Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40153
         (635 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   1.9  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   3.3  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              21   7.6  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   7.6  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 326 LTFNIGEDFFAWRPREDEKDDTASTKDAKAQQIQLIIK 439
           L F+I +D   WR R  E   T S  + + ++IQL  K
Sbjct: 303 LNFDI-QDLERWRDRIYEAIHTGSVINTRGERIQLTEK 339


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = +1

Query: 511 NKRIDKHKDLSSFDRSRIRHVSGDGNIDQRQEDSFR 618
           N+ +DKH +  +  + R +  SG+G I  +  +  +
Sbjct: 384 NESVDKHPNRRARGQLRTKIESGEGTIPVKSSEGIQ 419


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 580 DGNIDQRQEDSFR 618
           D  ID+++ED FR
Sbjct: 36  DSGIDEKKEDDFR 48


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 90  ERGADRKVNELLRDDSRENWD 152
           ER +DR+ NE+L  D  ++ D
Sbjct: 280 ERPSDRQRNEILLSDELDSVD 300


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,568
Number of Sequences: 438
Number of extensions: 2581
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)