Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40152
         (742 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    25   0.85 
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    25   0.85 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   3.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   3.4  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   4.5  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           22   6.0  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   6.0  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
 Frame = -3

Query: 626 EMSNPSRNIISEALA-LANIASPGSNPKESSA*SGQVPAYN*I*DDFYHFSNKVISIDVK 450
           EM NP    ++EA   + N   P       S   G+   Y      +Y+  N   S +  
Sbjct: 315 EMYNPEHTTVNEAQPYVRNTTVPTQGVARMSR--GRQYNYPNPQQQYYYNKNHPNSENYI 372

Query: 449 RHQIHVLMTRGQHPVY 402
            HQ +V   +G+HP Y
Sbjct: 373 NHQNYVQGYQGEHPNY 388


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
 Frame = -3

Query: 626 EMSNPSRNIISEALA-LANIASPGSNPKESSA*SGQVPAYN*I*DDFYHFSNKVISIDVK 450
           EM NP    ++EA   + N   P       S   G+   Y      +Y+  N   S +  
Sbjct: 263 EMYNPEHTTVNEAQPYVRNTTVPTQGVARMSR--GRQYNYPNPQQQYYYNKNHPNSENYI 320

Query: 449 RHQIHVLMTRGQHPVY 402
            HQ +V   +G+HP Y
Sbjct: 321 NHQNYVQGYQGEHPNY 336


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +1

Query: 1   QILVFISTVVKCKRNDDTYYFSCLVLFFCIATTEILVSSQTLVN 132
           Q+ +  S V KC      YYF C+ + F +    +L S    V+
Sbjct: 39  QVGILDSLVFKCYNLRRIYYFYCVSITFNVHLLFLLCSGYFTVH 82


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -2

Query: 738 FPLEGYPNASVEPEMGWTVAAGGTP 664
           FP   YP   + PEM    A+  TP
Sbjct: 167 FPAGQYPYPILSPEMSQVAASWHTP 191


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -2

Query: 738 FPLEGYPNASVEPEMGWTVAAGGTP 664
           FP   YP   + PEM    A+  TP
Sbjct: 59  FPAGQYPYPILSPEMSQVAASWHTP 83


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/39 (23%), Positives = 21/39 (53%)
 Frame = +1

Query: 166 LMICTLNHLDKNAILLLQHSLVVWIHVSTF*MWK*SKNF 282
           +   TL+ LD    ++ + + V ++H++   + +  KNF
Sbjct: 226 IFFATLDFLDNVDTIMYEKTNVTFVHLAVLNILRVGKNF 264


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 123 TCKSKLNELPSFATLDDLHLKPS 191
           T  S  + +PS +T DDL   P+
Sbjct: 124 TVSSSTSSIPSPSTTDDLSTNPT 146


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 491 FYHFSNKVISIDVKRHQIHVLM 426
           F  F NK+I  DVK   + +++
Sbjct: 102 FIEFINKLIEFDVKLQNVSLII 123


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,605
Number of Sequences: 336
Number of extensions: 4354
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)