Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40154
(749 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g28730.1 68416.m03587 structure-specific recognition protein ... 47 1e-05
At1g20693.1 68414.m02592 high mobility group protein beta1 (HMGb... 44 1e-04
At2g34450.1 68415.m04227 high mobility group (HMG1/2) family pro... 43 2e-04
At4g11080.1 68417.m01800 high mobility group (HMG1/2) family pro... 42 4e-04
At3g51880.2 68416.m05690 high mobility group protein alpha (HMGa... 40 0.002
At3g51880.1 68416.m05689 high mobility group protein alpha (HMGa... 40 0.002
At4g23800.1 68417.m03422 high mobility group (HMG1/2) family pro... 38 0.009
At1g20696.1 68414.m02593 high mobility group protein beta2 (HMGb... 36 0.022
At2g17560.1 68415.m02032 high mobility group protein gamma (HMGg... 35 0.050
At3g13350.1 68416.m01680 high mobility group (HMG1/2) family pro... 34 0.088
At1g04880.1 68414.m00485 high mobility group (HMG1/2) family pro... 34 0.088
At1g76110.1 68414.m08838 high mobility group (HMG1/2) family pro... 34 0.12
At4g00170.1 68417.m00018 vesicle-associated membrane family prot... 33 0.20
At4g35570.1 68417.m05054 high mobility group protein delta (HMGd... 31 0.62
At5g13550.1 68418.m01565 sulfate transporter family protein simi... 29 2.5
At3g14090.1 68416.m01781 exocyst subunit EXO70 family protein c... 29 2.5
At5g23420.1 68418.m02747 high mobility group (HMG1/2) family pro... 28 5.8
At2g27650.1 68415.m03351 ubiquitin carboxyl-terminal hydrolase-r... 28 5.8
At4g12460.1 68417.m01971 oxysterol-binding family protein simila... 28 7.6
>At3g28730.1 68416.m03587 structure-specific recognition protein 1 /
high mobility group protein / HMG protein nearly
identical to SP|Q05153 Structure-specific recognition
protein 1 homolog (HMG protein) {Arabidopsis thaliana};
contains Pfam profile PF00505: HMG (high mobility group)
box; contains Pfam profile PF03531: Structure-specific
recognition protein
Length = 646
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Frame = -3
Query: 342 TTKGHEG--QRAKEAADERP*CTKALAISILLFCNDERSKVKAGNPEYTMGDIAKELGRR 169
T EG +R K + P K + F ER +K +P G++ K LG +
Sbjct: 540 TVAADEGSSKRKKPKKKKDPNAPKRAMSGFMFFSQMERDNIKKEHPGIAFGEVGKVLGDK 599
Query: 168 WAAADPETKAKXDALSEKDKARYDREMTAYK 76
W + K +A ++ DK RY E++ YK
Sbjct: 600 WRQMSADDKEPYEAKAQVDKQRYKDEISDYK 630
>At1g20693.1 68414.m02592 high mobility group protein beta1
(HMGbeta1) / HMG protein beta1 nearly identical to HMG
protein (HMGbeta1) [Arabidopsis thaliana] GI:2832359
Length = 144
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = -3
Query: 342 TTKGHEGQRAKEAADERP*CTKALAISILLFCNDERSKVKAGNPEY-TMGDIAKELGRRW 166
T K +G +AA + P K A + +F D R K NP+ ++ + K G +W
Sbjct: 18 TKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKW 77
Query: 165 AAADPETKAKXDALSEKDKARYDREMTAYKK 73
+ KA A +EK K Y++ + AY K
Sbjct: 78 KSLSDSEKAPYVAKAEKRKVEYEKNIKAYNK 108
Score = 35.1 bits (77), Expect = 0.050
Identities = 17/32 (53%), Positives = 18/32 (56%)
Frame = -1
Query: 344 VPPKDMKVRGRKRQQMKDPNAPKRSLSAFFCF 249
V K K GR + KDPN PKR SAFF F
Sbjct: 17 VTKKPAKGAGRGKAAAKDPNKPKRPASAFFVF 48
>At2g34450.1 68415.m04227 high mobility group (HMG1/2) family
protein similar to HMG protein [Arabidopsis thaliana]
GI:2832361; contains Pfam profile PF00505: HMG (high
mobility group) box
Length = 151
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/57 (29%), Positives = 34/57 (59%)
Frame = -1
Query: 515 DVREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQDKHRFDLEMQNY 345
D R++++++ PDV + K C E+W TM+ +EK +++++A + + F M Y
Sbjct: 76 DFRKQYQEENPDVKSM-REIGKTCGEKWKTMTYEEKVKYYDIATEKREEFHRAMTEY 131
>At4g11080.1 68417.m01800 high mobility group (HMG1/2) family
protein similar to SP|P40618 High mobility group protein
HMG2A {Gallus gallus}; contains Pfam profile PF00505:
HMG (high mobility group) box
Length = 446
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/83 (30%), Positives = 42/83 (50%)
Frame = -3
Query: 321 QRAKEAADERP*CTKALAISILLFCNDERSKVKAGNPEYTMGDIAKELGRRWAAADPETK 142
++AK+ D P K + L++ N+ R+ +K N ++AK G W E K
Sbjct: 235 KKAKKIKD--PLKPKQPISAYLIYANERRAALKGENKSVI--EVAKMAGEEWKNLSEEKK 290
Query: 141 AKXDALSEKDKARYDREMTAYKK 73
A D +++K+K Y +EM YK+
Sbjct: 291 APYDQMAKKNKEIYLQEMEGYKR 313
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/90 (26%), Positives = 42/90 (46%)
Frame = -3
Query: 342 TTKGHEGQRAKEAADERP*CTKALAISILLFCNDERSKVKAGNPEYTMGDIAKELGRRWA 163
T + +G++ K+ E TK + +L+C D ++VK NPE + + LG +W
Sbjct: 113 TEEEKKGKKKKKDCAE----TKRPSTPYILWCKDNWNEVKKQNPEADFKETSNILGAKWK 168
Query: 162 AADPETKAKXDALSEKDKARYDREMTAYKK 73
E K + + DK Y + +T K+
Sbjct: 169 GISAEEKKPYEEKYQADKEAYLQVITKEKR 198
Score = 37.1 bits (82), Expect = 0.012
Identities = 14/52 (26%), Positives = 31/52 (59%)
Frame = -1
Query: 455 SKKCAERWNTMSEKEKQRFHEMAEQDKHRFDLEMQNYVPPKDMKVRGRKRQQ 300
+K E W +SE++K + +MA+++K + EM+ Y K+ + +K+++
Sbjct: 275 AKMAGEEWKNLSEEKKAPYDQMAKKNKEIYLQEMEGYKRTKEEEAMSQKKEE 326
Score = 31.1 bits (67), Expect = 0.82
Identities = 16/71 (22%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = -1
Query: 452 KKCAERWNTMSEKEKQRFHEMAEQDKHRFDLEMQ---NYVPPKDMKVRGRKRQQMKDPNA 282
K+ E +KE++ F ++ +Q+ + + + N + + +K+ + DPN
Sbjct: 312 KRTKEEEAMSQKKEEEEFMKLHKQEALQLLKKKEKTDNIIKKTKETAKNKKKNENVDPNK 371
Query: 281 PKRSLSAFFCF 249
PK+ S++F F
Sbjct: 372 PKKPTSSYFLF 382
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/64 (23%), Positives = 25/64 (39%)
Frame = -3
Query: 264 SILLFCNDERSKVKAGNPEYTMGDIAKELGRRWAAADPETKAKXDALSEKDKARYDREMT 85
S LFC D R V +P + + +W E K ++ + + Y +E+
Sbjct: 378 SYFLFCKDARKSVLEEHPGINNSTVTAHISLKWMELGEEEKQVYNSKAAELMEAYKKEVE 437
Query: 84 AYKK 73
Y K
Sbjct: 438 EYNK 441
>At3g51880.2 68416.m05690 high mobility group protein alpha
(HMGalpha) / HMG protein alpha nearly identical to HMG
protein (HMGalpha) [Arabidopsis thaliana] GI:2832357;
contains Pfam profile PF00505: HMG (high mobility group)
box
Length = 185
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = -3
Query: 318 RAKEAADERP*CTKALAISILLFCNDERSKVKAGNPEY-TMGDIAKELGRRWAAADPETK 142
R ++ A + P K + +F D R K NP + + K G++W + K
Sbjct: 41 RKEKKAKKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEK 100
Query: 141 AKXDALSEKDKARYDREMTAYKK 73
A + + K KA Y+++M AY K
Sbjct: 101 APYEEKAAKRKAEYEKQMDAYNK 123
>At3g51880.1 68416.m05689 high mobility group protein alpha
(HMGalpha) / HMG protein alpha nearly identical to HMG
protein (HMGalpha) [Arabidopsis thaliana] GI:2832357;
contains Pfam profile PF00505: HMG (high mobility group)
box
Length = 178
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = -3
Query: 318 RAKEAADERP*CTKALAISILLFCNDERSKVKAGNPEY-TMGDIAKELGRRWAAADPETK 142
R ++ A + P K + +F D R K NP + + K G++W + K
Sbjct: 41 RKEKKAKKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEK 100
Query: 141 AKXDALSEKDKARYDREMTAYKK 73
A + + K KA Y+++M AY K
Sbjct: 101 APYEEKAAKRKAEYEKQMDAYNK 123
>At4g23800.1 68417.m03422 high mobility group (HMG1/2) family
protein similar to HMG2B [Homo sapiens] GI:32335;
contains Pfam profile PF00505: HMG (high mobility group)
box
Length = 456
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = -3
Query: 282 TKALAISILLFCNDERSKVKAGNPEYTMGDIAKELGRRWAAADPETKAKXDALSEKDKAR 103
TK + S +L+C D+ ++VK NPE + + LG +W + E K + + +K
Sbjct: 138 TKRPSSSYVLWCKDQWTEVKKENPEADFKETSNILGAKWKSLSAEDKKPYEERYQVEKEA 197
Query: 102 Y 100
Y
Sbjct: 198 Y 198
Score = 35.9 bits (79), Expect = 0.029
Identities = 19/88 (21%), Positives = 41/88 (46%)
Frame = -3
Query: 336 KGHEGQRAKEAADERP*CTKALAISILLFCNDERSKVKAGNPEYTMGDIAKELGRRWAAA 157
+ + + K ++ P K + L++ N+ R+ ++ N ++AK G W
Sbjct: 237 EAEQDNKKKNKKEKDPLKPKHPVSAFLVYANERRAALREENKSVV--EVAKITGEEWKNL 294
Query: 156 DPETKAKXDALSEKDKARYDREMTAYKK 73
+ KA + +++K+K Y + M YK+
Sbjct: 295 SDKKKAPYEKVAKKNKETYLQAMEEYKR 322
Score = 34.3 bits (75), Expect = 0.088
Identities = 22/88 (25%), Positives = 34/88 (38%)
Frame = -3
Query: 336 KGHEGQRAKEAADERP*CTKALAISILLFCNDERSKVKAGNPEYTMGDIAKELGRRWAAA 157
K + + K+ + P K A S LF DER K+ P + + +W
Sbjct: 361 KKEKATKKKKNENVDPNKPKKPASSYFLFSKDERKKLTEERPGTNNATVTALISLKWKEL 420
Query: 156 DPETKAKXDALSEKDKARYDREMTAYKK 73
E K + + K Y +E+ AY K
Sbjct: 421 SEEEKQVYNGKAAKLMEAYKKEVEAYNK 448
>At1g20696.1 68414.m02593 high mobility group protein beta2
(HMGbeta2) / HMG protein beta2 nearly identical to HMG
protein (HMGbeta2) [Arabidopsis thaliana] GI:2832361
Length = 141
Score = 36.3 bits (80), Expect = 0.022
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = -3
Query: 315 AKEAADERP*CTKALAISILLFCNDERSKVKAGNPEY-TMGDIAKELGRRWAAADPETKA 139
AK AA + P K + + +F D R K +P+ ++ + K G +W + KA
Sbjct: 25 AKGAAKD-PNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSDSEKA 83
Query: 138 KXDALSEKDKARYDREMTAYKK 73
A ++K K Y++ M AY K
Sbjct: 84 PYVAKADKRKVEYEKNMKAYNK 105
>At2g17560.1 68415.m02032 high mobility group protein gamma
(HMGgamma) / HMG protein gamma nearly identical to HMG
protein (HMGgamma) [Arabidopsis thaliana] GI:2832355
Length = 138
Score = 35.1 bits (77), Expect = 0.050
Identities = 17/29 (58%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = -1
Query: 329 MKVRGRK--RQQMKDPNAPKRSLSAFFCF 249
+K RGRK ++ KDPN PKR SAFF F
Sbjct: 17 LKTRGRKAGKKTKKDPNQPKRPPSAFFVF 45
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/71 (23%), Positives = 29/71 (40%)
Frame = -1
Query: 557 QAPRSHDSLCILCADVREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQD 378
Q R + + D R+E P+ + A K RW M++++K + AE
Sbjct: 34 QPKRPPSAFFVFLEDFRKEFNLANPNNKSV-ATVGKAAGARWKAMTDEDKAPYVAKAESR 92
Query: 377 KHRFDLEMQNY 345
K + +Q Y
Sbjct: 93 KTEYIKNVQQY 103
>At3g13350.1 68416.m01680 high mobility group (HMG1/2) family
protein / ARID/BRIGHT DNA-binding domain-containing
protein low similarity to Dead Ringer Protein Chain A
Dna-Binding Domain (GI:6573608), Arid-Dna Complex
(GI:20150982) from [Drosophila melanogaster]; contains
Pfam profiles PF00505: HMG (high mobility group) box,
PF01388: ARID/BRIGHT DNA binding domain
Length = 319
Score = 34.3 bits (75), Expect = 0.088
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = -1
Query: 506 EEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQDKHRFDLEMQNY 345
E++ + P+ + +KK W+ ++E EKQ + + +D R+ +EM Y
Sbjct: 251 EQYARLKPEYHGQERSITKKIGHMWSNLTESEKQVYQDKGVKDVERYRIEMLEY 304
>At1g04880.1 68414.m00485 high mobility group (HMG1/2) family
protein / ARID/BRIGHT DNA-binding domain-containing
protein low similarity to SP|O15347|HMG4_HUMAN High
mobility group protein 4 (HMG-4) (High mobility group
protein 2a) (HMG-2a) {Homo sapiens}; contains Pfam
profiles PF00505: HMG (high mobility group) box,
PF01388: ARID/BRIGHT DNA binding domain
Length = 448
Score = 34.3 bits (75), Expect = 0.088
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -1
Query: 455 SKKCAERWNTMSEKEKQRFHEMAEQDKHRFDLEMQNY 345
S+ E WN ++E EK + A +DK R+ EM++Y
Sbjct: 293 SRMIGELWNKLNEDEKLIYQGKAMEDKERYRTEMEDY 329
>At1g76110.1 68414.m08838 high mobility group (HMG1/2) family
protein / ARID/BRIGHT DNA-binding domain-containing
protein low similarity to high mobility group protein
[Plasmodium falciparum] GI:790198; contains Pfam
profiles PF00505: HMG (high mobility group) box,
PF01388: ARID/BRIGHT DNA binding domain
Length = 338
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/84 (25%), Positives = 35/84 (41%)
Frame = -3
Query: 324 GQRAKEAADERP*CTKALAISILLFCNDERSKVKAGNPEYTMGDIAKELGRRWAAADPET 145
G+R + E P K F ++ K+K+ P + K +G W+ E
Sbjct: 241 GKRRRSRRREDPNYPKPNRSGYNFFFAEKHCKLKSLYPNKER-EFTKLIGESWSNLSTEE 299
Query: 144 KAKXDALSEKDKARYDREMTAYKK 73
+ + KDK RY RE+ Y++
Sbjct: 300 RMVYQDIGLKDKERYQRELNEYRE 323
Score = 32.3 bits (70), Expect = 0.35
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = -1
Query: 458 FSKKCAERWNTMSEKEKQRFHEMAEQDKHRFDLEMQNY 345
F+K E W+ +S +E+ + ++ +DK R+ E+ Y
Sbjct: 284 FTKLIGESWSNLSTEERMVYQDIGLKDKERYQRELNEY 321
>At4g00170.1 68417.m00018 vesicle-associated membrane family protein
/ VAMP family protein similar to VAP27 GI:6688926
[Nicotiana plumbaginifolia]
Length = 239
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = -1
Query: 515 DVREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQDKHRFDLEM 354
D+ + + DVS F S+K +E W+ +S+ +++ + K R +LEM
Sbjct: 151 DIASQSASLFDDVSRTFEETSEKSSEAWSMISKLTEEKTSATQQSQKLRLELEM 204
>At4g35570.1 68417.m05054 high mobility group protein delta
(HMGdelta) / HMG protein delta identical to HMG protein
(HMGdelta) [Arabidopsis thaliana] GI:2832363
Length = 125
Score = 31.5 bits (68), Expect = 0.62
Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -1
Query: 329 MKVRGRK-RQQMKDPNAPKRSLSAFFCF 249
+KVRG K ++ KDPN PK+ S FF F
Sbjct: 17 LKVRGNKVGKKTKDPNRPKKPPSPFFVF 44
Score = 31.1 bits (67), Expect = 0.82
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = -1
Query: 515 DVREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQDKHRFDLEMQNY 345
D R+E PD + + ++W TM+E+E+ F ++ K + + MQ Y
Sbjct: 47 DFRKEFNLANPDNKSV-GNVGRAAGKKWKTMTEEERAPFVAKSQSKKTEYAVTMQQY 102
>At5g13550.1 68418.m01565 sulfate transporter family protein similar
to sulfate transporter [Arabidopsis thaliana]
GI:3777483; contains Pfam profiles PF00916: Sulfate
transporter family, PF01740: STAS domain
Length = 685
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +2
Query: 104 RALSFSDSASYLA-LVSGSAAAQRL-PSSFAISPMVYSGLPAFTFERSSLQNKRMLIASA 277
+ L F +A+ L +V G+ A+ P S ++ + GLP F+F RS K +L SA
Sbjct: 279 KELQFLRAAAPLTGIVLGTTIAKVFHPPSISLVGEIPQGLPTFSFPRSFDHAKTLLPTSA 338
Query: 278 LV 283
L+
Sbjct: 339 LI 340
>At3g14090.1 68416.m01781 exocyst subunit EXO70 family protein
contains Pfam domain PF03081: Exo70 exocyst complex
subunit;
Length = 623
Score = 29.5 bits (63), Expect = 2.5
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 312 SPSDLHVLWWYIVLHLQVE 368
SP DLH++W +VLH +E
Sbjct: 425 SPLDLHLIWLIVVLHFNLE 443
>At5g23420.1 68418.m02747 high mobility group (HMG1/2) family
protein similar to high mobility group protein 2 HMG2
[Ipomoea nil] GI:1052956; contains Pfam profile PF00505:
HMG (high mobility group) box
Length = 241
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 338 PKDMKVRGRKRQQMKDPNAPKRSLSAFFCF 249
PK +K +++ N PKR L+AFF F
Sbjct: 96 PKRLKKTNDEKKSSSTSNKPKRPLTAFFIF 125
>At2g27650.1 68415.m03351 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF04780:
Protein of unknown function (DUF629), PF04781: Protein
of unknown function (DUF627)
Length = 1106
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -2
Query: 508 EKNTRRNTLMSVLYLQHSRKSAQRGGIQCRKKKNSGSMRWLNRTSIDS 365
E + + ++ L L+ +K+ + IQ +KKKN+ R N TS+ S
Sbjct: 704 ESKAKSDAAVADLLLEEEKKNPKPSPIQSKKKKNTSKKR--NSTSMSS 749
>At4g12460.1 68417.m01971 oxysterol-binding family protein similar
to SP|P22059 Oxysterol-binding protein 1 {Homo sapiens};
contains Pfam profiles PF00169: PH domain, PF01237:
Oxysterol-binding protein
Length = 694
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/64 (23%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = -1
Query: 449 KCAERWNTMSEKEKQRFHEMAEQDKHRFDLEMQNYVPPK--DMKVRGRKRQQMKDPNAPK 276
K +E + S +KQ F +++E+D+ F +++ P + ++R ++ DP +
Sbjct: 261 KYSECSTSASSDDKQEFEDISEEDEASFHDTKESFGEPDVGSVLTHFKRRTKLPDPAEKE 320
Query: 275 RSLS 264
R +S
Sbjct: 321 RGVS 324
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,567,443
Number of Sequences: 28952
Number of extensions: 317434
Number of successful extensions: 1058
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1050
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1663169840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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