Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40151
(753 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55282| Best HMM Match : No HMM Matches (HMM E-Value=.) 96 2e-20
SB_47801| Best HMM Match : An_peroxidase (HMM E-Value=0) 76 3e-14
SB_24473| Best HMM Match : An_peroxidase (HMM E-Value=0) 73 3e-13
SB_26887| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 7e-12
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_30003| Best HMM Match : DUF906 (HMM E-Value=0) 29 3.1
SB_52562| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_30809| Best HMM Match : Mab-21 (HMM E-Value=0) 28 7.1
SB_15344| Best HMM Match : Phage_30_3 (HMM E-Value=1.1) 28 7.1
SB_6982| Best HMM Match : Plasmodium_HRP (HMM E-Value=5.5) 28 7.1
SB_37948| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_51200| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_51018| Best HMM Match : RVT_1 (HMM E-Value=5.8e-17) 28 9.4
SB_49457| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_36850| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_12598| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_2895| Best HMM Match : RnaseH (HMM E-Value=3.1) 28 9.4
SB_53754| Best HMM Match : M-factor (HMM E-Value=5.8) 28 9.4
SB_50204| Best HMM Match : rve (HMM E-Value=6.6e-22) 28 9.4
SB_47235| Best HMM Match : RVT_1 (HMM E-Value=4.5e-17) 28 9.4
SB_42289| Best HMM Match : RVT_1 (HMM E-Value=5.2e-17) 28 9.4
SB_34611| Best HMM Match : rve (HMM E-Value=6.6e-22) 28 9.4
SB_27267| Best HMM Match : RVT_1 (HMM E-Value=5.6e-17) 28 9.4
SB_27043| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_25628| Best HMM Match : RVT_1 (HMM E-Value=0.17) 28 9.4
SB_13046| Best HMM Match : La (HMM E-Value=5e-23) 28 9.4
SB_11383| Best HMM Match : rve (HMM E-Value=2.3e-18) 28 9.4
>SB_55282| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1565
Score = 96.3 bits (229), Expect = 2e-20
Identities = 45/85 (52%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 EISDKEVRDKLQELY-GSVHNIDVWVGGILEDQVEGGKVGPLFRCLLMEQFVRLRDGDRF 179
EI D R L +Y GSV D+WV G+ E+ V+G VGP F C+L QF RLRDGDRF
Sbjct: 1116 EIRDPVTRQILDRVYNGSVEFADLWVSGLAENPVKGASVGPTFLCILRSQFRRLRDGDRF 1175
Query: 180 WYENPSVFKPDQLRQIKETSLARIL 254
WYEN VF +QL +IK+ SL+R++
Sbjct: 1176 WYENNGVFGKEQLEEIKKISLSRVM 1200
>SB_47801| Best HMM Match : An_peroxidase (HMM E-Value=0)
Length = 1263
Score = 76.2 bits (179), Expect = 3e-14
Identities = 43/91 (47%), Positives = 55/91 (60%)
Frame = +3
Query: 3 EISDKEVRDKLQELYGSVHNIDVWVGGILEDQVEGGKVGPLFRCLLMEQFVRLRDGDRFW 182
EI+ E K E+Y SV ++D+WVGG+ E+ VEGG VG F ++ QF LRDGDRFW
Sbjct: 1115 EITPDENTLKKFEVYPSVDDVDLWVGGLAEEHVEGGCVGETFARIIAMQFKVLRDGDRFW 1174
Query: 183 YENPSVFKPDQLRQIKETSLARILVTMAIIL 275
YENP + LR T L +VTM +L
Sbjct: 1175 YENPDTMVYN-LRD--RTRLPTKVVTMNEVL 1202
>SB_24473| Best HMM Match : An_peroxidase (HMM E-Value=0)
Length = 647
Score = 72.9 bits (171), Expect = 3e-13
Identities = 30/57 (52%), Positives = 43/57 (75%)
Frame = +3
Query: 3 EISDKEVRDKLQELYGSVHNIDVWVGGILEDQVEGGKVGPLFRCLLMEQFVRLRDGD 173
EIS ++R +L++LY N+D+W+ G+LED GG+VG +F C+L+EQF RLRDGD
Sbjct: 590 EISSADIRARLEKLYKDPSNVDLWLAGLLEDLEPGGQVGKVFSCILVEQFKRLRDGD 646
>SB_26887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 284
Score = 68.1 bits (159), Expect = 7e-12
Identities = 28/55 (50%), Positives = 41/55 (74%)
Frame = +3
Query: 3 EISDKEVRDKLQELYGSVHNIDVWVGGILEDQVEGGKVGPLFRCLLMEQFVRLRD 167
EIS ++R +L++LY N+D+W+ G+LED GG+VG +F C+L+EQF RLRD
Sbjct: 46 EISSADIRARLEKLYKDPSNVDLWLAGLLEDLEPGGQVGKVFSCILVEQFKRLRD 100
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 377 ESCNFDLDTEREKRRARRDVDSNITNGRFNKLEHLQNDLVH-TIECLRKESKYSKL 541
ES N DLD E+R D + N++EHL+ND + T+E + + S+L
Sbjct: 1268 ESANEDLDVLCEQRSGEIDALRQELVDKTNEVEHLRNDFENQTLELKDVQQRSSEL 1323
>SB_30003| Best HMM Match : DUF906 (HMM E-Value=0)
Length = 2276
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 317 DGLVSCEDLPSMDLRFWADC-ESCNFDLDTEREKRRA 424
DGL + ++LP D FW + E +LD E E+R+A
Sbjct: 1260 DGLTNPKELPYFDGDFWPNALEDSIRELDQEEEERKA 1296
>SB_52562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1490
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 402 VSRSKLQDSQSAQKRRSIDGKSSQDTSPSCTSGK*NT 292
+ RS QDS+ RRS+D K ++ P TS K +T
Sbjct: 1199 IERSSPQDSKKRSTRRSLDRKQDKN-PPQTTSSKTST 1234
>SB_30809| Best HMM Match : Mab-21 (HMM E-Value=0)
Length = 1710
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 75 VGGILEDQVEGGKVGPLFRCLLMEQFVRLRDGDRFWYENPSV 200
VG ILE+ V LFR LL F R+G R W + ++
Sbjct: 512 VGVILEEHRVTDTVFSLFRMLLHHAFQEEREGWRIWVDTLAI 553
>SB_15344| Best HMM Match : Phage_30_3 (HMM E-Value=1.1)
Length = 367
Score = 28.3 bits (60), Expect = 7.1
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +2
Query: 446 ITNGRFNK-LEHLQNDLVHTIECLRKES-KYSKLP--VKRTILFLSVMNFHSRKSKLVMY 613
+ N F K +E+++N + + C KE+ K + +P RTI +++ H +K+KLV
Sbjct: 107 MNNSVFGKTMENIENRVDVRLVCDEKEAMKLAAMPNYESRTIFDENLIAIHMKKTKLVYN 166
Query: 614 STYILYF*CFNIRTTLLH 667
L +I TL++
Sbjct: 167 KPIYLGMCILDISKTLMY 184
>SB_6982| Best HMM Match : Plasmodium_HRP (HMM E-Value=5.5)
Length = 389
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 267 IILIQLAKTYFTYRKYKMGLYLVKICHQWIF 359
++ I + T ++ Y++GL L K+ HQW F
Sbjct: 219 VLEIIIKTTLLSFEIYEIGLLLNKLIHQWRF 249
>SB_37948| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = -2
Query: 461 SGRL*YWNQHLFELAASLSLYQDQNYKIHSQPRNEDPLMANLHKIQAHLVLPVSKIRFR 285
+G YW +A S L+ D K + MAN+ K+ H LP ++R+R
Sbjct: 109 AGDFKYWQDLKSVMAPSSLLFVDVANKYKNDSPRSSQAMANMKKLLGH--LPELRVRYR 165
>SB_51200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 938
Score = 27.9 bits (59), Expect = 9.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -1
Query: 573 TERKSIVRFTGSFEYFDSFLKH 508
T++ I+RF G+ Y D F++H
Sbjct: 343 TDKDGILRFLGTVNYLDKFIEH 364
>SB_51018| Best HMM Match : RVT_1 (HMM E-Value=5.8e-17)
Length = 635
Score = 27.9 bits (59), Expect = 9.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -1
Query: 573 TERKSIVRFTGSFEYFDSFLKH 508
T++ I+RF G+ Y D F++H
Sbjct: 391 TDKDGILRFLGTVNYLDKFIEH 412
>SB_49457| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 27.9 bits (59), Expect = 9.4
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +3
Query: 123 LFRCLLMEQFVRLRDGDRFWYENPSVFKPDQLR-QIKETSLARILVTMAIILIQLAKTYF 299
L+R L + ++ G RF YE +KP ++ ET +LV A+++ Q ++
Sbjct: 494 LWRTLKKKDDDEVKQGMRFLYEG---YKPRFFYWEMIETYRKLVLVVSAVLMDQESRLNL 550
Query: 300 TYRKYKMGLYLVKICH 347
G+Y V CH
Sbjct: 551 GVPSIVSGVYAVFFCH 566
>SB_36850| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1008
Score = 27.9 bits (59), Expect = 9.4
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Frame = -1
Query: 615 EYMTNLLFLEWKFITERKSIVRFTGSFEYFDSFLKHSMVCTKSFCKCSNLLKRPFVILES 436
E MT+ LE + E K+++R S E +++ + TKS + F++L S
Sbjct: 353 EEMTSKELLE---VMEHKTVLREENSAEAQGDWVQVPLNKTKSESCSVGFQNQAFLVLSS 409
Query: 435 TSLRARRFSLSVSRSKLQDSQSA---QKRRSID 346
+ + R S+ + SQSA KR+S D
Sbjct: 410 SDMENRDMSVENVSQEQHLSQSAPDLHKRKSFD 442
>SB_12598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 799
Score = 27.9 bits (59), Expect = 9.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -1
Query: 573 TERKSIVRFTGSFEYFDSFLKH 508
T++ I+RF G+ Y D F++H
Sbjct: 315 TDKDGILRFLGTVNYLDKFIEH 336
>SB_2895| Best HMM Match : RnaseH (HMM E-Value=3.1)
Length = 342
Score = 27.9 bits (59), Expect = 9.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -1
Query: 573 TERKSIVRFTGSFEYFDSFLKH 508
T++ I+RF G+ Y D F++H
Sbjct: 130 TDKDGILRFLGTVNYLDKFIEH 151
>SB_53754| Best HMM Match : M-factor (HMM E-Value=5.8)
Length = 412
Score = 27.9 bits (59), Expect = 9.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -1
Query: 573 TERKSIVRFTGSFEYFDSFLKH 508
T++ I+RF G+ Y D F++H
Sbjct: 20 TDKDGILRFLGTVNYLDKFIEH 41
>SB_50204| Best HMM Match : rve (HMM E-Value=6.6e-22)
Length = 800
Score = 27.9 bits (59), Expect = 9.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -1
Query: 573 TERKSIVRFTGSFEYFDSFLKH 508
T++ I+RF G+ Y D F++H
Sbjct: 391 TDKDGILRFLGTVNYLDKFIEH 412
>SB_47235| Best HMM Match : RVT_1 (HMM E-Value=4.5e-17)
Length = 378
Score = 27.9 bits (59), Expect = 9.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -1
Query: 573 TERKSIVRFTGSFEYFDSFLKH 508
T++ I+RF G+ Y D F++H
Sbjct: 212 TDKDGILRFLGTVNYLDKFIEH 233
>SB_42289| Best HMM Match : RVT_1 (HMM E-Value=5.2e-17)
Length = 429
Score = 27.9 bits (59), Expect = 9.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -1
Query: 573 TERKSIVRFTGSFEYFDSFLKH 508
T++ I+RF G+ Y D F++H
Sbjct: 297 TDKDGILRFLGTVNYLDKFIEH 318
>SB_34611| Best HMM Match : rve (HMM E-Value=6.6e-22)
Length = 875
Score = 27.9 bits (59), Expect = 9.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -1
Query: 573 TERKSIVRFTGSFEYFDSFLKH 508
T++ I+RF G+ Y D F++H
Sbjct: 212 TDKDGILRFLGTVNYLDKFIEH 233
>SB_27267| Best HMM Match : RVT_1 (HMM E-Value=5.6e-17)
Length = 649
Score = 27.9 bits (59), Expect = 9.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -1
Query: 573 TERKSIVRFTGSFEYFDSFLKH 508
T++ I+RF G+ Y D F++H
Sbjct: 615 TDKDGILRFLGTVNYLDKFIEH 636
>SB_27043| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 27.9 bits (59), Expect = 9.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -1
Query: 573 TERKSIVRFTGSFEYFDSFLKH 508
T++ I+RF G+ Y D F++H
Sbjct: 153 TDKDGILRFLGTVNYLDKFIEH 174
>SB_25628| Best HMM Match : RVT_1 (HMM E-Value=0.17)
Length = 526
Score = 27.9 bits (59), Expect = 9.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -1
Query: 573 TERKSIVRFTGSFEYFDSFLKH 508
T++ I+RF G+ Y D F++H
Sbjct: 258 TDKDGILRFLGTVNYLDKFIEH 279
>SB_13046| Best HMM Match : La (HMM E-Value=5e-23)
Length = 442
Score = 27.9 bits (59), Expect = 9.4
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = -1
Query: 462 KRPFVILESTSLRARRFSLSVS---RSKLQDSQSAQKRRSIDGKSSQDTSPSCTSGK 301
KR I + T ++ RR S S S SKL SQS +KRR ++S D++ + + K
Sbjct: 160 KREPSIDDKTKIKKRRRSHSESDLESSKLSLSQSERKRRRTTSETSVDSNENASPFK 216
>SB_11383| Best HMM Match : rve (HMM E-Value=2.3e-18)
Length = 1003
Score = 27.9 bits (59), Expect = 9.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -1
Query: 573 TERKSIVRFTGSFEYFDSFLKH 508
T++ I+RF G+ Y D F++H
Sbjct: 399 TDKDGILRFLGTVNYLDKFIEH 420
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,769,937
Number of Sequences: 59808
Number of extensions: 443245
Number of successful extensions: 1231
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1222
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2046258890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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