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/44 (20%), Positives = 21/44 (47%)
 Frame = -1

Query: 425 MSEKEKQRFHEMAEQDKHRFDLEMQNYVPPKDMKVRGRKRQQMK 294
           + ++  QR H +     H     +Q++  P   + + ++RQQ +
Sbjct: 133 IKQETLQRHHHLQNHHHHLQSTAVQDHHRPYQQQQQQQQRQQQR 176


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 347 SSASPSRIDACPVQPS 394
           SSA+P  I AC   P+
Sbjct: 20  SSANPGTIQACTTSPA 35


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 13/54 (24%), Positives = 21/54 (38%)
 Frame = -2

Query: 550 RGRMTAYAFFVQTCEKNTRRNTLMSVLYLQHSRKSAQRGGIQCRKKKNSGSMRW 389
           R  +T Y   ++  E       ++ + Y+ H       GGI  RKK+      W
Sbjct: 101 RDSVTKYLIHLKEIEDT---EPILLIAYIYHLYMGLLSGGIILRKKREFMQKIW 151


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,779
Number of Sequences: 438
Number of extensions: 4269
Number of successful extensions: 23
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)